RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 HECW1Q76N89 1606 aa25.26■■□□□ 1.63
SNX12-206ENST00000622259 MAGI2Q86UL8 1455 aa25.24■■□□□ 1.63
SNX12-206ENST00000622259 SAMD9Q5K651 1589 aa25.23■■□□□ 1.63
SNX12-206ENST00000622259 CFAP74Q9C0B2 1584 aa25.23■■□□□ 1.63
SNX12-206ENST00000622259 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.23■■□□□ 1.63
SNX12-206ENST00000622259 LTBP4Q8N2S1 1624 aa25.22■■□□□ 1.63
SNX12-206ENST00000622259 PTPRTO14522 1441 aa25.19■■□□□ 1.62
SNX12-206ENST00000622259 UHRF1BP1Q6BDS2 1440 aa25.18■■□□□ 1.62
SNX12-206ENST00000622259 PLEKHD1A6NEE1 506 aa25.17■■□□□ 1.62
SNX12-206ENST00000622259 ATP10AO60312 1499 aa25.15■■□□□ 1.62
SNX12-206ENST00000622259 SCAPERQ9BY12 1400 aa25.14■■□□□ 1.62
SNX12-206ENST00000622259 C9orf84Q5VXU9 1444 aa25.13■■□□□ 1.61
SNX12-206ENST00000622259 SETD1BQ9UPS6 1966 aaKnown RBP25.12■■□□□ 1.61
SNX12-206ENST00000622259 IQSEC2Q5JU85 1478 aa25.1■■□□□ 1.61
SNX12-206ENST00000622259 PLCH2O75038 1416 aa25.03■■□□□ 1.6
SNX12-206ENST00000622259 RANGAP1P46060 587 aaPredicted RBP25.02■■□□□ 1.6
SNX12-206ENST00000622259 C3P01024 1663 aa25.01■■□□□ 1.59
SNX12-206ENST00000622259 NCOA1Q15788 1441 aa25■■□□□ 1.59
SNX12-206ENST00000622259 CDK13Q14004 1512 aaKnown RBP24.96■■□□□ 1.59
SNX12-206ENST00000622259 UBAP1LF5GYI3 381 aa24.96■■□□□ 1.59
SNX12-206ENST00000622259 ZNF335Q9H4Z2 1342 aaPredicted RBP24.93■■□□□ 1.58
SNX12-206ENST00000622259 AFAP1Q8N556 730 aa24.93■■□□□ 1.58
SNX12-206ENST00000622259 TRAPPC8Q9Y2L5 1435 aa24.93■■□□□ 1.58
SNX12-206ENST00000622259 DIP2CQ9Y2E4 1556 aa24.92■■□□□ 1.58
SNX12-206ENST00000622259 KDM5CP41229 1560 aa24.9■■□□□ 1.58
SNX12-206ENST00000622259 EFCAB2Q5VUJ9 269 aa24.9■■□□□ 1.58
SNX12-206ENST00000622259 CAMSAP1Q5T5Y3 1602 aa24.89■■□□□ 1.57
SNX12-206ENST00000622259 ZNF518AQ6AHZ1 1483 aa24.89■■□□□ 1.57
SNX12-206ENST00000622259 NCKAP5LQ9HCH0 1330 aa24.87■■□□□ 1.57
SNX12-206ENST00000622259 MED1Q15648 1581 aaPredicted RBP24.87■■□□□ 1.57
SNX12-206ENST00000622259 REREQ9P2R6 1566 aa24.86■■□□□ 1.57
SNX12-206ENST00000622259 MYO5CQ9NQX4 1742 aa24.86■■□□□ 1.57
SNX12-206ENST00000622259 ABCA6Q8N139 1617 aa24.85■■□□□ 1.57
SNX12-206ENST00000622259 CSRNP3Q8WYN3 585 aa24.84■■□□□ 1.57
SNX12-206ENST00000622259 MYT1LQ9UL68 1186 aa24.84■■□□□ 1.57
SNX12-206ENST00000622259 HSPA1LP34931 641 aa24.8■■□□□ 1.56
SNX12-206ENST00000622259 ESF1Q9H501 851 aaKnown RBP24.8■■□□□ 1.56
SNX12-206ENST00000622259 AGLP35573 1532 aa24.8■■□□□ 1.56
SNX12-206ENST00000622259 KIF14Q15058 1648 aa24.79■■□□□ 1.56
SNX12-206ENST00000622259 MLH3Q9UHC1 1453 aa24.77■■□□□ 1.56
SNX12-206ENST00000622259 ARHGAP5Q13017 1502 aa24.76■■□□□ 1.55
SNX12-206ENST00000622259 CNTLNQ9NXG0 1405 aa24.73■■□□□ 1.55
SNX12-206ENST00000622259 NPATQ14207 1427 aa24.72■■□□□ 1.55
SNX12-206ENST00000622259 SCAF1Q9H7N4 1312 aaKnown RBP24.71■■□□□ 1.55
SNX12-206ENST00000622259 PIP4K2BP78356 416 aa24.71■■□□□ 1.55
SNX12-206ENST00000622259 TCOF1Q13428 1488 aaKnown RBP24.69■■□□□ 1.54
SNX12-206ENST00000622259 ZMYM3Q14202 1370 aa24.68■■□□□ 1.54
SNX12-206ENST00000622259 ATP1B4Q9UN42 357 aaPredicted RBP24.68■■□□□ 1.54
SNX12-206ENST00000622259 PLA2R1Q13018 1463 aa24.67■■□□□ 1.54
SNX12-206ENST00000622259 PKD2Q13563 968 aa24.67■■□□□ 1.54
SNX12-206ENST00000622259 KIDINS220Q9ULH0 1771 aa24.66■■□□□ 1.54
SNX12-206ENST00000622259 CDC42BPBQ9Y5S2 1711 aa24.66■■□□□ 1.54
SNX12-206ENST00000622259 MROH2AA6NES4 1674 aa24.66■■□□□ 1.54
SNX12-206ENST00000622259 ZNF142P52746 1687 aaPredicted RBP24.64■■□□□ 1.53
SNX12-206ENST00000622259 MYO3AQ8NEV4 1616 aa24.64■■□□□ 1.53
SNX12-206ENST00000622259 TROQ12816 1431 aaPredicted RBP24.63■■□□□ 1.53
SNX12-206ENST00000622259 PPP6R1Q9UPN7 881 aa24.63■■□□□ 1.53
SNX12-206ENST00000622259 ABCC1P33527 1531 aa24.62■■□□□ 1.53
SNX12-206ENST00000622259 PHF23Q9BUL5 403 aaPredicted RBP24.62■■□□□ 1.53
SNX12-206ENST00000622259 SUPT6HQ7KZ85 1726 aaKnown RBP24.61■■□□□ 1.53
SNX12-206ENST00000622259 ITSN2Q9NZM3 1697 aa24.6■■□□□ 1.53
SNX12-206ENST00000622259 CEP170BQ9Y4F5 1589 aaPredicted RBP24.6■■□□□ 1.53
SNX12-206ENST00000622259 CDK11AQ9UQ88 783 aaPredicted RBP24.6■■□□□ 1.53
SNX12-206ENST00000622259 TOM1O60784 492 aa24.58■■□□□ 1.53
SNX12-206ENST00000622259 PTPRKQ15262 1439 aa24.57■■□□□ 1.52
SNX12-206ENST00000622259 CLTCQ00610 1675 aaKnown RBP24.56■■□□□ 1.52
SNX12-206ENST00000622259 PREX2Q70Z35 1606 aa24.53■■□□□ 1.52
SNX12-206ENST00000622259 ALKQ9UM73 1620 aa24.53■■□□□ 1.52
SNX12-206ENST00000622259 CLIP1P30622 1438 aa24.52■■□□□ 1.52
SNX12-206ENST00000622259 LRRIQ1Q96JM4 1722 aa24.52■■□□□ 1.52
SNX12-206ENST00000622259 FMN1Q68DA7 1419 aa24.52■■□□□ 1.52
SNX12-206ENST00000622259 CPS1P31327 1500 aa24.51■■□□□ 1.51
SNX12-206ENST00000622259 SAMD9LQ8IVG5 1584 aa24.5■■□□□ 1.51
SNX12-206ENST00000622259 SHANK2Q9UPX8 1470 aa24.49■■□□□ 1.51
SNX12-206ENST00000622259 DNMT1P26358 1616 aaKnown RBP24.47■■□□□ 1.51
SNX12-206ENST00000622259 NEURL4Q96JN8 1562 aa24.47■■□□□ 1.51
SNX12-206ENST00000622259 RGS17Q9UGC6 210 aaPredicted RBP24.47■■□□□ 1.51
SNX12-206ENST00000622259 ARHGAP35Q9NRY4 1499 aa24.46■■□□□ 1.51
SNX12-206ENST00000622259 EEA1Q15075 1411 aa24.46■■□□□ 1.51
SNX12-206ENST00000622259 SENP3Q9H4L4 574 aaPredicted RBP24.46■■□□□ 1.51
SNX12-206ENST00000622259 A2ML1A8K2U0 1454 aa24.44■■□□□ 1.5
SNX12-206ENST00000622259 PLXNC1O60486 1568 aa24.42■■□□□ 1.5
SNX12-206ENST00000622259 CDC42BPAQ5VT25 1732 aa24.41■■□□□ 1.5
SNX12-206ENST00000622259 GGT6Q6P531 493 aa24.41■■□□□ 1.5
SNX12-206ENST00000622259 VWDEQ8N2E2 1590 aa24.41■■□□□ 1.5
SNX12-206ENST00000622259 POLR1AO95602 1720 aaPredicted RBP24.41■■□□□ 1.5
SNX12-206ENST00000622259 SPAG9O60271 1321 aaKnown RBP24.4■■□□□ 1.5
SNX12-206ENST00000622259 SYCP2Q9BX26 1530 aa24.39■■□□□ 1.49
SNX12-206ENST00000622259 EHMT2Q96KQ7 1210 aa24.38■■□□□ 1.49
SNX12-206ENST00000622259 ZNF777Q9ULD5 760 aaPredicted RBP24.38■■□□□ 1.49
SNX12-206ENST00000622259 A2MP01023 1474 aa24.38■■□□□ 1.49
SNX12-206ENST00000622259 HNRNPMP52272 730 aaKnown RBP eCLIP24.37■■□□□ 1.49
SNX12-206ENST00000622259 ATP7AQ04656 1500 aa24.36■■□□□ 1.49
SNX12-206ENST00000622259 INO80Q9ULG1 1556 aaPredicted RBP24.33■■□□□ 1.48
SNX12-206ENST00000622259 FBXO31Q5XUX0 539 aaPredicted RBP24.31■■□□□ 1.48
SNX12-206ENST00000622259 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.29■■□□□ 1.48
SNX12-206ENST00000622259 STRCP1A6NGW2 1772 aa24.29■■□□□ 1.48
SNX12-206ENST00000622259 UBTFP17480 764 aaKnown RBP24.28■■□□□ 1.48
SNX12-206ENST00000622259 TNRQ92752 1358 aa24.27■■□□□ 1.48
SNX12-206ENST00000622259 LRRC7Q96NW7 1537 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms