RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 CHD1O14646 1710 aa24.94■■□□□ 1.58
TRA2A-212ENST00000621813 PRG4Q92954 1404 aaPredicted RBP24.93■■□□□ 1.58
TRA2A-212ENST00000621813 RRP7BPQ9NSQ0 103 aa24.91■■□□□ 1.58
TRA2A-212ENST00000621813 TONSLQ96HA7 1378 aa24.9■■□□□ 1.58
TRA2A-212ENST00000621813 KIF14Q15058 1648 aa24.9■■□□□ 1.58
TRA2A-212ENST00000621813 CHIC2Q9UKJ5 165 aa24.9■■□□□ 1.58
TRA2A-212ENST00000621813 PPP1R15AO75807 674 aaPredicted RBP24.89■■□□□ 1.58
TRA2A-212ENST00000621813 SUPT16HQ9Y5B9 1047 aaKnown RBP24.89■■□□□ 1.58
TRA2A-212ENST00000621813 ABCC5O15440 1437 aa24.89■■□□□ 1.58
TRA2A-212ENST00000621813 YTHDC1Q96MU7 727 aaKnown RBP24.88■■□□□ 1.57
TRA2A-212ENST00000621813 ADGBQ8N7X0 1667 aa24.87■■□□□ 1.57
TRA2A-212ENST00000621813 GPATCH8Q9UKJ3 1502 aaKnown RBP24.87■■□□□ 1.57
TRA2A-212ENST00000621813 KDM6BO15054 1643 aa24.87■■□□□ 1.57
TRA2A-212ENST00000621813 CAMSAP2Q08AD1 1489 aa24.86■■□□□ 1.57
TRA2A-212ENST00000621813 MYT1LQ9UL68 1186 aa24.86■■□□□ 1.57
TRA2A-212ENST00000621813 SHROOM2Q13796 1616 aa24.85■■□□□ 1.57
TRA2A-212ENST00000621813 CROCC2H7BZ55 1655 aa24.85■■□□□ 1.57
TRA2A-212ENST00000621813 ATP10BO94823 1461 aa24.84■■□□□ 1.57
TRA2A-212ENST00000621813 CFDP1Q9UEE9 299 aaPredicted RBP24.82■■□□□ 1.56
TRA2A-212ENST00000621813 CDC42BPAQ5VT25 1732 aa24.82■■□□□ 1.56
TRA2A-212ENST00000621813 PLEKHD1A6NEE1 506 aa24.81■■□□□ 1.56
TRA2A-212ENST00000621813 PTPRGP23470 1445 aa24.8■■□□□ 1.56
TRA2A-212ENST00000621813 DENND4BO75064 1496 aaPredicted RBP24.78■■□□□ 1.56
TRA2A-212ENST00000621813 ZNF644Q9H582 1327 aaPredicted RBP24.78■■□□□ 1.56
TRA2A-212ENST00000621813 TRIM52Q96A61 297 aa24.78■■□□□ 1.56
TRA2A-212ENST00000621813 ADGRL2O95490 1459 aa24.77■■□□□ 1.56
TRA2A-212ENST00000621813 ABCC10Q5T3U5 1492 aa24.77■■□□□ 1.56
TRA2A-212ENST00000621813 MPHOSPH9Q99550 1183 aa24.74■■□□□ 1.55
TRA2A-212ENST00000621813 KDM5BQ9UGL1 1544 aa24.71■■□□□ 1.55
TRA2A-212ENST00000621813 NCOA1Q15788 1441 aa24.71■■□□□ 1.55
TRA2A-212ENST00000621813 SHANK2Q9UPX8 1470 aa24.7■■□□□ 1.55
TRA2A-212ENST00000621813 ANKRD30AQ9BXX3 1397 aa24.67■■□□□ 1.54
TRA2A-212ENST00000621813 ARHGEF5Q12774 1597 aa24.64■■□□□ 1.54
TRA2A-212ENST00000621813 ZNF777Q9ULD5 760 aaPredicted RBP24.64■■□□□ 1.53
TRA2A-212ENST00000621813 PREX2Q70Z35 1606 aa24.64■■□□□ 1.53
TRA2A-212ENST00000621813 ABCC2Q92887 1545 aa24.61■■□□□ 1.53
TRA2A-212ENST00000621813 ANKRD30BQ9BXX2 1392 aa24.61■■□□□ 1.53
TRA2A-212ENST00000621813 CLASP1Q7Z460 1538 aa24.61■■□□□ 1.53
TRA2A-212ENST00000621813 RPRD2Q5VT52 1461 aaKnown RBP24.61■■□□□ 1.53
TRA2A-212ENST00000621813 CDC42BPBQ9Y5S2 1711 aa24.6■■□□□ 1.53
TRA2A-212ENST00000621813 PZPP20742 1482 aa24.57■■□□□ 1.52
TRA2A-212ENST00000621813 C9orf84Q5VXU9 1444 aa24.57■■□□□ 1.52
TRA2A-212ENST00000621813 ERICH6BQ5W0A0 696 aa24.57■■□□□ 1.52
TRA2A-212ENST00000621813 SLC4A1APQ9BWU0 796 aaKnown RBP24.57■■□□□ 1.52
TRA2A-212ENST00000621813 ANKRD50Q9ULJ7 1429 aa24.55■■□□□ 1.52
TRA2A-212ENST00000621813 ERCC6L2Q5T890 1561 aa24.54■■□□□ 1.52
TRA2A-212ENST00000621813 SAMD9LQ8IVG5 1584 aa24.54■■□□□ 1.52
TRA2A-212ENST00000621813 DDX10Q13206 875 aaKnown RBP24.53■■□□□ 1.52
TRA2A-212ENST00000621813 TSPY4P0CV99 314 aa24.52■■□□□ 1.52
TRA2A-212ENST00000621813 TSPY10P0CW01 314 aa24.52■■□□□ 1.52
TRA2A-212ENST00000621813 RSPH4AQ5TD94 716 aa24.52■■□□□ 1.52
TRA2A-212ENST00000621813 UBE2Q2Q8WVN8 375 aa24.52■■□□□ 1.52
TRA2A-212ENST00000621813 OSCARQ8IYS5 282 aa24.51■■□□□ 1.51
TRA2A-212ENST00000621813 MBD5Q9P267 1494 aa24.51■■□□□ 1.51
TRA2A-212ENST00000621813 MYO5CQ9NQX4 1742 aa24.51■■□□□ 1.51
TRA2A-212ENST00000621813 CCDC141Q6ZP82 1450 aa24.5■■□□□ 1.51
TRA2A-212ENST00000621813 UHRF1BP1LA0JNW5 1464 aa24.5■■□□□ 1.51
TRA2A-212ENST00000621813 TEX14Q8IWB6 1497 aa24.5■■□□□ 1.51
TRA2A-212ENST00000621813 KIAA1107Q9UPP5 1409 aa24.49■■□□□ 1.51
TRA2A-212ENST00000621813 KDM5DQ9BY66 1539 aa24.49■■□□□ 1.51
TRA2A-212ENST00000621813 TTC37Q6PGP7 1564 aa24.48■■□□□ 1.51
TRA2A-212ENST00000621813 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.48■■□□□ 1.519e-16■■■■□ 20.9
TRA2A-212ENST00000621813 FOXD1Q16676 465 aa24.48■■□□□ 1.51
TRA2A-212ENST00000621813 L3MBTL2Q969R5 705 aa24.47■■□□□ 1.51
TRA2A-212ENST00000621813 MAST1Q9Y2H9 1570 aa24.46■■□□□ 1.51
TRA2A-212ENST00000621813 HIRIP3Q9BW71 556 aaPredicted RBP24.45■■□□□ 1.5
TRA2A-212ENST00000621813 ZCCHC11Q5TAX3 1644 aaKnown RBP24.45■■□□□ 1.5
TRA2A-212ENST00000621813 PLEKHH2Q8IVE3 1493 aa24.44■■□□□ 1.5
TRA2A-212ENST00000621813 ARHGAP5Q13017 1502 aa24.44■■□□□ 1.5
TRA2A-212ENST00000621813 KIF15Q9NS87 1388 aa24.42■■□□□ 1.5
TRA2A-212ENST00000621813 EIF4G2P78344 907 aaKnown RBP eCLIP24.41■■□□□ 1.5
TRA2A-212ENST00000621813 ANO8Q9HCE9 1232 aaPredicted RBP24.41■■□□□ 1.5
TRA2A-212ENST00000621813 HNRNPMP52272 730 aaKnown RBP eCLIP24.4■■□□□ 1.5
TRA2A-212ENST00000621813 SYCP2Q9BX26 1530 aa24.39■■□□□ 1.5
TRA2A-212ENST00000621813 RBM19Q9Y4C8 960 aaKnown RBP24.39■■□□□ 1.49
TRA2A-212ENST00000621813 ANP32CO43423 234 aa24.38■■□□□ 1.49
TRA2A-212ENST00000621813 CCER2I3L3R5 266 aa24.37■■□□□ 1.49
TRA2A-212ENST00000621813 NUP155O75694 1391 aa24.36■■□□□ 1.49
TRA2A-212ENST00000621813 PLXNC1O60486 1568 aa24.36■■□□□ 1.49
TRA2A-212ENST00000621813 HSPA5P11021 654 aaKnown RBP24.36■■□□□ 1.49
TRA2A-212ENST00000621813 PKD2Q13563 968 aa24.36■■□□□ 1.49
TRA2A-212ENST00000621813 POLR1AO95602 1720 aaPredicted RBP24.34■■□□□ 1.49
TRA2A-212ENST00000621813 PLCH2O75038 1416 aa24.32■■□□□ 1.48
TRA2A-212ENST00000621813 UNC13BO14795 1591 aa24.31■■□□□ 1.48
TRA2A-212ENST00000621813 SLC24A1O60721 1099 aa24.29■■□□□ 1.48
TRA2A-212ENST00000621813 ARAP3Q8WWN8 1544 aa24.29■■□□□ 1.48
TRA2A-212ENST00000621813 ARHGEF12Q9NZN5 1544 aa24.29■■□□□ 1.48
TRA2A-212ENST00000621813 FANCIQ9NVI1 1328 aa24.28■■□□□ 1.48
TRA2A-212ENST00000621813 NBPF8Q3BBV2 869 aa24.28■■□□□ 1.48
TRA2A-212ENST00000621813 FAM135AQ9P2D6 1515 aa24.27■■□□□ 1.48
TRA2A-212ENST00000621813 WASHC2AQ641Q2 1341 aa24.26■■□□□ 1.47
TRA2A-212ENST00000621813 SPATA31E1Q6ZUB1 1445 aa24.24■■□□□ 1.47
TRA2A-212ENST00000621813 ABCC1P33527 1531 aa24.24■■□□□ 1.47
TRA2A-212ENST00000621813 DUOX2Q9NRD8 1548 aa24.24■■□□□ 1.47
TRA2A-212ENST00000621813 EFCAB2Q5VUJ9 269 aa24.23■■□□□ 1.47
TRA2A-212ENST00000621813 KCNH8Q96L42 1107 aa24.23■■□□□ 1.47
TRA2A-212ENST00000621813 UHRF1BP1Q6BDS2 1440 aa24.23■■□□□ 1.47
TRA2A-212ENST00000621813 DEKP35659 375 aaKnown RBP24.21■■□□□ 1.47
TRA2A-212ENST00000621813 IQGAP3Q86VI3 1631 aa24.21■■□□□ 1.47
TRA2A-212ENST00000621813 CNTLNQ9NXG0 1405 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms