RNA–Protein interactions for RNA: ENST00000620879.4

GTF2I-218, Transcript of general transcription factor IIi, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GTF2I, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-218ENST00000620879 ANP32AP39687 249 aaKnown RBP16.28■□□□□ 0.2
GTF2I-218ENST00000620879 SRPK2P78362 688 aaKnown RBP16.28■□□□□ 0.2
GTF2I-218ENST00000620879 CFAP53Q96M91 514 aa16.28■□□□□ 0.2
GTF2I-218ENST00000620879 DHX57Q6P158 1386 aaKnown RBP16.25■□□□□ 0.19
GTF2I-218ENST00000620879 RSPH4AQ5TD94 716 aa16.24■□□□□ 0.19
GTF2I-218ENST00000620879 WASHC2CQ9Y4E1 1318 aa16.24■□□□□ 0.19
GTF2I-218ENST00000620879 U2SURPO15042 1029 aaKnown RBP16.23■□□□□ 0.19
GTF2I-218ENST00000620879 PHLDB1Q86UU1 1377 aa16.22■□□□□ 0.19
GTF2I-218ENST00000620879 KIF21BO75037 1637 aa16.21■□□□□ 0.19
GTF2I-218ENST00000620879 ARAP1Q96P48 1450 aa16.21■□□□□ 0.19
GTF2I-218ENST00000620879 HAP1P54257 671 aaPredicted RBP16.21■□□□□ 0.18
GTF2I-218ENST00000620879 ROCK2O75116 1388 aaKnown RBP16.2■□□□□ 0.18
GTF2I-218ENST00000620879 CUX1P39880 1505 aa16.2■□□□□ 0.18
GTF2I-218ENST00000620879 LAS1LQ9Y4W2 734 aaKnown RBP16.2■□□□□ 0.18
GTF2I-218ENST00000620879 POLA1P09884 1462 aaPredicted RBP16.2■□□□□ 0.18
GTF2I-218ENST00000620879 TOPBP1Q92547 1522 aa16.19■□□□□ 0.18
GTF2I-218ENST00000620879 HMGXB3Q12766 1538 aa16.17■□□□□ 0.18
GTF2I-218ENST00000620879 GRIN2BQ13224 1484 aa16.17■□□□□ 0.18
GTF2I-218ENST00000620879 NUDCQ9Y266 331 aa16.15■□□□□ 0.18
GTF2I-218ENST00000620879 MAPK8IP3Q9UPT6 1336 aa16.15■□□□□ 0.18
GTF2I-218ENST00000620879 HDGFP51858 240 aaKnown RBP16.14■□□□□ 0.17
GTF2I-218ENST00000620879 MORC1Q86VD1 984 aa16.14■□□□□ 0.17
GTF2I-218ENST00000620879 PRXQ9BXM0 1461 aa16.14■□□□□ 0.17
GTF2I-218ENST00000620879 ST20-MTHFSA0A0A6YYL1 179 aa16.13■□□□□ 0.17
GTF2I-218ENST00000620879 TRAK1Q9UPV9 953 aa16.12■□□□□ 0.17
GTF2I-218ENST00000620879 FGD6Q6ZV73 1430 aa16.12■□□□□ 0.17
GTF2I-218ENST00000620879 FRAT1Q92837 279 aaPredicted RBP16.12■□□□□ 0.17
GTF2I-218ENST00000620879 NUTM2FA1L443 756 aa16.11■□□□□ 0.17
GTF2I-218ENST00000620879 AFAP1Q8N556 730 aa16.11■□□□□ 0.17
GTF2I-218ENST00000620879 UPF2Q9HAU5 1272 aaKnown RBP16.11■□□□□ 0.17
GTF2I-218ENST00000620879 HSP90AA1P07900 732 aaKnown RBP16.1■□□□□ 0.17
GTF2I-218ENST00000620879 MRC2Q9UBG0 1479 aa16.1■□□□□ 0.17
GTF2I-218ENST00000620879 LRRC9Q6ZRR7 1453 aa16.09■□□□□ 0.17
GTF2I-218ENST00000620879 FAM69CQ0P6D2 419 aa16.09■□□□□ 0.17
GTF2I-218ENST00000620879 TOP2BQ02880 1626 aa16.08■□□□□ 0.16
GTF2I-218ENST00000620879 MYOM3Q5VTT5 1437 aa16.08■□□□□ 0.16
GTF2I-218ENST00000620879 CCER2I3L3R5 266 aa16.07■□□□□ 0.16
GTF2I-218ENST00000620879 ARXQ96QS3 562 aa16.07■□□□□ 0.16
GTF2I-218ENST00000620879 PRG4Q92954 1404 aaPredicted RBP16.07■□□□□ 0.16
GTF2I-218ENST00000620879 CCDC144AA2RUR9 1427 aa16.06■□□□□ 0.16
GTF2I-218ENST00000620879 B4GALNT3Q6L9W6 998 aa16.05■□□□□ 0.16
GTF2I-218ENST00000620879 CASKIN1Q8WXD9 1431 aa16.05■□□□□ 0.16
GTF2I-218ENST00000620879 FTSJ3Q8IY81 847 aaKnown RBP16.04■□□□□ 0.16
GTF2I-218ENST00000620879 MYH16Q9H6N6 1097 aa16.04■□□□□ 0.16
GTF2I-218ENST00000620879 NCOA2Q15596 1464 aa16.04■□□□□ 0.16
GTF2I-218ENST00000620879 KIF15Q9NS87 1388 aa16.04■□□□□ 0.16
GTF2I-218ENST00000620879 KTN1Q86UP2 1357 aaKnown RBP16.03■□□□□ 0.16
GTF2I-218ENST00000620879 PRDM2Q13029 1718 aa16.03■□□□□ 0.16
GTF2I-218ENST00000620879 PAK3O75914 559 aaPredicted RBP16.03■□□□□ 0.16
GTF2I-218ENST00000620879 ERICH3Q5RHP9 1530 aa16.03■□□□□ 0.16
GTF2I-218ENST00000620879 U2AF1L5P0DN76 240 aaPredicted RBP16.02■□□□□ 0.15
GTF2I-218ENST00000620879 U2AF1Q01081 240 aaKnown RBP eCLIP16.02■□□□□ 0.15
GTF2I-218ENST00000620879 SNAPC4Q5SXM2 1469 aa16.01■□□□□ 0.15
GTF2I-218ENST00000620879 IFT140Q96RY7 1462 aa16.01■□□□□ 0.15
GTF2I-218ENST00000620879 HDGFL2Q7Z4V5 671 aaPredicted RBP16.01■□□□□ 0.15
GTF2I-218ENST00000620879 RGS3P49796 1198 aa15.99■□□□□ 0.15
GTF2I-218ENST00000620879 ANKRD50Q9ULJ7 1429 aa15.97■□□□□ 0.15
GTF2I-218ENST00000620879 NBR1Q14596 966 aa15.96■□□□□ 0.15
GTF2I-218ENST00000620879 PANK3Q9H999 370 aa15.96■□□□□ 0.15
GTF2I-218ENST00000620879 DNMBPQ6XZF7 1577 aa15.96■□□□□ 0.15
GTF2I-218ENST00000620879 EID1Q9Y6B2 187 aa15.96■□□□□ 0.15
GTF2I-218ENST00000620879 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.95■□□□□ 0.14
GTF2I-218ENST00000620879 PPP4R2Q9NY27 417 aa15.95■□□□□ 0.14
GTF2I-218ENST00000620879 RALBP1Q15311 655 aa15.94■□□□□ 0.14
GTF2I-218ENST00000620879 CCDC146Q8IYE0 955 aa15.94■□□□□ 0.14
GTF2I-218ENST00000620879 USP47Q96K76 1375 aa15.93■□□□□ 0.14
GTF2I-218ENST00000620879 VGFO15240 615 aaPredicted RBP15.92■□□□□ 0.14
GTF2I-218ENST00000620879 NLRP13Q86W25 1043 aa15.92■□□□□ 0.14
GTF2I-218ENST00000620879 FYCO1Q9BQS8 1478 aa15.92■□□□□ 0.14
GTF2I-218ENST00000620879 MINK1Q8N4C8 1332 aaPredicted RBP15.91■□□□□ 0.14
GTF2I-218ENST00000620879 UACAQ9BZF9 1416 aa15.91■□□□□ 0.14
GTF2I-218ENST00000620879 NGDNQ8NEJ9 315 aaKnown RBP15.91■□□□□ 0.14
GTF2I-218ENST00000620879 SYNJ2O15056 1496 aa15.91■□□□□ 0.14
GTF2I-218ENST00000620879 TERF2IPQ9NYB0 399 aa15.91■□□□□ 0.14
GTF2I-218ENST00000620879 EIF3AQ14152 1382 aaKnown RBP15.91■□□□□ 0.14
GTF2I-218ENST00000620879 ABCA10Q8WWZ4 1543 aa15.9■□□□□ 0.14
GTF2I-218ENST00000620879 PRKRIP1Q9H875 184 aaPredicted RBP15.89■□□□□ 0.13
GTF2I-218ENST00000620879 UNC13AQ9UPW8 1703 aa15.89■□□□□ 0.13
GTF2I-218ENST00000620879 RAPGEF3O95398 923 aa15.88■□□□□ 0.13
GTF2I-218ENST00000620879 PNNQ9H307 717 aaKnown RBP15.88■□□□□ 0.13
GTF2I-218ENST00000620879 TMEM132EQ6IEE7 984 aa15.87■□□□□ 0.13
GTF2I-218ENST00000620879 RRBP1Q9P2E9 1410 aaKnown RBP15.87■□□□□ 0.13
GTF2I-218ENST00000620879 ZNF608Q9ULD9 1512 aaPredicted RBP15.86■□□□□ 0.13
GTF2I-218ENST00000620879 URB2Q14146 1524 aaKnown RBP15.86■□□□□ 0.13
GTF2I-218ENST00000620879 ARHGAP5Q13017 1502 aa15.86■□□□□ 0.13
GTF2I-218ENST00000620879 LTV1Q96GA3 475 aaPredicted RBP15.86■□□□□ 0.13
GTF2I-218ENST00000620879 LAMC3Q9Y6N6 1575 aa15.85■□□□□ 0.13
GTF2I-218ENST00000620879 TROQ12816 1431 aaPredicted RBP15.85■□□□□ 0.13
GTF2I-218ENST00000620879 RCAN3Q9UKA8 241 aa15.85■□□□□ 0.13
GTF2I-218ENST00000620879 RRP7AQ9Y3A4 280 aaKnown RBP15.85■□□□□ 0.13
GTF2I-218ENST00000620879 KIAA0586Q9BVV6 1533 aa15.84■□□□□ 0.13
GTF2I-218ENST00000620879 RTF1Q92541 710 aaKnown RBP15.84■□□□□ 0.13
GTF2I-218ENST00000620879 CDK13Q14004 1512 aaKnown RBP15.84■□□□□ 0.13
GTF2I-218ENST00000620879 SCAPERQ9BY12 1400 aa15.83■□□□□ 0.13
GTF2I-218ENST00000620879 PEG3Q9GZU2 1588 aa15.83■□□□□ 0.12
GTF2I-218ENST00000620879 EFCAB5A4FU69 1503 aa15.83■□□□□ 0.12
GTF2I-218ENST00000620879 CSB-PGBD3P0DP91 1061 aa15.82■□□□□ 0.12
GTF2I-218ENST00000620879 CFAP70Q5T0N1 1121 aa15.82■□□□□ 0.12
GTF2I-218ENST00000620879 NBPF1Q3BBV0 1214 aa15.81■□□□□ 0.12
GTF2I-218ENST00000620879 PLB1Q6P1J6 1458 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms