RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 ABCA8O94911 1581 aa13.43□□□□□ -0.26
PDPN-212ENST00000621990 CROCC2H7BZ55 1655 aa13.43□□□□□ -0.26
PDPN-212ENST00000621990 ADGBQ8N7X0 1667 aa13.42□□□□□ -0.26
PDPN-212ENST00000621990 PRG4Q92954 1404 aaPredicted RBP13.42□□□□□ -0.26
PDPN-212ENST00000621990 DDX10Q13206 875 aaKnown RBP13.41□□□□□ -0.26
PDPN-212ENST00000621990 KIF14Q15058 1648 aa13.41□□□□□ -0.26
PDPN-212ENST00000621990 GPATCH8Q9UKJ3 1502 aaKnown RBP13.41□□□□□ -0.26
PDPN-212ENST00000621990 CAMSAP2Q08AD1 1489 aa13.41□□□□□ -0.26
PDPN-212ENST00000621990 ARID3CA6NKF2 412 aa13.41□□□□□ -0.26
PDPN-212ENST00000621990 MPHOSPH9Q99550 1183 aa13.4□□□□□ -0.26
PDPN-212ENST00000621990 ADGRL2O95490 1459 aa13.4□□□□□ -0.26
PDPN-212ENST00000621990 JPH4Q96JJ6 628 aa13.39□□□□□ -0.27
PDPN-212ENST00000621990 ZNF644Q9H582 1327 aaPredicted RBP13.38□□□□□ -0.27
PDPN-212ENST00000621990 ANKRD30BQ9BXX2 1392 aa13.38□□□□□ -0.27
PDPN-212ENST00000621990 RPRD2Q5VT52 1461 aaKnown RBP13.37□□□□□ -0.27
PDPN-212ENST00000621990 CCER2I3L3R5 266 aa13.37□□□□□ -0.27
PDPN-212ENST00000621990 CDC42BPAQ5VT25 1732 aa13.36□□□□□ -0.27
PDPN-212ENST00000621990 TRIM52Q96A61 297 aa13.36□□□□□ -0.27
PDPN-212ENST00000621990 NCOA1Q15788 1441 aa13.36□□□□□ -0.27
PDPN-212ENST00000621990 KCNH8Q96L42 1107 aa13.36□□□□□ -0.27
PDPN-212ENST00000621990 ABCC10Q5T3U5 1492 aa13.35□□□□□ -0.27
PDPN-212ENST00000621990 TEX14Q8IWB6 1497 aa13.35□□□□□ -0.27
PDPN-212ENST00000621990 HIRIP3Q9BW71 556 aaPredicted RBP13.34□□□□□ -0.27
PDPN-212ENST00000621990 PZPP20742 1482 aa13.34□□□□□ -0.27
PDPN-212ENST00000621990 ATP10BO94823 1461 aa13.33□□□□□ -0.27
PDPN-212ENST00000621990 SHANK2Q9UPX8 1470 aa13.33□□□□□ -0.27
PDPN-212ENST00000621990 CFDP1Q9UEE9 299 aaPredicted RBP13.33□□□□□ -0.28
PDPN-212ENST00000621990 FBLN2P98095 1184 aa13.32□□□□□ -0.28
PDPN-212ENST00000621990 ANP32CO43423 234 aa13.3□□□□□ -0.28
PDPN-212ENST00000621990 L3MBTL2Q969R5 705 aa13.3□□□□□ -0.28
PDPN-212ENST00000621990 SHROOM2Q13796 1616 aa13.29□□□□□ -0.28
PDPN-212ENST00000621990 ANKRD30AQ9BXX3 1397 aa13.28□□□□□ -0.28
PDPN-212ENST00000621990 ARHGEF5Q12774 1597 aa13.28□□□□□ -0.28
PDPN-212ENST00000621990 POLR1AO95602 1720 aaPredicted RBP13.28□□□□□ -0.28
PDPN-212ENST00000621990 HSPA5P11021 654 aaKnown RBP13.27□□□□□ -0.28
PDPN-212ENST00000621990 SUPT16HQ9Y5B9 1047 aaKnown RBP13.27□□□□□ -0.28
PDPN-212ENST00000621990 MBD5Q9P267 1494 aa13.27□□□□□ -0.28
PDPN-212ENST00000621990 CHD1O14646 1710 aa13.27□□□□□ -0.28
PDPN-212ENST00000621990 PLEKHD1A6NEE1 506 aa13.27□□□□□ -0.29
PDPN-212ENST00000621990 FOXD1Q16676 465 aa13.27□□□□□ -0.29
PDPN-212ENST00000621990 KDM5DQ9BY66 1539 aa13.27□□□□□ -0.29
PDPN-212ENST00000621990 SLC4A1APQ9BWU0 796 aaKnown RBP13.26□□□□□ -0.29
PDPN-212ENST00000621990 WASHC2AQ641Q2 1341 aa13.26□□□□□ -0.29
PDPN-212ENST00000621990 KIAA1107Q9UPP5 1409 aa13.26□□□□□ -0.29
PDPN-212ENST00000621990 EIF4G2P78344 907 aaKnown RBP eCLIP13.26□□□□□ -0.29
PDPN-212ENST00000621990 SPATA31E1Q6ZUB1 1445 aa13.25□□□□□ -0.29
PDPN-212ENST00000621990 C9orf84Q5VXU9 1444 aa13.25□□□□□ -0.29
PDPN-212ENST00000621990 ANKRD50Q9ULJ7 1429 aa13.25□□□□□ -0.29
PDPN-212ENST00000621990 PREX2Q70Z35 1606 aa13.25□□□□□ -0.29
PDPN-212ENST00000621990 PTPRGP23470 1445 aa13.24□□□□□ -0.29
PDPN-212ENST00000621990 CDC42BPBQ9Y5S2 1711 aa13.23□□□□□ -0.29
PDPN-212ENST00000621990 CNTLNQ9NXG0 1405 aa13.22□□□□□ -0.29
PDPN-212ENST00000621990 NBPF8Q3BBV2 869 aa13.22□□□□□ -0.29
PDPN-212ENST00000621990 SAMD9LQ8IVG5 1584 aa13.21□□□□□ -0.29
PDPN-212ENST00000621990 ZNF777Q9ULD5 760 aaPredicted RBP13.21□□□□□ -0.29
PDPN-212ENST00000621990 CCDC7Q96M83 1385 aa13.2□□□□□ -0.3
PDPN-212ENST00000621990 MAST1Q9Y2H9 1570 aa13.18□□□□□ -0.3
PDPN-212ENST00000621990 CCDC141Q6ZP82 1450 aa13.18□□□□□ -0.3
PDPN-212ENST00000621990 ARHGEF12Q9NZN5 1544 aa13.18□□□□□ -0.3
PDPN-212ENST00000621990 UHRF1BP1Q6BDS2 1440 aa13.17□□□□□ -0.3
PDPN-212ENST00000621990 ABCC2Q92887 1545 aa13.16□□□□□ -0.3
PDPN-212ENST00000621990 C11orf95C9JLR9 678 aaPredicted RBP13.16□□□□□ -0.3
PDPN-212ENST00000621990 TTC37Q6PGP7 1564 aa13.16□□□□□ -0.3
PDPN-212ENST00000621990 PKD2Q13563 968 aa13.16□□□□□ -0.3
PDPN-212ENST00000621990 KIF15Q9NS87 1388 aa13.15□□□□□ -0.3
PDPN-212ENST00000621990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.15□□□□□ -0.3
PDPN-212ENST00000621990 RSPH4AQ5TD94 716 aa13.15□□□□□ -0.3
PDPN-212ENST00000621990 KDM5CP41229 1560 aa13.14□□□□□ -0.31
PDPN-212ENST00000621990 TSPY4P0CV99 314 aa13.14□□□□□ -0.31
PDPN-212ENST00000621990 TSPY10P0CW01 314 aa13.14□□□□□ -0.31
PDPN-212ENST00000621990 NUP155O75694 1391 aa13.14□□□□□ -0.31
PDPN-212ENST00000621990 MYO5CQ9NQX4 1742 aa13.13□□□□□ -0.31
PDPN-212ENST00000621990 RALGAPBQ86X10 1494 aa13.13□□□□□ -0.31
PDPN-212ENST00000621990 UNC13BO14795 1591 aa13.13□□□□□ -0.31
PDPN-212ENST00000621990 PLXNC1O60486 1568 aa13.13□□□□□ -0.31
PDPN-212ENST00000621990 ERCC6L2Q5T890 1561 aa13.13□□□□□ -0.31
PDPN-212ENST00000621990 CLASP1Q7Z460 1538 aa13.12□□□□□ -0.31
PDPN-212ENST00000621990 KIF7Q2M1P5 1343 aa13.12□□□□□ -0.31
PDPN-212ENST00000621990 SYCP2Q9BX26 1530 aa13.12□□□□□ -0.31
PDPN-212ENST00000621990 BCORL1Q5H9F3 1711 aa13.11□□□□□ -0.31
PDPN-212ENST00000621990 FAM135AQ9P2D6 1515 aa13.11□□□□□ -0.31
PDPN-212ENST00000621990 HNRNPMP52272 730 aaKnown RBP eCLIP13.11□□□□□ -0.31
PDPN-212ENST00000621990 PLEKHH2Q8IVE3 1493 aa13.1□□□□□ -0.31
PDPN-212ENST00000621990 UHRF1BP1LA0JNW5 1464 aa13.1□□□□□ -0.31
PDPN-212ENST00000621990 ARHGAP5Q13017 1502 aa13.1□□□□□ -0.31
PDPN-212ENST00000621990 ARID4BQ4LE39 1312 aaPredicted RBP13.09□□□□□ -0.31
PDPN-212ENST00000621990 PRKRIP1Q9H875 184 aaPredicted RBP13.09□□□□□ -0.31
PDPN-212ENST00000621990 USP47Q96K76 1375 aa13.09□□□□□ -0.31
PDPN-212ENST00000621990 ZCCHC11Q5TAX3 1644 aaKnown RBP13.08□□□□□ -0.32
PDPN-212ENST00000621990 IQGAP3Q86VI3 1631 aa13.07□□□□□ -0.32
PDPN-212ENST00000621990 MAGI2Q86UL8 1455 aa13.06□□□□□ -0.32
PDPN-212ENST00000621990 DHX29Q7Z478 1369 aaKnown RBP13.05□□□□□ -0.32
PDPN-212ENST00000621990 FKBP8Q14318 412 aa13.04□□□□□ -0.32
PDPN-212ENST00000621990 DUOX2Q9NRD8 1548 aa13.04□□□□□ -0.32
PDPN-212ENST00000621990 PLCH2O75038 1416 aa13.04□□□□□ -0.32
PDPN-212ENST00000621990 ERBINQ96RT1 1412 aa13.03□□□□□ -0.32
PDPN-212ENST00000621990 ATP10AO60312 1499 aa13.03□□□□□ -0.32
PDPN-212ENST00000621990 ABCC1P33527 1531 aa13.03□□□□□ -0.32
PDPN-212ENST00000621990 ARAP3Q8WWN8 1544 aa13.03□□□□□ -0.32
PDPN-212ENST00000621990 HNRNPUQ00839 825 aaKnown RBP eCLIP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms