RNA–Protein interactions for RNA: ENST00000619121.4

CSMD2-210, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD2, Length 13,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-210ENST00000619121 GOLGA6L1Q8N7Z2 621 aa9.07□□□□□ -0.96
CSMD2-210ENST00000619121 P3H3Q8IVL6 736 aa9.07□□□□□ -0.96
CSMD2-210ENST00000619121 ANKRD30AQ9BXX3 1397 aa9.07□□□□□ -0.96
CSMD2-210ENST00000619121 CUX1P39880 1505 aa9.07□□□□□ -0.96
CSMD2-210ENST00000619121 PRDM2Q13029 1718 aa9.07□□□□□ -0.96
CSMD2-210ENST00000619121 SRPK2P78362 688 aaKnown RBP9.07□□□□□ -0.96
CSMD2-210ENST00000619121 TERF2IPQ9NYB0 399 aa9.07□□□□□ -0.96
CSMD2-210ENST00000619121 ROCK1Q13464 1354 aa9.06□□□□□ -0.96
CSMD2-210ENST00000619121 HMMRO75330 724 aa9.06□□□□□ -0.96
CSMD2-210ENST00000619121 AAMPQ13685 434 aa9.06□□□□□ -0.96
CSMD2-210ENST00000619121 CARD11Q9BXL7 1154 aa9.06□□□□□ -0.96
CSMD2-210ENST00000619121 PTMAP06454 111 aaKnown RBP9.05□□□□□ -0.96
CSMD2-210ENST00000619121 TOP2AP11388 1531 aaKnown RBP9.05□□□□□ -0.96
CSMD2-210ENST00000619121 RALBP1Q15311 655 aa9.05□□□□□ -0.96
CSMD2-210ENST00000619121 GNL2Q13823 731 aaKnown RBP9.04□□□□□ -0.96
CSMD2-210ENST00000619121 CEP89Q96ST8 783 aa9.04□□□□□ -0.96
CSMD2-210ENST00000619121 A0A0G2JS52 829 aa9.04□□□□□ -0.96
CSMD2-210ENST00000619121 EFCAB2Q5VUJ9 269 aa9.04□□□□□ -0.96
CSMD2-210ENST00000619121 TPM2P07951 284 aa9.03□□□□□ -0.96
CSMD2-210ENST00000619121 DNTTIP2Q5QJE6 756 aaKnown RBP9.03□□□□□ -0.96
CSMD2-210ENST00000619121 G3V3G9 751 aa9.03□□□□□ -0.96
CSMD2-210ENST00000619121 DCAF8Q5TAQ9 597 aa9.03□□□□□ -0.96
CSMD2-210ENST00000619121 DHX8Q14562 1220 aaKnown RBP9.03□□□□□ -0.96
CSMD2-210ENST00000619121 RDXP35241 583 aaKnown RBP9.02□□□□□ -0.97
CSMD2-210ENST00000619121 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.02□□□□□ -0.97
CSMD2-210ENST00000619121 KRI1Q8N9T8 703 aaKnown RBP9.02□□□□□ -0.97
CSMD2-210ENST00000619121 HOOK1Q9UJC3 728 aaKnown RBP9.02□□□□□ -0.97
CSMD2-210ENST00000619121 PDIA4P13667 645 aaKnown RBP9.01□□□□□ -0.97
CSMD2-210ENST00000619121 HSCBQ8IWL3 235 aa9.01□□□□□ -0.97
CSMD2-210ENST00000619121 ATP6V1DQ9Y5K8 247 aa9.01□□□□□ -0.97
CSMD2-210ENST00000619121 EIF4G1Q04637 1599 aaKnown RBP9.01□□□□□ -0.97
CSMD2-210ENST00000619121 PMFBP1Q8TBY8 1022 aa9.01□□□□□ -0.97
CSMD2-210ENST00000619121 GBP4Q96PP9 640 aa9□□□□□ -0.97
CSMD2-210ENST00000619121 CCDC70Q6NSX1 233 aa9□□□□□ -0.97
CSMD2-210ENST00000619121 NOL10Q9BSC4 688 aaKnown RBP9□□□□□ -0.97
CSMD2-210ENST00000619121 FAM9BQ8IZU0 186 aa9□□□□□ -0.97
CSMD2-210ENST00000619121 CARMIL1Q5VZK9 1371 aa8.99□□□□□ -0.97
CSMD2-210ENST00000619121 MSNP26038 577 aaKnown RBP8.99□□□□□ -0.97
CSMD2-210ENST00000619121 SMARCA4P51532 1647 aa8.99□□□□□ -0.97
CSMD2-210ENST00000619121 DHX37Q8IY37 1157 aaKnown RBP8.99□□□□□ -0.97
CSMD2-210ENST00000619121 IL27Q8NEV9 243 aa8.98□□□□□ -0.97
CSMD2-210ENST00000619121 NAP1L2Q9ULW6 460 aaPredicted RBP8.98□□□□□ -0.97
CSMD2-210ENST00000619121 PLEKHH2Q8IVE3 1493 aa8.98□□□□□ -0.97
CSMD2-210ENST00000619121 TSR1Q2NL82 804 aaKnown RBP8.98□□□□□ -0.97
CSMD2-210ENST00000619121 HMGB3O15347 200 aaKnown RBP8.98□□□□□ -0.97
CSMD2-210ENST00000619121 STK31Q9BXU1 1019 aa8.98□□□□□ -0.97
CSMD2-210ENST00000619121 DNAI2Q9GZS0 605 aa8.98□□□□□ -0.97
CSMD2-210ENST00000619121 TRHP20396 242 aaPredicted RBP8.98□□□□□ -0.97
CSMD2-210ENST00000619121 CPLX2Q6PUV4 134 aaKnown RBP8.98□□□□□ -0.97
CSMD2-210ENST00000619121 KCNH8Q96L42 1107 aa8.98□□□□□ -0.97
CSMD2-210ENST00000619121 KIF21BO75037 1637 aa8.97□□□□□ -0.97
CSMD2-210ENST00000619121 TPM3P06753 285 aa8.97□□□□□ -0.97
CSMD2-210ENST00000619121 HSP90AB1P08238 724 aaKnown RBP8.97□□□□□ -0.97
CSMD2-210ENST00000619121 CCDC47Q96A33 483 aaKnown RBP8.97□□□□□ -0.97
CSMD2-210ENST00000619121 TCEAL9Q9UHQ7 104 aa8.97□□□□□ -0.97
CSMD2-210ENST00000619121 KTN1Q86UP2 1357 aaKnown RBP8.97□□□□□ -0.97
CSMD2-210ENST00000619121 KDM2AQ9Y2K7 1162 aa8.97□□□□□ -0.97
CSMD2-210ENST00000619121 PDE3BQ13370 1112 aa8.97□□□□□ -0.97
CSMD2-210ENST00000619121 CCER2I3L3R5 266 aa8.96□□□□□ -0.97
CSMD2-210ENST00000619121 GTF3C3Q9Y5Q9 886 aa8.96□□□□□ -0.97
CSMD2-210ENST00000619121 MIA2Q96PC5 1412 aa8.96□□□□□ -0.98
CSMD2-210ENST00000619121 NOC3LQ8WTT2 800 aaKnown RBP8.96□□□□□ -0.98
CSMD2-210ENST00000619121 TRIM21P19474 475 aaKnown RBP8.95□□□□□ -0.98
CSMD2-210ENST00000619121 TPM1P09493 284 aa8.95□□□□□ -0.98
CSMD2-210ENST00000619121 E9PSI1 815 aa8.95□□□□□ -0.98
CSMD2-210ENST00000619121 TAF7LQ5H9L4 462 aa8.95□□□□□ -0.98
CSMD2-210ENST00000619121 CUX2O14529 1486 aa8.95□□□□□ -0.98
CSMD2-210ENST00000619121 SOGA1O94964 1423 aa8.94□□□□□ -0.98
CSMD2-210ENST00000619121 WWC2Q6AWC2 1192 aa8.94□□□□□ -0.98
CSMD2-210ENST00000619121 ARXQ96QS3 562 aa8.94□□□□□ -0.98
CSMD2-210ENST00000619121 SUPT6HQ7KZ85 1726 aaKnown RBP8.94□□□□□ -0.98
CSMD2-210ENST00000619121 MYO6Q9UM54 1294 aa8.94□□□□□ -0.98
CSMD2-210ENST00000619121 VGFO15240 615 aaPredicted RBP8.94□□□□□ -0.98
CSMD2-210ENST00000619121 CCDC7Q96M83 1385 aa8.94□□□□□ -0.98
CSMD2-210ENST00000619121 TCERG1O14776 1098 aaKnown RBP8.94□□□□□ -0.98
CSMD2-210ENST00000619121 GPS2Q13227 327 aa8.94□□□□□ -0.98
CSMD2-210ENST00000619121 CUL7Q14999 1698 aa8.94□□□□□ -0.98
CSMD2-210ENST00000619121 ANKRD20A12PQ8NF67 263 aa8.93□□□□□ -0.98
CSMD2-210ENST00000619121 FKBP8Q14318 412 aa8.93□□□□□ -0.98
CSMD2-210ENST00000619121 ST18O60284 1047 aa8.92□□□□□ -0.98
CSMD2-210ENST00000619121 CDR1P51861 262 aa8.92□□□□□ -0.98
CSMD2-210ENST00000619121 RAPGEF2Q9Y4G8 1499 aa8.92□□□□□ -0.98
CSMD2-210ENST00000619121 BCL11AQ9H165 835 aa8.92□□□□□ -0.98
CSMD2-210ENST00000619121 HMGB1P1B2RPK0 211 aaPredicted RBP8.92□□□□□ -0.98
CSMD2-210ENST00000619121 CHIC2Q9UKJ5 165 aa8.92□□□□□ -0.98
CSMD2-210ENST00000619121 RWDD1Q9H446 243 aaPredicted RBP8.91□□□□□ -0.98
CSMD2-210ENST00000619121 DDX10Q13206 875 aaKnown RBP8.91□□□□□ -0.98
CSMD2-210ENST00000619121 PKNOX2Q96KN3 472 aa8.91□□□□□ -0.98
CSMD2-210ENST00000619121 TRIM34Q9BYJ4 488 aa8.91□□□□□ -0.98
CSMD2-210ENST00000619121 MFAP1P55081 439 aaKnown RBP8.91□□□□□ -0.98
CSMD2-210ENST00000619121 GORABQ5T7V8 394 aa8.91□□□□□ -0.98
CSMD2-210ENST00000619121 RUFY2Q8WXA3 655 aa8.91□□□□□ -0.98
CSMD2-210ENST00000619121 AKAP17AQ02040 695 aaKnown RBP8.9□□□□□ -0.98
CSMD2-210ENST00000619121 KIF16BQ96L93 1317 aa8.9□□□□□ -0.98
CSMD2-210ENST00000619121 PRKCSHP14314 528 aaPredicted RBP8.9□□□□□ -0.98
CSMD2-210ENST00000619121 NEXNQ0ZGT2 675 aa8.9□□□□□ -0.98
CSMD2-210ENST00000619121 SYNE3Q6ZMZ3 975 aa8.9□□□□□ -0.98
CSMD2-210ENST00000619121 POGZQ7Z3K3 1410 aa8.9□□□□□ -0.98
CSMD2-210ENST00000619121 RRBP1Q9P2E9 1410 aaKnown RBP8.9□□□□□ -0.98
CSMD2-210ENST00000619121 SETQ01105 290 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms