RNA–Protein interactions for RNA: ENST00000622383.1

NKX2-3-202, Transcript of NK2 homeobox 3, humanhuman

TSL 5 BASIC

Gene NKX2-3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-202ENST00000622383 ABCA8O94911 1581 aa32.7■■■□□ 2.83
NKX2-3-202ENST00000622383 ADCY10Q96PN6 1610 aa32.69■■■□□ 2.82
NKX2-3-202ENST00000622383 TRIM52Q96A61 297 aa32.67■■■□□ 2.82
NKX2-3-202ENST00000622383 GPATCH8Q9UKJ3 1502 aaKnown RBP32.67■■■□□ 2.82
NKX2-3-202ENST00000622383 KIF14Q15058 1648 aa32.66■■■□□ 2.82
NKX2-3-202ENST00000622383 KDM5BQ9UGL1 1544 aa32.64■■■□□ 2.82
NKX2-3-202ENST00000622383 CFDP1Q9UEE9 299 aaPredicted RBP32.62■■■□□ 2.81
NKX2-3-202ENST00000622383 CAMSAP2Q08AD1 1489 aa32.62■■■□□ 2.81
NKX2-3-202ENST00000622383 MPHOSPH9Q99550 1183 aa32.61■■■□□ 2.81
NKX2-3-202ENST00000622383 ITSN2Q9NZM3 1697 aa32.6■■■□□ 2.81
NKX2-3-202ENST00000622383 ATP10BO94823 1461 aa32.6■■■□□ 2.81
NKX2-3-202ENST00000622383 PLEKHD1A6NEE1 506 aa32.54■■■□□ 2.8
NKX2-3-202ENST00000622383 HIRIP3Q9BW71 556 aaPredicted RBP32.52■■■□□ 2.8
NKX2-3-202ENST00000622383 DDX10Q13206 875 aaKnown RBP32.52■■■□□ 2.8
NKX2-3-202ENST00000622383 ABCC10Q5T3U5 1492 aa32.51■■■□□ 2.79
NKX2-3-202ENST00000622383 PTPRGP23470 1445 aa32.5■■■□□ 2.79
NKX2-3-202ENST00000622383 NCOA1Q15788 1441 aa32.48■■■□□ 2.79
NKX2-3-202ENST00000622383 CHD1O14646 1710 aa32.48■■■□□ 2.79
NKX2-3-202ENST00000622383 ZNF777Q9ULD5 760 aaPredicted RBP32.47■■■□□ 2.79
NKX2-3-202ENST00000622383 ADGRL2O95490 1459 aa32.45■■■□□ 2.79
NKX2-3-202ENST00000622383 FOXD1Q16676 465 aa32.45■■■□□ 2.78
NKX2-3-202ENST00000622383 ANKRD30BQ9BXX2 1392 aa32.43■■■□□ 2.78
NKX2-3-202ENST00000622383 CDC42BPAQ5VT25 1732 aa32.41■■■□□ 2.78
NKX2-3-202ENST00000622383 CROCC2H7BZ55 1655 aa32.41■■■□□ 2.78
NKX2-3-202ENST00000622383 ADGBQ8N7X0 1667 aa32.41■■■□□ 2.78
NKX2-3-202ENST00000622383 SHROOM2Q13796 1616 aa32.38■■■□□ 2.77
NKX2-3-202ENST00000622383 SLC4A1APQ9BWU0 796 aaKnown RBP32.36■■■□□ 2.77
NKX2-3-202ENST00000622383 PZPP20742 1482 aa32.35■■■□□ 2.77
NKX2-3-202ENST00000622383 RPRD2Q5VT52 1461 aaKnown RBP32.34■■■□□ 2.77
NKX2-3-202ENST00000622383 ANKRD30AQ9BXX3 1397 aa32.34■■■□□ 2.77
NKX2-3-202ENST00000622383 L3MBTL2Q969R5 705 aa32.34■■■□□ 2.77
NKX2-3-202ENST00000622383 KCNH8Q96L42 1107 aa32.32■■■□□ 2.77
NKX2-3-202ENST00000622383 SHANK2Q9UPX8 1470 aa32.3■■■□□ 2.76
NKX2-3-202ENST00000622383 TEX14Q8IWB6 1497 aa32.25■■■□□ 2.75
NKX2-3-202ENST00000622383 C9orf84Q5VXU9 1444 aa32.25■■■□□ 2.75
NKX2-3-202ENST00000622383 ANKRD50Q9ULJ7 1429 aa32.24■■■□□ 2.75
NKX2-3-202ENST00000622383 ERCC6L2Q5T890 1561 aa32.24■■■□□ 2.75
NKX2-3-202ENST00000622383 HSPA5P11021 654 aaKnown RBP32.21■■■□□ 2.75
NKX2-3-202ENST00000622383 MBD5Q9P267 1494 aa32.2■■■□□ 2.75
NKX2-3-202ENST00000622383 ARHGEF5Q12774 1597 aa32.19■■■□□ 2.74
NKX2-3-202ENST00000622383 HNRNPMP52272 730 aaKnown RBP eCLIP32.18■■■□□ 2.74
NKX2-3-202ENST00000622383 KIAA1107Q9UPP5 1409 aa32.17■■■□□ 2.74
NKX2-3-202ENST00000622383 TSPY4P0CV99 314 aa32.16■■■□□ 2.74
NKX2-3-202ENST00000622383 TSPY10P0CW01 314 aa32.16■■■□□ 2.74
NKX2-3-202ENST00000622383 PREX2Q70Z35 1606 aa32.15■■■□□ 2.74
NKX2-3-202ENST00000622383 ABCC2Q92887 1545 aa32.15■■■□□ 2.74
NKX2-3-202ENST00000622383 ANP32CO43423 234 aa32.15■■■□□ 2.74
NKX2-3-202ENST00000622383 SAMD9LQ8IVG5 1584 aa32.15■■■□□ 2.74
NKX2-3-202ENST00000622383 EIF4G2P78344 907 aaKnown RBP eCLIP32.14■■■□□ 2.74
NKX2-3-202ENST00000622383 NBPF8Q3BBV2 869 aa32.14■■■□□ 2.74
NKX2-3-202ENST00000622383 CDC42BPBQ9Y5S2 1711 aa32.14■■■□□ 2.74
NKX2-3-202ENST00000622383 CCER2I3L3R5 266 aa32.13■■■□□ 2.73
NKX2-3-202ENST00000622383 PKD2Q13563 968 aa32.11■■■□□ 2.73
NKX2-3-202ENST00000622383 CLASP1Q7Z460 1538 aa32.11■■■□□ 2.73
NKX2-3-202ENST00000622383 WASHC2AQ641Q2 1341 aa32.1■■■□□ 2.73
NKX2-3-202ENST00000622383 KIF15Q9NS87 1388 aa32.09■■■□□ 2.73
NKX2-3-202ENST00000622383 CCDC141Q6ZP82 1450 aa32.08■■■□□ 2.73
NKX2-3-202ENST00000622383 TTC37Q6PGP7 1564 aa32.07■■■□□ 2.72
NKX2-3-202ENST00000622383 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.07■■■□□ 2.72
NKX2-3-202ENST00000622383 NUP155O75694 1391 aa32.06■■■□□ 2.72
NKX2-3-202ENST00000622383 KDM5DQ9BY66 1539 aa32.06■■■□□ 2.72
NKX2-3-202ENST00000622383 RSPH4AQ5TD94 716 aa32.04■■■□□ 2.72
NKX2-3-202ENST00000622383 ARHGAP5Q13017 1502 aa31.99■■■□□ 2.71
NKX2-3-202ENST00000622383 SYCP2Q9BX26 1530 aa31.98■■■□□ 2.71
NKX2-3-202ENST00000622383 SPATA31E1Q6ZUB1 1445 aa31.98■■■□□ 2.71
NKX2-3-202ENST00000622383 UHRF1BP1LA0JNW5 1464 aa31.96■■■□□ 2.71
NKX2-3-202ENST00000622383 C11orf95C9JLR9 678 aaPredicted RBP31.96■■■□□ 2.71
NKX2-3-202ENST00000622383 MAST1Q9Y2H9 1570 aa31.93■■■□□ 2.7
NKX2-3-202ENST00000622383 CCDC7Q96M83 1385 aa31.91■■■□□ 2.7
NKX2-3-202ENST00000622383 ZCCHC11Q5TAX3 1644 aaKnown RBP31.91■■■□□ 2.7
NKX2-3-202ENST00000622383 MYO5CQ9NQX4 1742 aa31.9■■■□□ 2.7
NKX2-3-202ENST00000622383 PLEKHH2Q8IVE3 1493 aa31.88■■■□□ 2.69
NKX2-3-202ENST00000622383 CNTLNQ9NXG0 1405 aa31.88■■■□□ 2.69
NKX2-3-202ENST00000622383 PLCH2O75038 1416 aa31.85■■■□□ 2.69
NKX2-3-202ENST00000622383 ARHGEF12Q9NZN5 1544 aa31.84■■■□□ 2.69
NKX2-3-202ENST00000622383 FAM135AQ9P2D6 1515 aa31.83■■■□□ 2.69
NKX2-3-202ENST00000622383 UHRF1BP1Q6BDS2 1440 aa31.82■■■□□ 2.68
NKX2-3-202ENST00000622383 PLXNC1O60486 1568 aa31.8■■■□□ 2.68
NKX2-3-202ENST00000622383 SUPT16HQ9Y5B9 1047 aaKnown RBP31.79■■■□□ 2.68
NKX2-3-202ENST00000622383 KIF7Q2M1P5 1343 aa31.79■■■□□ 2.68
NKX2-3-202ENST00000622383 PELP1Q8IZL8 1130 aaKnown RBP31.79■■■□□ 2.68
NKX2-3-202ENST00000622383 UNC13BO14795 1591 aa31.76■■■□□ 2.68
NKX2-3-202ENST00000622383 ZNF326Q5BKZ1 582 aaKnown RBP31.76■■■□□ 2.68
NKX2-3-202ENST00000622383 EFCAB2Q5VUJ9 269 aa31.75■■■□□ 2.67
NKX2-3-202ENST00000622383 USP47Q96K76 1375 aa31.74■■■□□ 2.67
NKX2-3-202ENST00000622383 POLR1AO95602 1720 aaPredicted RBP31.73■■■□□ 2.67
NKX2-3-202ENST00000622383 RALGAPBQ86X10 1494 aa31.72■■■□□ 2.67
NKX2-3-202ENST00000622383 ABCC1P33527 1531 aa31.7■■■□□ 2.67
NKX2-3-202ENST00000622383 DUOX2Q9NRD8 1548 aa31.69■■■□□ 2.66
NKX2-3-202ENST00000622383 KDM5CP41229 1560 aa31.69■■■□□ 2.66
NKX2-3-202ENST00000622383 TRAPPC8Q9Y2L5 1435 aa31.66■■■□□ 2.66
NKX2-3-202ENST00000622383 PRKRIP1Q9H875 184 aaPredicted RBP31.65■■■□□ 2.66
NKX2-3-202ENST00000622383 PLA2R1Q13018 1463 aa31.65■■■□□ 2.66
NKX2-3-202ENST00000622383 IQGAP3Q86VI3 1631 aa31.64■■■□□ 2.66
NKX2-3-202ENST00000622383 ERBINQ96RT1 1412 aa31.64■■■□□ 2.66
NKX2-3-202ENST00000622383 BCORL1Q5H9F3 1711 aa31.64■■■□□ 2.66
NKX2-3-202ENST00000622383 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.64■■■□□ 2.66
NKX2-3-202ENST00000622383 MAGI2Q86UL8 1455 aa31.63■■■□□ 2.65
NKX2-3-202ENST00000622383 ARAP3Q8WWN8 1544 aa31.63■■■□□ 2.65
NKX2-3-202ENST00000622383 OSCARQ8IYS5 282 aa31.63■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms