RNA–Protein interactions for RNA: ENST00000621936.1

PCCA-210, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

Gene PCCA, Length 1,850 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-210ENST00000621936 FBLN2P98095 1184 aa16.56■□□□□ 0.24
PCCA-210ENST00000621936 DDX10Q13206 875 aaKnown RBP16.56■□□□□ 0.24
PCCA-210ENST00000621936 RRP7BPQ9NSQ0 103 aa16.55■□□□□ 0.24
PCCA-210ENST00000621936 SENP3Q9H4L4 574 aaPredicted RBP16.54■□□□□ 0.24
PCCA-210ENST00000621936 MPHOSPH9Q99550 1183 aa16.54■□□□□ 0.24
PCCA-210ENST00000621936 KDM6BO15054 1643 aa16.53■□□□□ 0.24
PCCA-210ENST00000621936 ADGRL2O95490 1459 aa16.52■□□□□ 0.24
PCCA-210ENST00000621936 ADGBQ8N7X0 1667 aa16.51■□□□□ 0.23
PCCA-210ENST00000621936 ANP32CO43423 234 aa16.51■□□□□ 0.23
PCCA-210ENST00000621936 PLB1Q6P1J6 1458 aa16.51■□□□□ 0.23
PCCA-210ENST00000621936 CHIC2Q9UKJ5 165 aa16.5■□□□□ 0.23
PCCA-210ENST00000621936 ABCA8O94911 1581 aa16.5■□□□□ 0.23
PCCA-210ENST00000621936 ARID3CA6NKF2 412 aa16.5■□□□□ 0.23
PCCA-210ENST00000621936 TRIM52Q96A61 297 aa16.49■□□□□ 0.23
PCCA-210ENST00000621936 ANKRD30BQ9BXX2 1392 aa16.49■□□□□ 0.23
PCCA-210ENST00000621936 RPRD2Q5VT52 1461 aaKnown RBP16.49■□□□□ 0.23
PCCA-210ENST00000621936 GPATCH8Q9UKJ3 1502 aaKnown RBP16.49■□□□□ 0.23
PCCA-210ENST00000621936 CAMSAP2Q08AD1 1489 aa16.48■□□□□ 0.23
PCCA-210ENST00000621936 PRG4Q92954 1404 aaPredicted RBP16.47■□□□□ 0.23
PCCA-210ENST00000621936 CROCC2H7BZ55 1655 aa16.47■□□□□ 0.23
PCCA-210ENST00000621936 NCOA1Q15788 1441 aa16.45■□□□□ 0.22
PCCA-210ENST00000621936 PLEKHD1A6NEE1 506 aa16.44■□□□□ 0.22
PCCA-210ENST00000621936 SHANK2Q9UPX8 1470 aa16.44■□□□□ 0.22
PCCA-210ENST00000621936 CFDP1Q9UEE9 299 aaPredicted RBP16.44■□□□□ 0.22
PCCA-210ENST00000621936 SUPT16HQ9Y5B9 1047 aaKnown RBP16.43■□□□□ 0.22
PCCA-210ENST00000621936 KIF14Q15058 1648 aa16.42■□□□□ 0.22
PCCA-210ENST00000621936 EIF4G2P78344 907 aaKnown RBP eCLIP16.42■□□□□ 0.22
PCCA-210ENST00000621936 ATP10BO94823 1461 aa16.41■□□□□ 0.22
PCCA-210ENST00000621936 ABCC10Q5T3U5 1492 aa16.41■□□□□ 0.22
PCCA-210ENST00000621936 TEX14Q8IWB6 1497 aa16.41■□□□□ 0.22
PCCA-210ENST00000621936 PTPRGP23470 1445 aa16.4■□□□□ 0.22
PCCA-210ENST00000621936 ANKRD30AQ9BXX3 1397 aa16.4■□□□□ 0.22
PCCA-210ENST00000621936 PZPP20742 1482 aa16.39■□□□□ 0.21
PCCA-210ENST00000621936 HSPA5P11021 654 aaKnown RBP16.39■□□□□ 0.21
PCCA-210ENST00000621936 L3MBTL2Q969R5 705 aa16.39■□□□□ 0.21
PCCA-210ENST00000621936 KCNH8Q96L42 1107 aa16.39■□□□□ 0.21
PCCA-210ENST00000621936 CHD1O14646 1710 aa16.39■□□□□ 0.21
PCCA-210ENST00000621936 ZNF644Q9H582 1327 aaPredicted RBP16.38■□□□□ 0.21
PCCA-210ENST00000621936 CDC42BPAQ5VT25 1732 aa16.37■□□□□ 0.21
PCCA-210ENST00000621936 SHROOM2Q13796 1616 aa16.37■□□□□ 0.21
PCCA-210ENST00000621936 ARHGEF5Q12774 1597 aa16.37■□□□□ 0.21
PCCA-210ENST00000621936 HIRIP3Q9BW71 556 aaPredicted RBP16.36■□□□□ 0.21
PCCA-210ENST00000621936 KIAA1107Q9UPP5 1409 aa16.36■□□□□ 0.21
PCCA-210ENST00000621936 KDM5DQ9BY66 1539 aa16.36■□□□□ 0.21
PCCA-210ENST00000621936 POLR1AO95602 1720 aaPredicted RBP16.35■□□□□ 0.21
PCCA-210ENST00000621936 SLC4A1APQ9BWU0 796 aaKnown RBP16.35■□□□□ 0.21
PCCA-210ENST00000621936 CNTLNQ9NXG0 1405 aa16.34■□□□□ 0.21
PCCA-210ENST00000621936 WASHC2AQ641Q2 1341 aa16.34■□□□□ 0.21
PCCA-210ENST00000621936 SPATA31E1Q6ZUB1 1445 aa16.33■□□□□ 0.2
PCCA-210ENST00000621936 MBD5Q9P267 1494 aa16.32■□□□□ 0.2
PCCA-210ENST00000621936 RSPH4AQ5TD94 716 aa16.32■□□□□ 0.2
PCCA-210ENST00000621936 ANKRD50Q9ULJ7 1429 aa16.31■□□□□ 0.2
PCCA-210ENST00000621936 CCDC7Q96M83 1385 aa16.31■□□□□ 0.2
PCCA-210ENST00000621936 ZNF777Q9ULD5 760 aaPredicted RBP16.3■□□□□ 0.2
PCCA-210ENST00000621936 C9orf84Q5VXU9 1444 aa16.29■□□□□ 0.2
PCCA-210ENST00000621936 ARID4BQ4LE39 1312 aaPredicted RBP16.28■□□□□ 0.2
PCCA-210ENST00000621936 UHRF1BP1Q6BDS2 1440 aa16.28■□□□□ 0.2
PCCA-210ENST00000621936 ARHGEF12Q9NZN5 1544 aa16.27■□□□□ 0.2
PCCA-210ENST00000621936 NBPF8Q3BBV2 869 aa16.27■□□□□ 0.19
PCCA-210ENST00000621936 TSPY4P0CV99 314 aa16.26■□□□□ 0.19
PCCA-210ENST00000621936 TSPY10P0CW01 314 aa16.26■□□□□ 0.19
PCCA-210ENST00000621936 PREX2Q70Z35 1606 aa16.26■□□□□ 0.19
PCCA-210ENST00000621936 FOXD1Q16676 465 aa16.25■□□□□ 0.19
PCCA-210ENST00000621936 MAST1Q9Y2H9 1570 aa16.25■□□□□ 0.19
PCCA-210ENST00000621936 ABCC2Q92887 1545 aa16.24■□□□□ 0.19
PCCA-210ENST00000621936 CCDC141Q6ZP82 1450 aa16.23■□□□□ 0.19
PCCA-210ENST00000621936 MYT1Q01538 1121 aa16.22■□□□□ 0.19
PCCA-210ENST00000621936 NEFLP07196 543 aa16.22■□□□□ 0.19
PCCA-210ENST00000621936 PKD2Q13563 968 aa16.21■□□□□ 0.19
PCCA-210ENST00000621936 CLASP1Q7Z460 1538 aa16.21■□□□□ 0.19
PCCA-210ENST00000621936 PLEKHH2Q8IVE3 1493 aa16.21■□□□□ 0.18
PCCA-210ENST00000621936 CDC42BPBQ9Y5S2 1711 aa16.2■□□□□ 0.18
PCCA-210ENST00000621936 SAMD9LQ8IVG5 1584 aa16.2■□□□□ 0.18
PCCA-210ENST00000621936 UHRF1BP1LA0JNW5 1464 aa16.19■□□□□ 0.18
PCCA-210ENST00000621936 RALGAPBQ86X10 1494 aa16.19■□□□□ 0.18
PCCA-210ENST00000621936 NUP155O75694 1391 aa16.19■□□□□ 0.18
PCCA-210ENST00000621936 KIF15Q9NS87 1388 aa16.19■□□□□ 0.18
PCCA-210ENST00000621936 PRKRIP1Q9H875 184 aaPredicted RBP16.18■□□□□ 0.18
PCCA-210ENST00000621936 KIF7Q2M1P5 1343 aa16.18■□□□□ 0.18
PCCA-210ENST00000621936 C11orf95C9JLR9 678 aaPredicted RBP16.17■□□□□ 0.18
PCCA-210ENST00000621936 KDM5CP41229 1560 aa16.17■□□□□ 0.18
PCCA-210ENST00000621936 ROCK2O75116 1388 aaKnown RBP16.17■□□□□ 0.18
PCCA-210ENST00000621936 ERICH6BQ5W0A0 696 aa16.16■□□□□ 0.18
PCCA-210ENST00000621936 FKBP8Q14318 412 aa16.16■□□□□ 0.18
PCCA-210ENST00000621936 HNRNPMP52272 730 aaKnown RBP eCLIP16.15■□□□□ 0.18
PCCA-210ENST00000621936 MYO5CQ9NQX4 1742 aa16.15■□□□□ 0.18
PCCA-210ENST00000621936 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.15■□□□□ 0.18
PCCA-210ENST00000621936 UNC13BO14795 1591 aa16.15■□□□□ 0.18
PCCA-210ENST00000621936 PLXNC1O60486 1568 aa16.15■□□□□ 0.18
PCCA-210ENST00000621936 USP47Q96K76 1375 aa16.14■□□□□ 0.17
PCCA-210ENST00000621936 ARHGAP5Q13017 1502 aa16.13■□□□□ 0.17
PCCA-210ENST00000621936 ERCC6L2Q5T890 1561 aa16.13■□□□□ 0.17
PCCA-210ENST00000621936 TTC37Q6PGP7 1564 aa16.12■□□□□ 0.17
PCCA-210ENST00000621936 FAM135AQ9P2D6 1515 aa16.11■□□□□ 0.17
PCCA-210ENST00000621936 HNRNPUQ00839 825 aaKnown RBP eCLIP16.11■□□□□ 0.17
PCCA-210ENST00000621936 ZCCHC11Q5TAX3 1644 aaKnown RBP16.1■□□□□ 0.17
PCCA-210ENST00000621936 BCORL1Q5H9F3 1711 aa16.09■□□□□ 0.17
PCCA-210ENST00000621936 DHX29Q7Z478 1369 aaKnown RBP16.09■□□□□ 0.17
PCCA-210ENST00000621936 KTN1Q86UP2 1357 aaKnown RBP16.09■□□□□ 0.17
PCCA-210ENST00000621936 SYCP2Q9BX26 1530 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms