RNA–Protein interactions for RNA: ENST00000621323.4

PDE4D-227, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-227ENST00000621323 KIAA0556O60303 1618 aa11.53□□□□□ -0.56
PDE4D-227ENST00000621323 UGGT2Q9NYU1 1516 aa11.52□□□□□ -0.57
PDE4D-227ENST00000621323 CARMIL1Q5VZK9 1371 aa11.52□□□□□ -0.57
PDE4D-227ENST00000621323 KIF27Q86VH2 1401 aa11.52□□□□□ -0.57
PDE4D-227ENST00000621323 RAPGEF3O95398 923 aa11.5□□□□□ -0.57
PDE4D-227ENST00000621323 KCNH8Q96L42 1107 aa11.5□□□□□ -0.57
PDE4D-227ENST00000621323 ARHGEF40Q8TER5 1519 aa11.49□□□□□ -0.57
PDE4D-227ENST00000621323 ABCA8O94911 1581 aa11.48□□□□□ -0.57
PDE4D-227ENST00000621323 ARID4BQ4LE39 1312 aaPredicted RBP11.47□□□□□ -0.57
PDE4D-227ENST00000621323 RBM42Q9BTD8 480 aaKnown RBP11.47□□□□□ -0.57
PDE4D-227ENST00000621323 ATF5Q9Y2D1 282 aaPredicted RBP11.47□□□□□ -0.57
PDE4D-227ENST00000621323 AMER1Q5JTC6 1135 aaPredicted RBP11.46□□□□□ -0.57
PDE4D-227ENST00000621323 SIGLEC1Q9BZZ2 1709 aa11.46□□□□□ -0.58
PDE4D-227ENST00000621323 PHLDB1Q86UU1 1377 aa11.44□□□□□ -0.58
PDE4D-227ENST00000621323 APLP2Q06481 763 aa11.44□□□□□ -0.58
PDE4D-227ENST00000621323 STRCQ7RTU9 1775 aa11.44□□□□□ -0.58
PDE4D-227ENST00000621323 YEATS2Q9ULM3 1422 aa11.43□□□□□ -0.58
PDE4D-227ENST00000621323 ABCA9Q8IUA7 1624 aa11.42□□□□□ -0.58
PDE4D-227ENST00000621323 ZNF219Q9P2Y4 722 aaPredicted RBP11.42□□□□□ -0.58
PDE4D-227ENST00000621323 NEO1Q92859 1461 aa11.42□□□□□ -0.58
PDE4D-227ENST00000621323 LTBP4Q8N2S1 1624 aa11.42□□□□□ -0.58
PDE4D-227ENST00000621323 TTC37Q6PGP7 1564 aa11.41□□□□□ -0.58
PDE4D-227ENST00000621323 RTN4Q9NQC3 1192 aaKnown RBP11.39□□□□□ -0.59
PDE4D-227ENST00000621323 IQSEC2Q5JU85 1478 aa11.38□□□□□ -0.59
PDE4D-227ENST00000621323 PREX1Q8TCU6 1659 aa11.37□□□□□ -0.59
PDE4D-227ENST00000621323 FANCAO15360 1455 aa11.37□□□□□ -0.59
PDE4D-227ENST00000621323 RICTORQ6R327 1708 aa11.36□□□□□ -0.59
PDE4D-227ENST00000621323 ATP10BO94823 1461 aa11.36□□□□□ -0.59
PDE4D-227ENST00000621323 FER1L4A9Z1Z3 1794 aa11.36□□□□□ -0.59
PDE4D-227ENST00000621323 PTPRTO14522 1441 aa11.35□□□□□ -0.59
PDE4D-227ENST00000621323 FHOD3Q2V2M9 1422 aa11.35□□□□□ -0.59
PDE4D-227ENST00000621323 POGZQ7Z3K3 1410 aa11.35□□□□□ -0.59
PDE4D-227ENST00000621323 ZMYM4Q5VZL5 1548 aa11.35□□□□□ -0.59
PDE4D-227ENST00000621323 AKNAQ7Z591 1439 aa11.35□□□□□ -0.59
PDE4D-227ENST00000621323 ARHGEF12Q9NZN5 1544 aa11.34□□□□□ -0.59
PDE4D-227ENST00000621323 MED1Q15648 1581 aaPredicted RBP11.33□□□□□ -0.6
PDE4D-227ENST00000621323 DENND4BO75064 1496 aaPredicted RBP11.33□□□□□ -0.6
PDE4D-227ENST00000621323 RAPGEF2Q9Y4G8 1499 aa11.33□□□□□ -0.6
PDE4D-227ENST00000621323 ARID3CA6NKF2 412 aa11.33□□□□□ -0.6
PDE4D-227ENST00000621323 ZFYVE16Q7Z3T8 1539 aa11.32□□□□□ -0.6
PDE4D-227ENST00000621323 MLECQ14165 292 aa11.31□□□□□ -0.6
PDE4D-227ENST00000621323 UHRF1BP1Q6BDS2 1440 aa11.3□□□□□ -0.6
PDE4D-227ENST00000621323 SUPT5HO00267 1087 aaKnown RBP11.3□□□□□ -0.6
PDE4D-227ENST00000621323 CEBPAP49715 358 aaPredicted RBP11.3□□□□□ -0.6
PDE4D-227ENST00000621323 GOLGA3Q08378 1498 aa11.3□□□□□ -0.6
PDE4D-227ENST00000621323 EFCAB5A4FU69 1503 aa11.29□□□□□ -0.6
PDE4D-227ENST00000621323 NCOA1Q15788 1441 aa11.26□□□□□ -0.61
PDE4D-227ENST00000621323 HECW1Q76N89 1606 aa11.26□□□□□ -0.61
PDE4D-227ENST00000621323 MAGI2Q86UL8 1455 aa11.25□□□□□ -0.61
PDE4D-227ENST00000621323 CTTNBP2Q8WZ74 1663 aa11.25□□□□□ -0.61
PDE4D-227ENST00000621323 UBAP1LF5GYI3 381 aa11.24□□□□□ -0.61
PDE4D-227ENST00000621323 HAX1O00165 279 aa11.24□□□□□ -0.61
PDE4D-227ENST00000621323 ZNF335Q9H4Z2 1342 aaPredicted RBP11.22□□□□□ -0.61
PDE4D-227ENST00000621323 C9orf84Q5VXU9 1444 aa11.21□□□□□ -0.61
PDE4D-227ENST00000621323 CFAP74Q9C0B2 1584 aa11.2□□□□□ -0.62
PDE4D-227ENST00000621323 ATP10AO60312 1499 aa11.2□□□□□ -0.62
PDE4D-227ENST00000621323 HSPA1LP34931 641 aa11.2□□□□□ -0.62
PDE4D-227ENST00000621323 NUP153P49790 1475 aaKnown RBP11.19□□□□□ -0.62
PDE4D-227ENST00000621323 PIP4P2Q8N4L2 257 aa11.19□□□□□ -0.62
PDE4D-227ENST00000621323 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.19□□□□□ -0.62
PDE4D-227ENST00000621323 SETD1BQ9UPS6 1966 aaKnown RBP11.18□□□□□ -0.62
PDE4D-227ENST00000621323 SLC24A1O60721 1099 aa11.18□□□□□ -0.62
PDE4D-227ENST00000621323 RAPGEF6Q8TEU7 1601 aa11.17□□□□□ -0.62
PDE4D-227ENST00000621323 C3P01024 1663 aa11.17□□□□□ -0.62
PDE4D-227ENST00000621323 SRCAPQ6ZRS2 3230 aa11.16□□□□□ -0.62
PDE4D-227ENST00000621323 P3H3Q8IVL6 736 aa11.15□□□□□ -0.62
PDE4D-227ENST00000621323 CAMSAP1Q5T5Y3 1602 aa11.15□□□□□ -0.62
PDE4D-227ENST00000621323 SCAPERQ9BY12 1400 aa11.15□□□□□ -0.62
PDE4D-227ENST00000621323 TRAPPC8Q9Y2L5 1435 aa11.15□□□□□ -0.62
PDE4D-227ENST00000621323 SAMD9Q5K651 1589 aa11.13□□□□□ -0.63
PDE4D-227ENST00000621323 NCKAP5LQ9HCH0 1330 aa11.12□□□□□ -0.63
PDE4D-227ENST00000621323 ALKQ9UM73 1620 aa11.11□□□□□ -0.63
PDE4D-227ENST00000621323 SPDYE4A6NLX3 237 aa11.11□□□□□ -0.63
PDE4D-227ENST00000621323 POLA2Q14181 598 aa11.11□□□□□ -0.63
PDE4D-227ENST00000621323 PLSCR2Q9NRY7 297 aa11.11□□□□□ -0.63
PDE4D-227ENST00000621323 PRXQ9BXM0 1461 aa11.11□□□□□ -0.63
PDE4D-227ENST00000621323 DIP2CQ9Y2E4 1556 aa11.11□□□□□ -0.63
PDE4D-227ENST00000621323 TCOF1Q13428 1488 aaKnown RBP11.1□□□□□ -0.63
PDE4D-227ENST00000621323 REREQ9P2R6 1566 aa11.1□□□□□ -0.63
PDE4D-227ENST00000621323 KDM5CP41229 1560 aa11.09□□□□□ -0.63
PDE4D-227ENST00000621323 PIP4K2BP78356 416 aa11.09□□□□□ -0.63
PDE4D-227ENST00000621323 RGS17Q9UGC6 210 aaPredicted RBP11.09□□□□□ -0.63
PDE4D-227ENST00000621323 FBXO3Q9UK99 471 aa11.08□□□□□ -0.64
PDE4D-227ENST00000621323 PLCH2O75038 1416 aa11.08□□□□□ -0.64
PDE4D-227ENST00000621323 PLA2R1Q13018 1463 aa11.07□□□□□ -0.64
PDE4D-227ENST00000621323 EVX2Q03828 476 aa11.07□□□□□ -0.64
PDE4D-227ENST00000621323 AGLP35573 1532 aa11.07□□□□□ -0.64
PDE4D-227ENST00000621323 ABCA6Q8N139 1617 aa11.06□□□□□ -0.64
PDE4D-227ENST00000621323 NPATQ14207 1427 aa11.06□□□□□ -0.64
PDE4D-227ENST00000621323 PLEKHD1A6NEE1 506 aa11.05□□□□□ -0.64
PDE4D-227ENST00000621323 ZNF518AQ6AHZ1 1483 aa11.05□□□□□ -0.64
PDE4D-227ENST00000621323 ZNF142P52746 1687 aaPredicted RBP11.04□□□□□ -0.64
PDE4D-227ENST00000621323 AKT1S1Q96B36 256 aa11.03□□□□□ -0.64
PDE4D-227ENST00000621323 MYO3AQ8NEV4 1616 aa11.02□□□□□ -0.64
PDE4D-227ENST00000621323 CNTLNQ9NXG0 1405 aa11.02□□□□□ -0.64
PDE4D-227ENST00000621323 PKD2Q13563 968 aa11.02□□□□□ -0.65
PDE4D-227ENST00000621323 AFAP1Q8N556 730 aa11.02□□□□□ -0.65
PDE4D-227ENST00000621323 CPS1P31327 1500 aa11.01□□□□□ -0.65
PDE4D-227ENST00000621323 CDK13Q14004 1512 aaKnown RBP11.01□□□□□ -0.65
PDE4D-227ENST00000621323 TOM1O60784 492 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms