RNA–Protein interactions for RNA: ENST00000620410.1

PTPRT-212, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5 BASIC

Gene PTPRT, Length 940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-212ENST00000620410 PREX1Q8TCU6 1659 aa18.98■□□□□ 0.63
PTPRT-212ENST00000620410 HECW1Q76N89 1606 aa18.97■□□□□ 0.63
PTPRT-212ENST00000620410 DISP3Q9P2K9 1392 aa18.97■□□□□ 0.63
PTPRT-212ENST00000620410 MLECQ14165 292 aa18.97■□□□□ 0.63
PTPRT-212ENST00000620410 ARHGEF12Q9NZN5 1544 aa18.94■□□□□ 0.62
PTPRT-212ENST00000620410 SOCS7O14512 581 aa18.93■□□□□ 0.62
PTPRT-212ENST00000620410 ILDR2Q71H61 639 aa18.93■□□□□ 0.62
PTPRT-212ENST00000620410 UBTFP17480 764 aaKnown RBP18.91■□□□□ 0.62
PTPRT-212ENST00000620410 C9orf84Q5VXU9 1444 aa18.9■□□□□ 0.62
PTPRT-212ENST00000620410 SCAPERQ9BY12 1400 aa18.9■□□□□ 0.62
PTPRT-212ENST00000620410 ATP10AO60312 1499 aa18.9■□□□□ 0.62
PTPRT-212ENST00000620410 STRCQ7RTU9 1775 aa18.89■□□□□ 0.61
PTPRT-212ENST00000620410 DMRT2Q9Y5R5 561 aa18.88■□□□□ 0.61
PTPRT-212ENST00000620410 SPATA31D1Q6ZQQ2 1576 aa18.86■□□□□ 0.61
PTPRT-212ENST00000620410 PLCH2O75038 1416 aa18.86■□□□□ 0.61
PTPRT-212ENST00000620410 CDK13Q14004 1512 aaKnown RBP18.85■□□□□ 0.61
PTPRT-212ENST00000620410 ARHGAP35Q9NRY4 1499 aa18.84■□□□□ 0.61
PTPRT-212ENST00000620410 UHRF1BP1Q6BDS2 1440 aa18.84■□□□□ 0.61
PTPRT-212ENST00000620410 CEBPAP49715 358 aaPredicted RBP18.84■□□□□ 0.61
PTPRT-212ENST00000620410 MYO5CQ9NQX4 1742 aa18.83■□□□□ 0.61
PTPRT-212ENST00000620410 SETD1BQ9UPS6 1966 aaKnown RBP18.81■□□□□ 0.6
PTPRT-212ENST00000620410 ZNF518AQ6AHZ1 1483 aa18.79■□□□□ 0.6
PTPRT-212ENST00000620410 EFCAB2Q5VUJ9 269 aa18.78■□□□□ 0.6
PTPRT-212ENST00000620410 PTPRTO14522 1441 aa18.77■□□□□ 0.6
PTPRT-212ENST00000620410 KDM5CP41229 1560 aa18.76■□□□□ 0.59
PTPRT-212ENST00000620410 ATP1B4Q9UN42 357 aaPredicted RBP18.76■□□□□ 0.59
PTPRT-212ENST00000620410 C3P01024 1663 aa18.75■□□□□ 0.59
PTPRT-212ENST00000620410 REREQ9P2R6 1566 aa18.74■□□□□ 0.59
PTPRT-212ENST00000620410 DIP2CQ9Y2E4 1556 aa18.74■□□□□ 0.59
PTPRT-212ENST00000620410 FMN1Q68DA7 1419 aa18.74■□□□□ 0.59
PTPRT-212ENST00000620410 KIF14Q15058 1648 aa18.73■□□□□ 0.59
PTPRT-212ENST00000620410 ARHGAP5Q13017 1502 aa18.73■□□□□ 0.59
PTPRT-212ENST00000620410 IQSEC2Q5JU85 1478 aa18.72■□□□□ 0.59
PTPRT-212ENST00000620410 LTBP4Q8N2S1 1624 aa18.72■□□□□ 0.59
PTPRT-212ENST00000620410 AFAP1Q8N556 730 aa18.7■□□□□ 0.58
PTPRT-212ENST00000620410 MYT1LQ9UL68 1186 aa18.7■□□□□ 0.58
PTPRT-212ENST00000620410 ABCA6Q8N139 1617 aa18.7■□□□□ 0.58
PTPRT-212ENST00000620410 CDK11AQ9UQ88 783 aaPredicted RBP18.69■□□□□ 0.58
PTPRT-212ENST00000620410 LRRIQ1Q96JM4 1722 aa18.68■□□□□ 0.58
PTPRT-212ENST00000620410 ESF1Q9H501 851 aaKnown RBP18.67■□□□□ 0.58
PTPRT-212ENST00000620410 AGLP35573 1532 aa18.67■□□□□ 0.58
PTPRT-212ENST00000620410 NCOA1Q15788 1441 aa18.66■□□□□ 0.58
PTPRT-212ENST00000620410 TRAPPC8Q9Y2L5 1435 aa18.66■□□□□ 0.58
PTPRT-212ENST00000620410 MLH3Q9UHC1 1453 aa18.66■□□□□ 0.58
PTPRT-212ENST00000620410 TROQ12816 1431 aaPredicted RBP18.66■□□□□ 0.58
PTPRT-212ENST00000620410 CLIP1P30622 1438 aa18.65■□□□□ 0.58
PTPRT-212ENST00000620410 CNTLNQ9NXG0 1405 aa18.63■□□□□ 0.57
PTPRT-212ENST00000620410 CDC42BPBQ9Y5S2 1711 aa18.63■□□□□ 0.57
PTPRT-212ENST00000620410 ABCC1P33527 1531 aa18.61■□□□□ 0.57
PTPRT-212ENST00000620410 ITSN2Q9NZM3 1697 aa18.6■□□□□ 0.57
PTPRT-212ENST00000620410 CAMSAP1Q5T5Y3 1602 aa18.6■□□□□ 0.57
PTPRT-212ENST00000620410 CASKIN1Q8WXD9 1431 aa18.6■□□□□ 0.57
PTPRT-212ENST00000620410 PREX2Q70Z35 1606 aa18.6■□□□□ 0.57
PTPRT-212ENST00000620410 MROH2AA6NES4 1674 aa18.58■□□□□ 0.57
PTPRT-212ENST00000620410 KIDINS220Q9ULH0 1771 aa18.58■□□□□ 0.56
PTPRT-212ENST00000620410 NPATQ14207 1427 aa18.57■□□□□ 0.56
PTPRT-212ENST00000620410 UBAP1LF5GYI3 381 aa18.54■□□□□ 0.56
PTPRT-212ENST00000620410 ZNF335Q9H4Z2 1342 aaPredicted RBP18.52■□□□□ 0.56
PTPRT-212ENST00000620410 ZNF142P52746 1687 aaPredicted RBP18.52■□□□□ 0.56
PTPRT-212ENST00000620410 NCKAP5LQ9HCH0 1330 aa18.51■□□□□ 0.55
PTPRT-212ENST00000620410 MYO3AQ8NEV4 1616 aa18.51■□□□□ 0.55
PTPRT-212ENST00000620410 SUPT6HQ7KZ85 1726 aaKnown RBP18.51■□□□□ 0.55
PTPRT-212ENST00000620410 CDC42BPAQ5VT25 1732 aa18.5■□□□□ 0.55
PTPRT-212ENST00000620410 ZMYM3Q14202 1370 aa18.5■□□□□ 0.55
PTPRT-212ENST00000620410 CCDC18Q5T9S5 1454 aa18.5■□□□□ 0.55
PTPRT-212ENST00000620410 PLA2R1Q13018 1463 aa18.49■□□□□ 0.55
PTPRT-212ENST00000620410 FYCO1Q9BQS8 1478 aa18.49■□□□□ 0.55
PTPRT-212ENST00000620410 SAMD9LQ8IVG5 1584 aa18.49■□□□□ 0.55
PTPRT-212ENST00000620410 CLTCQ00610 1675 aaKnown RBP18.47■□□□□ 0.55
PTPRT-212ENST00000620410 PKD2Q13563 968 aa18.47■□□□□ 0.55
PTPRT-212ENST00000620410 CEP170BQ9Y4F5 1589 aaPredicted RBP18.47■□□□□ 0.55
PTPRT-212ENST00000620410 TCOF1Q13428 1488 aaKnown RBP18.46■□□□□ 0.54
PTPRT-212ENST00000620410 SYCP2Q9BX26 1530 aa18.44■□□□□ 0.54
PTPRT-212ENST00000620410 PLXNC1O60486 1568 aa18.42■□□□□ 0.54
PTPRT-212ENST00000620410 MED1Q15648 1581 aaPredicted RBP18.42■□□□□ 0.54
PTPRT-212ENST00000620410 PTPRKQ15262 1439 aa18.42■□□□□ 0.54
PTPRT-212ENST00000620410 ATP7AQ04656 1500 aa18.42■□□□□ 0.54
PTPRT-212ENST00000620410 SPAG9O60271 1321 aaKnown RBP18.42■□□□□ 0.54
PTPRT-212ENST00000620410 INO80Q9ULG1 1556 aaPredicted RBP18.4■□□□□ 0.54
PTPRT-212ENST00000620410 ZNF777Q9ULD5 760 aaPredicted RBP18.4■□□□□ 0.54
PTPRT-212ENST00000620410 PPP6R1Q9UPN7 881 aa18.4■□□□□ 0.54
PTPRT-212ENST00000620410 GPATCH8Q9UKJ3 1502 aaKnown RBP18.39■□□□□ 0.54
PTPRT-212ENST00000620410 LOC105371045A0A1W2PR82 267 aa18.39■□□□□ 0.53
PTPRT-212ENST00000620410 A2MP01023 1474 aa18.39■□□□□ 0.53
PTPRT-212ENST00000620410 HSPA1LP34931 641 aa18.37■□□□□ 0.53
PTPRT-212ENST00000620410 SCAF1Q9H7N4 1312 aaKnown RBP18.37■□□□□ 0.53
PTPRT-212ENST00000620410 CEP162Q5TB80 1403 aa18.37■□□□□ 0.53
PTPRT-212ENST00000620410 POLR1AO95602 1720 aaPredicted RBP18.35■□□□□ 0.53
PTPRT-212ENST00000620410 A2ML1A8K2U0 1454 aa18.35■□□□□ 0.53
PTPRT-212ENST00000620410 HNRNPMP52272 730 aaKnown RBP eCLIP18.35■□□□□ 0.53
PTPRT-212ENST00000620410 DNMT1P26358 1616 aaKnown RBP18.34■□□□□ 0.53
PTPRT-212ENST00000620410 CPS1P31327 1500 aa18.34■□□□□ 0.53
PTPRT-212ENST00000620410 PLEKHH2Q8IVE3 1493 aa18.34■□□□□ 0.53
PTPRT-212ENST00000620410 KIAA1107Q9UPP5 1409 aa18.34■□□□□ 0.53
PTPRT-212ENST00000620410 PIP4K2BP78356 416 aa18.34■□□□□ 0.53
PTPRT-212ENST00000620410 GGT6Q6P531 493 aa18.34■□□□□ 0.53
PTPRT-212ENST00000620410 ADGBQ8N7X0 1667 aa18.34■□□□□ 0.53
PTPRT-212ENST00000620410 TOM1O60784 492 aa18.32■□□□□ 0.52
PTPRT-212ENST00000620410 MTUS2Q5JR59 1369 aa18.31■□□□□ 0.52
PTPRT-212ENST00000620410 NEURL4Q96JN8 1562 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms