RNA–Protein interactions for RNA: ENST00000622494.1

RPRD1B-209, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-209ENST00000622494 RIMBP3CA6NJZ7 1639 aa8.9□□□□□ -0.99
RPRD1B-209ENST00000622494 RIMBP3BA6NNM3 1639 aa8.9□□□□□ -0.99
RPRD1B-209ENST00000622494 RIMBP3Q9UFD9 1639 aa8.9□□□□□ -0.99
RPRD1B-209ENST00000622494 TTLL13PA6NNM8 815 aa8.89□□□□□ -0.99
RPRD1B-209ENST00000622494 STK25O00506 426 aa8.89□□□□□ -0.99
RPRD1B-209ENST00000622494 BCL11BQ9C0K0 894 aaPredicted RBP8.89□□□□□ -0.99
RPRD1B-209ENST00000622494 PBRM1Q86U86 1689 aa8.88□□□□□ -0.99
RPRD1B-209ENST00000622494 ASTLQ6HA08 431 aaPredicted RBP8.88□□□□□ -0.99
RPRD1B-209ENST00000622494 TMEM106CQ9BVX2 250 aa8.88□□□□□ -0.99
RPRD1B-209ENST00000622494 SNAPC4Q5SXM2 1469 aa8.88□□□□□ -0.99
RPRD1B-209ENST00000622494 ATMINO43313 823 aaPredicted RBP8.86□□□□□ -0.99
RPRD1B-209ENST00000622494 STK24Q9Y6E0 443 aa8.86□□□□□ -0.99
RPRD1B-209ENST00000622494 BBXQ8WY36 941 aaPredicted RBP8.85□□□□□ -0.99
RPRD1B-209ENST00000622494 ABCA5Q8WWZ7 1642 aa8.84□□□□□ -0.99
RPRD1B-209ENST00000622494 BIVM-ERCC5R4GMW8 1640 aa8.84□□□□□ -0.99
RPRD1B-209ENST00000622494 POTEIP0CG38 1075 aa8.84□□□□□ -0.99
RPRD1B-209ENST00000622494 ATN1P54259 1190 aaPredicted RBP8.84□□□□□ -0.99
RPRD1B-209ENST00000622494 ARHGEF11O15085 1522 aa8.84□□□□□ -0.99
RPRD1B-209ENST00000622494 TOP2BQ02880 1626 aa8.83□□□□□ -1
RPRD1B-209ENST00000622494 NKX1-1Q15270 411 aaPredicted RBP8.82□□□□□ -1
RPRD1B-209ENST00000622494 CABP2Q9NPB3 220 aa8.82□□□□□ -1
RPRD1B-209ENST00000622494 DCBLD2Q96PD2 775 aa8.81□□□□□ -1
RPRD1B-209ENST00000622494 TRIM35Q9UPQ4 493 aa8.81□□□□□ -1
RPRD1B-209ENST00000622494 WRNQ14191 1432 aaPredicted RBP eCLIP8.8□□□□□ -1
RPRD1B-209ENST00000622494 GAPVD1Q14C86 1478 aa8.8□□□□□ -1
RPRD1B-209ENST00000622494 CLASP1Q7Z460 1538 aa8.8□□□□□ -1
RPRD1B-209ENST00000622494 ABCA10Q8WWZ4 1543 aa8.8□□□□□ -1
RPRD1B-209ENST00000622494 ERCC6L2Q5T890 1561 aa8.79□□□□□ -1
RPRD1B-209ENST00000622494 GRIN2BQ13224 1484 aa8.79□□□□□ -1
RPRD1B-209ENST00000622494 ARAP1Q96P48 1450 aa8.79□□□□□ -1
RPRD1B-209ENST00000622494 PELP1Q8IZL8 1130 aaKnown RBP8.79□□□□□ -1
RPRD1B-209ENST00000622494 EFCAB3Q8N7B9 438 aa8.79□□□□□ -1
RPRD1B-209ENST00000622494 SOX12O15370 315 aa8.78□□□□□ -1
RPRD1B-209ENST00000622494 ILDR1Q86SU0 546 aaPredicted RBP8.78□□□□□ -1
RPRD1B-209ENST00000622494 ADAMTS12P58397 1594 aa8.78□□□□□ -1
RPRD1B-209ENST00000622494 IER5LQ5T953 404 aa8.77□□□□□ -1.01
RPRD1B-209ENST00000622494 MFRPQ9BY79 579 aa8.76□□□□□ -1.01
RPRD1B-209ENST00000622494 MAGI1Q96QZ7 1491 aaPredicted RBP8.76□□□□□ -1.01
RPRD1B-209ENST00000622494 CEP170Q5SW79 1584 aa8.75□□□□□ -1.01
RPRD1B-209ENST00000622494 CYB5RLQ6IPT4 315 aa8.75□□□□□ -1.01
RPRD1B-209ENST00000622494 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.75□□□□□ -1.01
RPRD1B-209ENST00000622494 SYNJ2O15056 1496 aa8.75□□□□□ -1.01
RPRD1B-209ENST00000622494 GTPBP6O43824 516 aaPredicted RBP8.74□□□□□ -1.01
RPRD1B-209ENST00000622494 GOLGA2Q08379 1002 aa8.74□□□□□ -1.01
RPRD1B-209ENST00000622494 MKRN3Q13064 507 aaKnown RBP8.74□□□□□ -1.01
RPRD1B-209ENST00000622494 FBXO22Q8NEZ5 403 aa8.74□□□□□ -1.01
RPRD1B-209ENST00000622494 CHMP7Q8WUX9 453 aaPredicted RBP8.74□□□□□ -1.01
RPRD1B-209ENST00000622494 IRX5P78411 483 aaPredicted RBP8.73□□□□□ -1.01
RPRD1B-209ENST00000622494 NLRP6P59044 892 aa8.72□□□□□ -1.01
RPRD1B-209ENST00000622494 SLC39A7Q92504 469 aa8.72□□□□□ -1.01
RPRD1B-209ENST00000622494 PHF8Q9UPP1 1060 aa8.72□□□□□ -1.01
RPRD1B-209ENST00000622494 GRIN2AQ12879 1464 aa8.71□□□□□ -1.01
RPRD1B-209ENST00000622494 C7P10643 843 aa8.71□□□□□ -1.02
RPRD1B-209ENST00000622494 PLCB2Q00722 1185 aa8.71□□□□□ -1.02
RPRD1B-209ENST00000622494 MS4A4AQ96JQ5 239 aa8.71□□□□□ -1.02
RPRD1B-209ENST00000622494 RYDENQ9NUL5 291 aaKnown RBP8.7□□□□□ -1.02
RPRD1B-209ENST00000622494 POTEFA5A3E0 1075 aa8.69□□□□□ -1.02
RPRD1B-209ENST00000622494 PDCD7Q8N8D1 485 aaKnown RBP8.69□□□□□ -1.02
RPRD1B-209ENST00000622494 SPRYD3Q8NCJ5 442 aa8.69□□□□□ -1.02
RPRD1B-209ENST00000622494 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.68□□□□□ -1.022e-7■■■■□ 19.7
RPRD1B-209ENST00000622494 METRNQ9UJH8 293 aa8.68□□□□□ -1.02
RPRD1B-209ENST00000622494 RUSC2Q8N2Y8 1516 aa8.68□□□□□ -1.02
RPRD1B-209ENST00000622494 PAXIP1Q6ZW49 1069 aaPredicted RBP8.67□□□□□ -1.02
RPRD1B-209ENST00000622494 OCEL1Q9H607 264 aa8.67□□□□□ -1.02
RPRD1B-209ENST00000622494 ERICH3Q5RHP9 1530 aa8.66□□□□□ -1.02
RPRD1B-209ENST00000622494 NUP160Q12769 1436 aa8.66□□□□□ -1.02
RPRD1B-209ENST00000622494 COLQQ9Y215 455 aaPredicted RBP8.66□□□□□ -1.02
RPRD1B-209ENST00000622494 SHROOM2Q13796 1616 aa8.65□□□□□ -1.02
RPRD1B-209ENST00000622494 FHAD1B1AJZ9 1412 aa8.65□□□□□ -1.02
RPRD1B-209ENST00000622494 CFAP44Q96MT7 982 aa8.64□□□□□ -1.03
RPRD1B-209ENST00000622494 PPP1R37O75864 691 aa8.63□□□□□ -1.03
RPRD1B-209ENST00000622494 PLCG2P16885 1265 aa8.63□□□□□ -1.03
RPRD1B-209ENST00000622494 IGF1RP08069 1367 aa8.62□□□□□ -1.03
RPRD1B-209ENST00000622494 DPY19L2Q6NUT2 758 aa8.62□□□□□ -1.03
RPRD1B-209ENST00000622494 SEC24BO95487 1268 aa8.61□□□□□ -1.03
RPRD1B-209ENST00000622494 PRG4Q92954 1404 aaPredicted RBP8.6□□□□□ -1.03
RPRD1B-209ENST00000622494 TMEM121BQ9BXQ6 578 aaPredicted RBP8.59□□□□□ -1.03
RPRD1B-209ENST00000622494 CUL7Q14999 1698 aa8.59□□□□□ -1.03
RPRD1B-209ENST00000622494 KIF27Q86VH2 1401 aa8.58□□□□□ -1.04
RPRD1B-209ENST00000622494 TTBK1Q5TCY1 1321 aaPredicted RBP8.57□□□□□ -1.04
RPRD1B-209ENST00000622494 L3MBTL3Q96JM7 780 aaPredicted RBP8.56□□□□□ -1.04
RPRD1B-209ENST00000622494 ADCY10Q96PN6 1610 aa8.55□□□□□ -1.04
RPRD1B-209ENST00000622494 POTEB2H3BUK9 544 aa8.55□□□□□ -1.04
RPRD1B-209ENST00000622494 MICALL2Q8IY33 904 aa8.55□□□□□ -1.04
RPRD1B-209ENST00000622494 BOLA1Q9Y3E2 137 aa8.55□□□□□ -1.04
RPRD1B-209ENST00000622494 KIF13AQ9H1H9 1805 aa8.54□□□□□ -1.04
RPRD1B-209ENST00000622494 CARMIL1Q5VZK9 1371 aa8.54□□□□□ -1.04
RPRD1B-209ENST00000622494 POTEJP0CG39 1038 aa8.54□□□□□ -1.04
RPRD1B-209ENST00000622494 JPH4Q96JJ6 628 aa8.54□□□□□ -1.04
RPRD1B-209ENST00000622494 TSHZ2Q9NRE2 1034 aa8.54□□□□□ -1.04
RPRD1B-209ENST00000622494 KIAA0586Q9BVV6 1533 aa8.51□□□□□ -1.05
RPRD1B-209ENST00000622494 HAP1P54257 671 aaPredicted RBP8.51□□□□□ -1.05
RPRD1B-209ENST00000622494 CADPS2Q86UW7 1296 aa8.51□□□□□ -1.05
RPRD1B-209ENST00000622494 IQGAP2Q13576 1575 aa8.51□□□□□ -1.05
RPRD1B-209ENST00000622494 DISP1Q96F81 1524 aa8.49□□□□□ -1.05
RPRD1B-209ENST00000622494 SLC24A1O60721 1099 aa8.48□□□□□ -1.05
RPRD1B-209ENST00000622494 FAM9AQ8IZU1 332 aaPredicted RBP8.48□□□□□ -1.05
RPRD1B-209ENST00000622494 CTTNBP2Q8WZ74 1663 aa8.48□□□□□ -1.05
RPRD1B-209ENST00000622494 TSPOAP1O95153 1857 aa8.47□□□□□ -1.05
RPRD1B-209ENST00000622494 RAPGEF2Q9Y4G8 1499 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms