RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 EIF4G2P78344 907 aaKnown RBP eCLIP11.23□□□□□ -0.61
PTPDC1-204ENST00000620992 PTPN23Q9H3S7 1636 aa11.22□□□□□ -0.61
PTPDC1-204ENST00000620992 NPM2Q86SE8 214 aaKnown RBP11.22□□□□□ -0.61
PTPDC1-204ENST00000620992 MPHOSPH9Q99550 1183 aa11.21□□□□□ -0.62
PTPDC1-204ENST00000620992 LMOD2Q6P5Q4 547 aa11.2□□□□□ -0.62
PTPDC1-204ENST00000620992 L3MBTL2Q969R5 705 aa11.2□□□□□ -0.62
PTPDC1-204ENST00000620992 ANP32EQ9BTT0 268 aa11.19□□□□□ -0.62
PTPDC1-204ENST00000620992 WASHC2AQ641Q2 1341 aa11.19□□□□□ -0.62
PTPDC1-204ENST00000620992 GRIN2BQ13224 1484 aa11.19□□□□□ -0.62
PTPDC1-204ENST00000620992 TMC1Q8TDI8 760 aa11.19□□□□□ -0.62
PTPDC1-204ENST00000620992 SUPT6HQ7KZ85 1726 aaKnown RBP11.19□□□□□ -0.62
PTPDC1-204ENST00000620992 RBM19Q9Y4C8 960 aaKnown RBP11.18□□□□□ -0.62
PTPDC1-204ENST00000620992 EHBP1L1Q8N3D4 1523 aa11.18□□□□□ -0.62
PTPDC1-204ENST00000620992 PLEKHD1A6NEE1 506 aa11.17□□□□□ -0.62
PTPDC1-204ENST00000620992 PPM1GO15355 546 aaPredicted RBP11.17□□□□□ -0.62
PTPDC1-204ENST00000620992 RTL5Q5HYW3 569 aaPredicted RBP11.17□□□□□ -0.62
PTPDC1-204ENST00000620992 MRS2Q9HD23 443 aa11.16□□□□□ -0.62
PTPDC1-204ENST00000620992 LAMC3Q9Y6N6 1575 aa11.15□□□□□ -0.62
PTPDC1-204ENST00000620992 ARXQ96QS3 562 aa11.15□□□□□ -0.62
PTPDC1-204ENST00000620992 SAMD9Q5K651 1589 aa11.14□□□□□ -0.63
PTPDC1-204ENST00000620992 CDK13Q14004 1512 aaKnown RBP11.14□□□□□ -0.63
PTPDC1-204ENST00000620992 ZNF644Q9H582 1327 aaPredicted RBP11.14□□□□□ -0.63
PTPDC1-204ENST00000620992 CCDC184Q52MB2 194 aa11.14□□□□□ -0.63
PTPDC1-204ENST00000620992 MAGI3Q5TCQ9 1506 aa11.13□□□□□ -0.63
PTPDC1-204ENST00000620992 UGGT2Q9NYU1 1516 aa11.13□□□□□ -0.63
PTPDC1-204ENST00000620992 ABCA5Q8WWZ7 1642 aa11.13□□□□□ -0.63
PTPDC1-204ENST00000620992 SOX12O15370 315 aa11.12□□□□□ -0.63
PTPDC1-204ENST00000620992 LRRIQ1Q96JM4 1722 aa11.12□□□□□ -0.63
PTPDC1-204ENST00000620992 EPRSP07814 1512 aaKnown RBP11.12□□□□□ -0.63
PTPDC1-204ENST00000620992 C11orf95C9JLR9 678 aaPredicted RBP11.12□□□□□ -0.63
PTPDC1-204ENST00000620992 HAP1P54257 671 aaPredicted RBP11.11□□□□□ -0.63
PTPDC1-204ENST00000620992 CFDP1Q9UEE9 299 aaPredicted RBP11.11□□□□□ -0.63
PTPDC1-204ENST00000620992 TNNT2P45379 298 aaPredicted RBP11.1□□□□□ -0.63
PTPDC1-204ENST00000620992 NBPF8Q3BBV2 869 aa11.1□□□□□ -0.63
PTPDC1-204ENST00000620992 PRKRIP1Q9H875 184 aaPredicted RBP11.1□□□□□ -0.63
PTPDC1-204ENST00000620992 HECW1Q76N89 1606 aa11.1□□□□□ -0.63
PTPDC1-204ENST00000620992 THOC2Q8NI27 1593 aaKnown RBP11.09□□□□□ -0.63
PTPDC1-204ENST00000620992 SAFB2Q14151 953 aaKnown RBP eCLIP11.08□□□□□ -0.63
PTPDC1-204ENST00000620992 NEUROD2Q15784 382 aa11.08□□□□□ -0.64
PTPDC1-204ENST00000620992 IQGAP2Q13576 1575 aa11.08□□□□□ -0.64
PTPDC1-204ENST00000620992 CNTLNQ9NXG0 1405 aa11.08□□□□□ -0.64
PTPDC1-204ENST00000620992 KDM6BO15054 1643 aa11.08□□□□□ -0.64
PTPDC1-204ENST00000620992 CCDC7Q96M83 1385 aa11.08□□□□□ -0.64
PTPDC1-204ENST00000620992 MIA2Q96PC5 1412 aa11.07□□□□□ -0.64
PTPDC1-204ENST00000620992 KIF21AQ7Z4S6 1674 aa11.07□□□□□ -0.64
PTPDC1-204ENST00000620992 B4GALNT3Q6L9W6 998 aa11.06□□□□□ -0.64
PTPDC1-204ENST00000620992 KDM5BQ9UGL1 1544 aa11.06□□□□□ -0.64
PTPDC1-204ENST00000620992 TCOF1Q13428 1488 aaKnown RBP11.06□□□□□ -0.64
PTPDC1-204ENST00000620992 KIF7Q2M1P5 1343 aa11.05□□□□□ -0.64
PTPDC1-204ENST00000620992 DENND4BO75064 1496 aaPredicted RBP11.05□□□□□ -0.64
PTPDC1-204ENST00000620992 DAPK1P53355 1430 aa11.04□□□□□ -0.64
PTPDC1-204ENST00000620992 ARHGEF11O15085 1522 aa11.04□□□□□ -0.64
PTPDC1-204ENST00000620992 PPP4R2Q9NY27 417 aa11.04□□□□□ -0.64
PTPDC1-204ENST00000620992 ANKRD30BQ9BXX2 1392 aa11.04□□□□□ -0.64
PTPDC1-204ENST00000620992 PKD2Q13563 968 aa11.03□□□□□ -0.64
PTPDC1-204ENST00000620992 GGT6Q6P531 493 aa11.03□□□□□ -0.64
PTPDC1-204ENST00000620992 WDR43Q15061 677 aaKnown RBP eCLIP11.02□□□□□ -0.64
PTPDC1-204ENST00000620992 ABCC5O15440 1437 aa11.02□□□□□ -0.64
PTPDC1-204ENST00000620992 TARBP1Q13395 1621 aaKnown RBP11.02□□□□□ -0.65
PTPDC1-204ENST00000620992 AKNAQ7Z591 1439 aa11.02□□□□□ -0.65
PTPDC1-204ENST00000620992 GCC2Q8IWJ2 1684 aa11.01□□□□□ -0.65
PTPDC1-204ENST00000620992 NCOA1Q15788 1441 aa11.01□□□□□ -0.65
PTPDC1-204ENST00000620992 ZNF608Q9ULD9 1512 aaPredicted RBP11.01□□□□□ -0.65
PTPDC1-204ENST00000620992 WDR62O43379 1518 aa11.01□□□□□ -0.65
PTPDC1-204ENST00000620992 PRG4Q92954 1404 aaPredicted RBP11□□□□□ -0.65
PTPDC1-204ENST00000620992 RPRD2Q5VT52 1461 aaKnown RBP11□□□□□ -0.65
PTPDC1-204ENST00000620992 ZBED9Q6R2W3 1325 aa11□□□□□ -0.65
PTPDC1-204ENST00000620992 PBRM1Q86U86 1689 aa10.99□□□□□ -0.65
PTPDC1-204ENST00000620992 HSP90AA1P07900 732 aaKnown RBP10.99□□□□□ -0.65
PTPDC1-204ENST00000620992 ROCK1Q13464 1354 aa10.99□□□□□ -0.65
PTPDC1-204ENST00000620992 ADAMTS12P58397 1594 aa10.99□□□□□ -0.65
PTPDC1-204ENST00000620992 MRC2Q9UBG0 1479 aa10.98□□□□□ -0.65
PTPDC1-204ENST00000620992 MSH5O43196 834 aa10.98□□□□□ -0.65
PTPDC1-204ENST00000620992 CARD11Q9BXL7 1154 aa10.98□□□□□ -0.65
PTPDC1-204ENST00000620992 USP47Q96K76 1375 aa10.97□□□□□ -0.65
PTPDC1-204ENST00000620992 LAS1LQ9Y4W2 734 aaKnown RBP10.97□□□□□ -0.65
PTPDC1-204ENST00000620992 NUP153P49790 1475 aaKnown RBP10.97□□□□□ -0.65
PTPDC1-204ENST00000620992 CARMIL2Q6F5E8 1435 aa10.96□□□□□ -0.65
PTPDC1-204ENST00000620992 POGKQ9P215 609 aa10.96□□□□□ -0.65
PTPDC1-204ENST00000620992 KIAA0586Q9BVV6 1533 aa10.96□□□□□ -0.66
PTPDC1-204ENST00000620992 ERICH6BQ5W0A0 696 aa10.96□□□□□ -0.66
PTPDC1-204ENST00000620992 STK26Q9P289 416 aa10.96□□□□□ -0.66
PTPDC1-204ENST00000620992 TAOK2Q9UL54 1235 aa10.95□□□□□ -0.66
PTPDC1-204ENST00000620992 NUP155O75694 1391 aa10.95□□□□□ -0.66
PTPDC1-204ENST00000620992 ANKRD30AQ9BXX3 1397 aa10.95□□□□□ -0.66
PTPDC1-204ENST00000620992 TEX14Q8IWB6 1497 aa10.95□□□□□ -0.66
PTPDC1-204ENST00000620992 CCDC136Q96JN2 1154 aa10.95□□□□□ -0.66
PTPDC1-204ENST00000620992 PLB1Q6P1J6 1458 aa10.94□□□□□ -0.66
PTPDC1-204ENST00000620992 DCAF11Q8TEB1 546 aa10.94□□□□□ -0.66
PTPDC1-204ENST00000620992 NUTM2DQ5VT03 806 aaPredicted RBP10.94□□□□□ -0.66
PTPDC1-204ENST00000620992 DISP1Q96F81 1524 aa10.94□□□□□ -0.66
PTPDC1-204ENST00000620992 TROQ12816 1431 aaPredicted RBP10.94□□□□□ -0.66
PTPDC1-204ENST00000620992 JPH4Q96JJ6 628 aa10.93□□□□□ -0.66
PTPDC1-204ENST00000620992 CAMSAP2Q08AD1 1489 aa10.93□□□□□ -0.66
PTPDC1-204ENST00000620992 IFT140Q96RY7 1462 aa10.93□□□□□ -0.66
PTPDC1-204ENST00000620992 KIAA0556O60303 1618 aa10.93□□□□□ -0.66
PTPDC1-204ENST00000620992 DNMT1P26358 1616 aaKnown RBP10.93□□□□□ -0.66
PTPDC1-204ENST00000620992 NUTM2FA1L443 756 aa10.93□□□□□ -0.66
PTPDC1-204ENST00000620992 FANCIQ9NVI1 1328 aa10.92□□□□□ -0.66
PTPDC1-204ENST00000620992 KIAA1107Q9UPP5 1409 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms