RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 KIAA0556O60303 1618 aa10.15□□□□□ -0.78
SSX4B-202ENST00000619890 DISP1Q96F81 1524 aa10.15□□□□□ -0.78
SSX4B-202ENST00000619890 CFAP43Q8NDM7 1665 aa10.13□□□□□ -0.79
SSX4B-202ENST00000619890 YEATS2Q9ULM3 1422 aa10.13□□□□□ -0.79
SSX4B-202ENST00000619890 PHLDB1Q86UU1 1377 aa10.13□□□□□ -0.79
SSX4B-202ENST00000619890 GOLGA3Q08378 1498 aa10.12□□□□□ -0.79
SSX4B-202ENST00000619890 SLC4A1APQ9BWU0 796 aaKnown RBP10.1□□□□□ -0.79
SSX4B-202ENST00000619890 RIMS1Q86UR5 1692 aaKnown RBP10.09□□□□□ -0.79
SSX4B-202ENST00000619890 CSRNP3Q8WYN3 585 aa10.08□□□□□ -0.8
SSX4B-202ENST00000619890 SAMD9Q5K651 1589 aa10.08□□□□□ -0.8
SSX4B-202ENST00000619890 POTEHQ6S545 545 aa10.07□□□□□ -0.8
SSX4B-202ENST00000619890 EFCAB5A4FU69 1503 aa10.04□□□□□ -0.8
SSX4B-202ENST00000619890 CEBPAP49715 358 aaPredicted RBP10.04□□□□□ -0.8
SSX4B-202ENST00000619890 MLECQ14165 292 aa10.04□□□□□ -0.8
SSX4B-202ENST00000619890 FOXD4L1Q9NU39 408 aa10.04□□□□□ -0.8
SSX4B-202ENST00000619890 PTPRTO14522 1441 aa10.04□□□□□ -0.8
SSX4B-202ENST00000619890 IQSEC2Q5JU85 1478 aa10.04□□□□□ -0.8
SSX4B-202ENST00000619890 LTBP4Q8N2S1 1624 aa10.04□□□□□ -0.8
SSX4B-202ENST00000619890 STRCQ7RTU9 1775 aa10.03□□□□□ -0.8
SSX4B-202ENST00000619890 POGZQ7Z3K3 1410 aa10.03□□□□□ -0.8
SSX4B-202ENST00000619890 UBAP1LF5GYI3 381 aa10.02□□□□□ -0.81
SSX4B-202ENST00000619890 RBM42Q9BTD8 480 aaKnown RBP10.02□□□□□ -0.81
SSX4B-202ENST00000619890 NEO1Q92859 1461 aa10.02□□□□□ -0.81
SSX4B-202ENST00000619890 ABCA8O94911 1581 aa10.01□□□□□ -0.81
SSX4B-202ENST00000619890 FRMPD1Q5SYB0 1578 aa10.01□□□□□ -0.81
SSX4B-202ENST00000619890 FANCAO15360 1455 aa9.98□□□□□ -0.81
SSX4B-202ENST00000619890 ARID3CA6NKF2 412 aa9.98□□□□□ -0.81
SSX4B-202ENST00000619890 POLA2Q14181 598 aa9.98□□□□□ -0.81
SSX4B-202ENST00000619890 AKNAQ7Z591 1439 aa9.98□□□□□ -0.81
SSX4B-202ENST00000619890 RAPGEF6Q8TEU7 1601 aa9.97□□□□□ -0.81
SSX4B-202ENST00000619890 HSPA1LP34931 641 aa9.97□□□□□ -0.81
SSX4B-202ENST00000619890 ARHGEF40Q8TER5 1519 aa9.97□□□□□ -0.81
SSX4B-202ENST00000619890 TTC37Q6PGP7 1564 aa9.97□□□□□ -0.81
SSX4B-202ENST00000619890 ABCA9Q8IUA7 1624 aa9.96□□□□□ -0.81
SSX4B-202ENST00000619890 FAM9AQ8IZU1 332 aaPredicted RBP9.96□□□□□ -0.82
SSX4B-202ENST00000619890 FHOD3Q2V2M9 1422 aa9.96□□□□□ -0.82
SSX4B-202ENST00000619890 UHRF1BP1Q6BDS2 1440 aa9.96□□□□□ -0.82
SSX4B-202ENST00000619890 DENND4BO75064 1496 aaPredicted RBP9.96□□□□□ -0.82
SSX4B-202ENST00000619890 ATP10BO94823 1461 aa9.96□□□□□ -0.82
SSX4B-202ENST00000619890 PREX1Q8TCU6 1659 aa9.96□□□□□ -0.82
SSX4B-202ENST00000619890 MED1Q15648 1581 aaPredicted RBP9.95□□□□□ -0.82
SSX4B-202ENST00000619890 SIGLEC1Q9BZZ2 1709 aa9.94□□□□□ -0.82
SSX4B-202ENST00000619890 ZNF335Q9H4Z2 1342 aaPredicted RBP9.92□□□□□ -0.82
SSX4B-202ENST00000619890 HECW1Q76N89 1606 aa9.91□□□□□ -0.82
SSX4B-202ENST00000619890 ARHGEF12Q9NZN5 1544 aa9.91□□□□□ -0.82
SSX4B-202ENST00000619890 FER1L4A9Z1Z3 1794 aa9.9□□□□□ -0.82
SSX4B-202ENST00000619890 MAGI2Q86UL8 1455 aa9.9□□□□□ -0.83
SSX4B-202ENST00000619890 SETD1BQ9UPS6 1966 aaKnown RBP9.9□□□□□ -0.83
SSX4B-202ENST00000619890 FMN1Q68DA7 1419 aa9.9□□□□□ -0.83
SSX4B-202ENST00000619890 ZFYVE16Q7Z3T8 1539 aa9.89□□□□□ -0.83
SSX4B-202ENST00000619890 ZBTB12Q9Y330 459 aaPredicted RBP9.89□□□□□ -0.83
SSX4B-202ENST00000619890 RICTORQ6R327 1708 aa9.89□□□□□ -0.83
SSX4B-202ENST00000619890 NUP153P49790 1475 aaKnown RBP9.89□□□□□ -0.83
SSX4B-202ENST00000619890 ARHGAP35Q9NRY4 1499 aa9.89□□□□□ -0.83
SSX4B-202ENST00000619890 UBTFP17480 764 aaKnown RBP9.88□□□□□ -0.83
SSX4B-202ENST00000619890 PIP4K2BP78356 416 aa9.88□□□□□ -0.83
SSX4B-202ENST00000619890 NCOA1Q15788 1441 aa9.88□□□□□ -0.83
SSX4B-202ENST00000619890 ZMYM4Q5VZL5 1548 aa9.87□□□□□ -0.83
SSX4B-202ENST00000619890 ATF5Q9Y2D1 282 aaPredicted RBP9.87□□□□□ -0.83
SSX4B-202ENST00000619890 NCKAP5LQ9HCH0 1330 aa9.86□□□□□ -0.83
SSX4B-202ENST00000619890 ATP10AO60312 1499 aa9.86□□□□□ -0.83
SSX4B-202ENST00000619890 P3H3Q8IVL6 736 aa9.86□□□□□ -0.83
SSX4B-202ENST00000619890 RGS17Q9UGC6 210 aaPredicted RBP9.86□□□□□ -0.83
SSX4B-202ENST00000619890 TOM1O60784 492 aa9.85□□□□□ -0.83
SSX4B-202ENST00000619890 TRAPPC8Q9Y2L5 1435 aa9.84□□□□□ -0.83
SSX4B-202ENST00000619890 C9orf84Q5VXU9 1444 aa9.82□□□□□ -0.84
SSX4B-202ENST00000619890 SRCAPQ6ZRS2 3230 aa9.82□□□□□ -0.84
SSX4B-202ENST00000619890 RANGAP1P46060 587 aaPredicted RBP9.82□□□□□ -0.84
SSX4B-202ENST00000619890 CCDC18Q5T9S5 1454 aa9.82□□□□□ -0.84
SSX4B-202ENST00000619890 CFAP74Q9C0B2 1584 aa9.82□□□□□ -0.84
SSX4B-202ENST00000619890 SCAPERQ9BY12 1400 aa9.82□□□□□ -0.84
SSX4B-202ENST00000619890 FYCO1Q9BQS8 1478 aa9.81□□□□□ -0.84
SSX4B-202ENST00000619890 PLEKHD1A6NEE1 506 aa9.81□□□□□ -0.84
SSX4B-202ENST00000619890 CDK13Q14004 1512 aaKnown RBP9.81□□□□□ -0.84
SSX4B-202ENST00000619890 CLIP1P30622 1438 aa9.81□□□□□ -0.84
SSX4B-202ENST00000619890 LRRIQ1Q96JM4 1722 aa9.8□□□□□ -0.84
SSX4B-202ENST00000619890 ZBTB22O15209 634 aa9.8□□□□□ -0.84
SSX4B-202ENST00000619890 PKD2Q13563 968 aa9.8□□□□□ -0.84
SSX4B-202ENST00000619890 KIF14Q15058 1648 aa9.79□□□□□ -0.84
SSX4B-202ENST00000619890 CAMSAP1Q5T5Y3 1602 aa9.79□□□□□ -0.84
SSX4B-202ENST00000619890 ESF1Q9H501 851 aaKnown RBP9.79□□□□□ -0.84
SSX4B-202ENST00000619890 CASKIN1Q8WXD9 1431 aa9.79□□□□□ -0.84
SSX4B-202ENST00000619890 ATXN8OSP0DMR3 200 aa9.78□□□□□ -0.84
SSX4B-202ENST00000619890 MYO5CQ9NQX4 1742 aa9.77□□□□□ -0.85
SSX4B-202ENST00000619890 POTEAQ6S8J7 498 aa9.77□□□□□ -0.85
SSX4B-202ENST00000619890 CHRDL2Q6WN34 429 aa9.77□□□□□ -0.85
SSX4B-202ENST00000619890 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.77□□□□□ -0.85
SSX4B-202ENST00000619890 CEP162Q5TB80 1403 aa9.76□□□□□ -0.85
SSX4B-202ENST00000619890 AKT1S1Q96B36 256 aa9.76□□□□□ -0.85
SSX4B-202ENST00000619890 C3P01024 1663 aa9.75□□□□□ -0.85
SSX4B-202ENST00000619890 AFAP1Q8N556 730 aa9.75□□□□□ -0.85
SSX4B-202ENST00000619890 TROQ12816 1431 aaPredicted RBP9.74□□□□□ -0.85
SSX4B-202ENST00000619890 CDK11AQ9UQ88 783 aaPredicted RBP9.74□□□□□ -0.85
SSX4B-202ENST00000619890 PLCH2O75038 1416 aa9.73□□□□□ -0.85
SSX4B-202ENST00000619890 TCOF1Q13428 1488 aaKnown RBP9.73□□□□□ -0.85
SSX4B-202ENST00000619890 EFCAB2Q5VUJ9 269 aa9.73□□□□□ -0.85
SSX4B-202ENST00000619890 NPATQ14207 1427 aa9.72□□□□□ -0.85
SSX4B-202ENST00000619890 PTPRKQ15262 1439 aa9.72□□□□□ -0.85
SSX4B-202ENST00000619890 PLA2R1Q13018 1463 aa9.72□□□□□ -0.85
SSX4B-202ENST00000619890 PREX2Q70Z35 1606 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms