RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 PDS5BQ9NTI5 1447 aa16.22■□□□□ 0.19
SPCS1-206ENST00000619898 DDRGK1Q96HY6 314 aa16.22■□□□□ 0.19
SPCS1-206ENST00000619898 CCDC184Q52MB2 194 aa16.22■□□□□ 0.19
SPCS1-206ENST00000619898 KIF7Q2M1P5 1343 aa16.21■□□□□ 0.19
SPCS1-206ENST00000619898 RCAN3Q9UKA8 241 aa16.21■□□□□ 0.19
SPCS1-206ENST00000619898 STAG3Q9UJ98 1225 aa16.21■□□□□ 0.18
SPCS1-206ENST00000619898 NUP155O75694 1391 aa16.2■□□□□ 0.18
SPCS1-206ENST00000619898 KNSTRNQ9Y448 316 aa16.19■□□□□ 0.18
SPCS1-206ENST00000619898 MAP3K1Q13233 1512 aa16.19■□□□□ 0.18
SPCS1-206ENST00000619898 PPM1GO15355 546 aaPredicted RBP16.19■□□□□ 0.18
SPCS1-206ENST00000619898 IPO9Q96P70 1041 aaKnown RBP16.19■□□□□ 0.18
SPCS1-206ENST00000619898 PCF11O94913 1555 aaKnown RBP16.18■□□□□ 0.18
SPCS1-206ENST00000619898 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.18■□□□□ 0.186e-7■■■■□ 24.4
SPCS1-206ENST00000619898 GAPVD1Q14C86 1478 aa16.17■□□□□ 0.18
SPCS1-206ENST00000619898 ZNF644Q9H582 1327 aaPredicted RBP16.17■□□□□ 0.18
SPCS1-206ENST00000619898 EIF5BO60841 1220 aaKnown RBP16.17■□□□□ 0.18
SPCS1-206ENST00000619898 RALBP1Q15311 655 aa16.17■□□□□ 0.18
SPCS1-206ENST00000619898 USP47Q96K76 1375 aa16.16■□□□□ 0.18
SPCS1-206ENST00000619898 ANKRD30AQ9BXX3 1397 aa16.16■□□□□ 0.18
SPCS1-206ENST00000619898 RTN4Q9NQC3 1192 aaKnown RBP16.16■□□□□ 0.18
SPCS1-206ENST00000619898 EFCAB5A4FU69 1503 aa16.16■□□□□ 0.18
SPCS1-206ENST00000619898 NAIPQ13075 1403 aa16.16■□□□□ 0.18
SPCS1-206ENST00000619898 ST20-MTHFSA0A0A6YYL1 179 aa16.15■□□□□ 0.18
SPCS1-206ENST00000619898 KTN1Q86UP2 1357 aaKnown RBP16.15■□□□□ 0.18
SPCS1-206ENST00000619898 RGS3P49796 1198 aa16.15■□□□□ 0.18
SPCS1-206ENST00000619898 UPF2Q9HAU5 1272 aaKnown RBP16.15■□□□□ 0.18
SPCS1-206ENST00000619898 NBPF8Q3BBV2 869 aa16.14■□□□□ 0.17
SPCS1-206ENST00000619898 ROCK2O75116 1388 aaKnown RBP16.14■□□□□ 0.17
SPCS1-206ENST00000619898 TCERG1O14776 1098 aaKnown RBP16.14■□□□□ 0.17
SPCS1-206ENST00000619898 TMF1P82094 1093 aa16.12■□□□□ 0.17
SPCS1-206ENST00000619898 ERCC6Q03468 1493 aa16.12■□□□□ 0.17
SPCS1-206ENST00000619898 SLC24A1O60721 1099 aa16.11■□□□□ 0.17
SPCS1-206ENST00000619898 MSH5O43196 834 aa16.11■□□□□ 0.17
SPCS1-206ENST00000619898 NLRP13Q86W25 1043 aa16.11■□□□□ 0.17
SPCS1-206ENST00000619898 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
SPCS1-206ENST00000619898 KIF15Q9NS87 1388 aa16.1■□□□□ 0.17
SPCS1-206ENST00000619898 EXOC6Q8TAG9 804 aa16.09■□□□□ 0.17
SPCS1-206ENST00000619898 MYBBP1AQ9BQG0 1328 aaKnown RBP16.09■□□□□ 0.17
SPCS1-206ENST00000619898 CDCA8Q53HL2 280 aa16.08■□□□□ 0.17
SPCS1-206ENST00000619898 ARXQ96QS3 562 aa16.08■□□□□ 0.16
SPCS1-206ENST00000619898 C11orf95C9JLR9 678 aaPredicted RBP16.08■□□□□ 0.16
SPCS1-206ENST00000619898 TOPBP1Q92547 1522 aa16.07■□□□□ 0.16
SPCS1-206ENST00000619898 HNRNPMP52272 730 aaKnown RBP eCLIP16.06■□□□□ 0.16
SPCS1-206ENST00000619898 NESP48681 1621 aa16.06■□□□□ 0.16
SPCS1-206ENST00000619898 RRP1P56182 461 aaKnown RBP16.06■□□□□ 0.16
SPCS1-206ENST00000619898 PDE3BQ13370 1112 aa16.05■□□□□ 0.16
SPCS1-206ENST00000619898 SENP3Q9H4L4 574 aaPredicted RBP16.05■□□□□ 0.16
SPCS1-206ENST00000619898 NEUROD2Q15784 382 aa16.04■□□□□ 0.16
SPCS1-206ENST00000619898 EHBP1L1Q8N3D4 1523 aa16.04■□□□□ 0.16
SPCS1-206ENST00000619898 AKNAQ7Z591 1439 aa16.04■□□□□ 0.16
SPCS1-206ENST00000619898 AQRO60306 1485 aaKnown RBP eCLIP16.04■□□□□ 0.16
SPCS1-206ENST00000619898 PLIN1O60240 522 aa16.03■□□□□ 0.16
SPCS1-206ENST00000619898 PDE4AP27815 886 aa16.03■□□□□ 0.16
SPCS1-206ENST00000619898 CARMIL2Q6F5E8 1435 aa16.02■□□□□ 0.16
SPCS1-206ENST00000619898 BECN1Q14457 450 aa16.01■□□□□ 0.15
SPCS1-206ENST00000619898 PTPRKQ15262 1439 aa16.01■□□□□ 0.15
SPCS1-206ENST00000619898 ABCA10Q8WWZ4 1543 aa16■□□□□ 0.15
SPCS1-206ENST00000619898 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
SPCS1-206ENST00000619898 FRAT1Q92837 279 aaPredicted RBP15.99■□□□□ 0.15
SPCS1-206ENST00000619898 SUPT6HQ7KZ85 1726 aaKnown RBP15.99■□□□□ 0.15
SPCS1-206ENST00000619898 DNMBPQ6XZF7 1577 aa15.98■□□□□ 0.15
SPCS1-206ENST00000619898 MIA2Q96PC5 1412 aa15.98■□□□□ 0.15
SPCS1-206ENST00000619898 PTPN23Q9H3S7 1636 aa15.97■□□□□ 0.15
SPCS1-206ENST00000619898 TNNT2P45379 298 aaPredicted RBP15.97■□□□□ 0.15
SPCS1-206ENST00000619898 JPH4Q96JJ6 628 aa15.97■□□□□ 0.15
SPCS1-206ENST00000619898 PANK3Q9H999 370 aa15.97■□□□□ 0.15
SPCS1-206ENST00000619898 HSP90AA1P07900 732 aaKnown RBP15.97■□□□□ 0.15
SPCS1-206ENST00000619898 ARID4BQ4LE39 1312 aaPredicted RBP15.97■□□□□ 0.15
SPCS1-206ENST00000619898 PNISRQ8TF01 805 aaKnown RBP15.96■□□□□ 0.14
SPCS1-206ENST00000619898 CRBNQ96SW2 442 aa15.95■□□□□ 0.14
SPCS1-206ENST00000619898 SMG6Q86US8 1419 aaKnown RBP15.93■□□□□ 0.14
SPCS1-206ENST00000619898 ANKRD50Q9ULJ7 1429 aa15.93■□□□□ 0.14
SPCS1-206ENST00000619898 CCDC144AA2RUR9 1427 aa15.93■□□□□ 0.14
SPCS1-206ENST00000619898 GOLGA2Q08379 1002 aa15.93■□□□□ 0.14
SPCS1-206ENST00000619898 ANKRD30BQ9BXX2 1392 aa15.92■□□□□ 0.14
SPCS1-206ENST00000619898 NCOA1Q15788 1441 aa15.92■□□□□ 0.14
SPCS1-206ENST00000619898 CDK13Q14004 1512 aaKnown RBP15.92■□□□□ 0.14
SPCS1-206ENST00000619898 SLC4A3P48751 1232 aa15.91■□□□□ 0.14
SPCS1-206ENST00000619898 DAPK1P53355 1430 aa15.91■□□□□ 0.14
SPCS1-206ENST00000619898 CDCA7LQ96GN5 454 aa15.91■□□□□ 0.14
SPCS1-206ENST00000619898 PRDM2Q13029 1718 aa15.9■□□□□ 0.14
SPCS1-206ENST00000619898 BRD4O60885 1362 aaPredicted RBP15.9■□□□□ 0.14
SPCS1-206ENST00000619898 CCDC146Q8IYE0 955 aa15.9■□□□□ 0.14
SPCS1-206ENST00000619898 EPRSP07814 1512 aaKnown RBP15.9■□□□□ 0.14
SPCS1-206ENST00000619898 CFAP53Q96M91 514 aa15.9■□□□□ 0.14
SPCS1-206ENST00000619898 MS4A1P11836 297 aa15.9■□□□□ 0.14
SPCS1-206ENST00000619898 CC2D2AQ9P2K1 1620 aa15.89■□□□□ 0.13
SPCS1-206ENST00000619898 KIAA1107Q9UPP5 1409 aa15.88■□□□□ 0.13
SPCS1-206ENST00000619898 USP35Q9P2H5 1018 aa15.88■□□□□ 0.13
SPCS1-206ENST00000619898 CUL7Q14999 1698 aa15.88■□□□□ 0.13
SPCS1-206ENST00000619898 FTSJ3Q8IY81 847 aaKnown RBP15.88■□□□□ 0.13
SPCS1-206ENST00000619898 HECW1Q76N89 1606 aa15.88■□□□□ 0.13
SPCS1-206ENST00000619898 RSPH4AQ5TD94 716 aa15.87■□□□□ 0.13
SPCS1-206ENST00000619898 PRG4Q92954 1404 aaPredicted RBP15.85■□□□□ 0.13
SPCS1-206ENST00000619898 ROCK1Q13464 1354 aa15.85■□□□□ 0.13
SPCS1-206ENST00000619898 CFAP43Q8NDM7 1665 aa15.85■□□□□ 0.13
SPCS1-206ENST00000619898 CENPQQ7L2Z9 268 aaPredicted RBP15.85■□□□□ 0.13
SPCS1-206ENST00000619898 RPRD2Q5VT52 1461 aaKnown RBP15.83■□□□□ 0.13
SPCS1-206ENST00000619898 MORC1Q86VD1 984 aa15.83■□□□□ 0.12
SPCS1-206ENST00000619898 SLKQ9H2G2 1235 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms