RNA–Protein interactions for RNA: ENST00000620267.1

PKD1L3-201, Transcript of polycystin 1 like 3, transient receptor potential channel interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKD1L3, Length 5,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1L3-201ENST00000620267 DDRGK1Q96HY6 314 aa13.03□□□□□ -0.32
PKD1L3-201ENST00000620267 CALD1Q05682 793 aaKnown RBP13.02□□□□□ -0.32
PKD1L3-201ENST00000620267 FGD5Q6ZNL6 1462 aa13.02□□□□□ -0.33
PKD1L3-201ENST00000620267 NPHP1O15259 732 aa13.01□□□□□ -0.33
PKD1L3-201ENST00000620267 ROCK2O75116 1388 aaKnown RBP13.01□□□□□ -0.33
PKD1L3-201ENST00000620267 LAS1LQ9Y4W2 734 aaKnown RBP13.01□□□□□ -0.33
PKD1L3-201ENST00000620267 KTN1Q86UP2 1357 aaKnown RBP13.01□□□□□ -0.33
PKD1L3-201ENST00000620267 HNRNPMP52272 730 aaKnown RBP eCLIP13□□□□□ -0.33
PKD1L3-201ENST00000620267 CC2D1BQ5T0F9 858 aaKnown RBP13□□□□□ -0.33
PKD1L3-201ENST00000620267 RAB3GAP2Q9H2M9 1393 aa12.99□□□□□ -0.33
PKD1L3-201ENST00000620267 NEUROD2Q15784 382 aa12.99□□□□□ -0.33
PKD1L3-201ENST00000620267 RTF1Q92541 710 aaKnown RBP12.99□□□□□ -0.33
PKD1L3-201ENST00000620267 ANP32EQ9BTT0 268 aa12.99□□□□□ -0.33
PKD1L3-201ENST00000620267 TERF2IPQ9NYB0 399 aa12.99□□□□□ -0.33
PKD1L3-201ENST00000620267 NCLP19338 710 aaKnown RBP12.98□□□□□ -0.33
PKD1L3-201ENST00000620267 CCER2I3L3R5 266 aa12.98□□□□□ -0.33
PKD1L3-201ENST00000620267 TNNT2P45379 298 aaPredicted RBP12.97□□□□□ -0.33
PKD1L3-201ENST00000620267 STK26Q9P289 416 aa12.97□□□□□ -0.33
PKD1L3-201ENST00000620267 CFAP44Q96MT7 982 aa12.97□□□□□ -0.33
PKD1L3-201ENST00000620267 RALBP1Q15311 655 aa12.96□□□□□ -0.33
PKD1L3-201ENST00000620267 GOLGA6L22H0YM25 854 aa12.96□□□□□ -0.34
PKD1L3-201ENST00000620267 HSPA5P11021 654 aaKnown RBP12.95□□□□□ -0.34
PKD1L3-201ENST00000620267 CDK11BP21127 795 aaKnown RBP12.94□□□□□ -0.34
PKD1L3-201ENST00000620267 GRIN2BQ13224 1484 aa12.94□□□□□ -0.34
PKD1L3-201ENST00000620267 SAFB2Q14151 953 aaKnown RBP eCLIP12.94□□□□□ -0.34
PKD1L3-201ENST00000620267 IGF1RP08069 1367 aa12.93□□□□□ -0.34
PKD1L3-201ENST00000620267 OS9Q13438 667 aaPredicted RBP12.93□□□□□ -0.34
PKD1L3-201ENST00000620267 CYB5RLQ6IPT4 315 aa12.93□□□□□ -0.34
PKD1L3-201ENST00000620267 CCDC144AA2RUR9 1427 aa12.92□□□□□ -0.34
PKD1L3-201ENST00000620267 VGFO15240 615 aaPredicted RBP12.92□□□□□ -0.34
PKD1L3-201ENST00000620267 IPO8O15397 1037 aaKnown RBP12.91□□□□□ -0.34
PKD1L3-201ENST00000620267 STAC3Q96MF2 364 aa12.91□□□□□ -0.34
PKD1L3-201ENST00000620267 HMGXB3Q12766 1538 aa12.91□□□□□ -0.34
PKD1L3-201ENST00000620267 MRC2Q9UBG0 1479 aa12.91□□□□□ -0.34
PKD1L3-201ENST00000620267 CSB-PGBD3P0DP91 1061 aa12.91□□□□□ -0.34
PKD1L3-201ENST00000620267 HDAC5Q9UQL6 1122 aa12.91□□□□□ -0.34
PKD1L3-201ENST00000620267 PAK3O75914 559 aaPredicted RBP12.91□□□□□ -0.34
PKD1L3-201ENST00000620267 GOLGA2Q08379 1002 aa12.91□□□□□ -0.34
PKD1L3-201ENST00000620267 CUX1P39880 1505 aa12.9□□□□□ -0.34
PKD1L3-201ENST00000620267 MYOM3Q5VTT5 1437 aa12.9□□□□□ -0.34
PKD1L3-201ENST00000620267 FRAT1Q92837 279 aaPredicted RBP12.9□□□□□ -0.34
PKD1L3-201ENST00000620267 IFT140Q96RY7 1462 aa12.9□□□□□ -0.35
PKD1L3-201ENST00000620267 CFTRP13569 1480 aa12.89□□□□□ -0.35
PKD1L3-201ENST00000620267 PPP4R2Q9NY27 417 aa12.88□□□□□ -0.35
PKD1L3-201ENST00000620267 IRX6P78412 446 aaPredicted RBP12.88□□□□□ -0.35
PKD1L3-201ENST00000620267 SOX12O15370 315 aa12.88□□□□□ -0.35
PKD1L3-201ENST00000620267 RAD54L2Q9Y4B4 1467 aa12.87□□□□□ -0.35
PKD1L3-201ENST00000620267 LMOD3Q0VAK6 560 aa12.87□□□□□ -0.35
PKD1L3-201ENST00000620267 NGDNQ8NEJ9 315 aaKnown RBP12.87□□□□□ -0.35
PKD1L3-201ENST00000620267 ZRSR1Q15695 479 aaKnown RBP12.87□□□□□ -0.35
PKD1L3-201ENST00000620267 PHLDB1Q86UU1 1377 aa12.87□□□□□ -0.35
PKD1L3-201ENST00000620267 FOXD1Q16676 465 aa12.86□□□□□ -0.35
PKD1L3-201ENST00000620267 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.86□□□□□ -0.35
PKD1L3-201ENST00000620267 U2AF1L5P0DN76 240 aaPredicted RBP12.85□□□□□ -0.35
PKD1L3-201ENST00000620267 U2AF1Q01081 240 aaKnown RBP eCLIP12.85□□□□□ -0.35
PKD1L3-201ENST00000620267 SUPT16HQ9Y5B9 1047 aaKnown RBP12.84□□□□□ -0.35
PKD1L3-201ENST00000620267 L3MBTL2Q969R5 705 aa12.83□□□□□ -0.35
PKD1L3-201ENST00000620267 FAM69CQ0P6D2 419 aa12.83□□□□□ -0.36
PKD1L3-201ENST00000620267 AQRO60306 1485 aaKnown RBP eCLIP12.82□□□□□ -0.36
PKD1L3-201ENST00000620267 SYNJ2O15056 1496 aa12.82□□□□□ -0.36
PKD1L3-201ENST00000620267 TMX4Q9H1E5 349 aaPredicted RBP12.81□□□□□ -0.36
PKD1L3-201ENST00000620267 MCCP23508 829 aa12.81□□□□□ -0.36
PKD1L3-201ENST00000620267 KCNJ4P48050 445 aa12.81□□□□□ -0.36
PKD1L3-201ENST00000620267 ERICH3Q5RHP9 1530 aa12.81□□□□□ -0.36
PKD1L3-201ENST00000620267 EVC2Q86UK5 1308 aa12.81□□□□□ -0.36
PKD1L3-201ENST00000620267 FGD1P98174 961 aa12.81□□□□□ -0.36
PKD1L3-201ENST00000620267 STK31Q9BXU1 1019 aa12.81□□□□□ -0.36
PKD1L3-201ENST00000620267 CC2D2AQ9P2K1 1620 aa12.81□□□□□ -0.36
PKD1L3-201ENST00000620267 ERICH6BQ5W0A0 696 aa12.8□□□□□ -0.36
PKD1L3-201ENST00000620267 AMPHP49418 695 aa12.79□□□□□ -0.36
PKD1L3-201ENST00000620267 NLRP13Q86W25 1043 aa12.79□□□□□ -0.36
PKD1L3-201ENST00000620267 CASKIN1Q8WXD9 1431 aa12.79□□□□□ -0.36
PKD1L3-201ENST00000620267 RUSC2Q8N2Y8 1516 aa12.79□□□□□ -0.36
PKD1L3-201ENST00000620267 FYCO1Q9BQS8 1478 aa12.79□□□□□ -0.36
PKD1L3-201ENST00000620267 EFCAB5A4FU69 1503 aa12.78□□□□□ -0.36
PKD1L3-201ENST00000620267 CCDC9Q9Y3X0 531 aaKnown RBP12.78□□□□□ -0.36
PKD1L3-201ENST00000620267 PLEKHH2Q8IVE3 1493 aa12.78□□□□□ -0.36
PKD1L3-201ENST00000620267 PDE3BQ13370 1112 aa12.77□□□□□ -0.37
PKD1L3-201ENST00000620267 KIF15Q9NS87 1388 aa12.77□□□□□ -0.37
PKD1L3-201ENST00000620267 FGD6Q6ZV73 1430 aa12.76□□□□□ -0.37
PKD1L3-201ENST00000620267 TRAK1Q9UPV9 953 aa12.75□□□□□ -0.37
PKD1L3-201ENST00000620267 CGNL1Q0VF96 1302 aa12.75□□□□□ -0.37
PKD1L3-201ENST00000620267 KIF21BO75037 1637 aa12.75□□□□□ -0.37
PKD1L3-201ENST00000620267 PRG4Q92954 1404 aaPredicted RBP12.75□□□□□ -0.37
PKD1L3-201ENST00000620267 COG3Q96JB2 828 aa12.74□□□□□ -0.37
PKD1L3-201ENST00000620267 PRDM2Q13029 1718 aa12.74□□□□□ -0.37
PKD1L3-201ENST00000620267 RGS3P49796 1198 aa12.74□□□□□ -0.37
PKD1L3-201ENST00000620267 TOPBP1Q92547 1522 aa12.74□□□□□ -0.37
PKD1L3-201ENST00000620267 HMMRO75330 724 aa12.74□□□□□ -0.37
PKD1L3-201ENST00000620267 RWDD1Q9H446 243 aaPredicted RBP12.74□□□□□ -0.37
PKD1L3-201ENST00000620267 NGEFQ8N5V2 710 aa12.72□□□□□ -0.37
PKD1L3-201ENST00000620267 DNMBPQ6XZF7 1577 aa12.72□□□□□ -0.37
PKD1L3-201ENST00000620267 ARHGAP5Q13017 1502 aa12.71□□□□□ -0.37
PKD1L3-201ENST00000620267 GPATCH3Q96I76 525 aa12.71□□□□□ -0.37
PKD1L3-201ENST00000620267 HSP90AB1P08238 724 aaKnown RBP12.71□□□□□ -0.37
PKD1L3-201ENST00000620267 NUTM2DQ5VT03 806 aaPredicted RBP12.71□□□□□ -0.38
PKD1L3-201ENST00000620267 DHX57Q6P158 1386 aaKnown RBP12.71□□□□□ -0.38
PKD1L3-201ENST00000620267 KIAA1211Q6ZU35 1233 aa12.71□□□□□ -0.38
PKD1L3-201ENST00000620267 LRRC9Q6ZRR7 1453 aa12.7□□□□□ -0.38
PKD1L3-201ENST00000620267 LAMC3Q9Y6N6 1575 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms