RNA–Protein interactions for RNA: ENST00000618855.4

TMPRSS4-220, Transcript of transmembrane serine protease 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMPRSS4, Length 3,531 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-220ENST00000618855 TOP2BQ02880 1626 aa12.68□□□□□ -0.38
TMPRSS4-220ENST00000618855 FHAD1B1AJZ9 1412 aa12.68□□□□□ -0.38
TMPRSS4-220ENST00000618855 PDE4AP27815 886 aa12.67□□□□□ -0.38
TMPRSS4-220ENST00000618855 EXOC6Q8TAG9 804 aa12.66□□□□□ -0.38
TMPRSS4-220ENST00000618855 NPM1P06748 294 aaKnown RBP eCLIP12.65□□□□□ -0.38
TMPRSS4-220ENST00000618855 ZNF608Q9ULD9 1512 aaPredicted RBP12.65□□□□□ -0.38
TMPRSS4-220ENST00000618855 HMGXB3Q12766 1538 aa12.65□□□□□ -0.38
TMPRSS4-220ENST00000618855 C11orf95C9JLR9 678 aaPredicted RBP12.64□□□□□ -0.39
TMPRSS4-220ENST00000618855 DDRGK1Q96HY6 314 aa12.64□□□□□ -0.39
TMPRSS4-220ENST00000618855 TCERG1O14776 1098 aaKnown RBP12.63□□□□□ -0.39
TMPRSS4-220ENST00000618855 LRRC9Q6ZRR7 1453 aa12.63□□□□□ -0.39
TMPRSS4-220ENST00000618855 CCDC18Q5T9S5 1454 aa12.63□□□□□ -0.39
TMPRSS4-220ENST00000618855 PLEKHG5O94827 1062 aa12.62□□□□□ -0.39
TMPRSS4-220ENST00000618855 GSE1Q14687 1217 aa12.62□□□□□ -0.39
TMPRSS4-220ENST00000618855 USP35Q9P2H5 1018 aa12.62□□□□□ -0.39
TMPRSS4-220ENST00000618855 URB2Q14146 1524 aaKnown RBP12.62□□□□□ -0.39
TMPRSS4-220ENST00000618855 PKD2Q13563 968 aa12.62□□□□□ -0.39
TMPRSS4-220ENST00000618855 NUTM2DQ5VT03 806 aaPredicted RBP12.61□□□□□ -0.39
TMPRSS4-220ENST00000618855 MPHOSPH9Q99550 1183 aa12.61□□□□□ -0.39
TMPRSS4-220ENST00000618855 CNTLNQ9NXG0 1405 aa12.61□□□□□ -0.39
TMPRSS4-220ENST00000618855 PEG3Q9GZU2 1588 aa12.6□□□□□ -0.39
TMPRSS4-220ENST00000618855 MLECQ14165 292 aa12.6□□□□□ -0.39
TMPRSS4-220ENST00000618855 DCAF11Q8TEB1 546 aa12.6□□□□□ -0.39
TMPRSS4-220ENST00000618855 RCAN3Q9UKA8 241 aa12.6□□□□□ -0.39
TMPRSS4-220ENST00000618855 CCDC7Q96M83 1385 aa12.59□□□□□ -0.39
TMPRSS4-220ENST00000618855 ERICH3Q5RHP9 1530 aa12.59□□□□□ -0.39
TMPRSS4-220ENST00000618855 PLIN1O60240 522 aa12.59□□□□□ -0.39
TMPRSS4-220ENST00000618855 RGS3P49796 1198 aa12.58□□□□□ -0.4
TMPRSS4-220ENST00000618855 SKAP1Q86WV1 359 aa12.58□□□□□ -0.4
TMPRSS4-220ENST00000618855 FMN1Q68DA7 1419 aa12.58□□□□□ -0.4
TMPRSS4-220ENST00000618855 CYB5RLQ6IPT4 315 aa12.58□□□□□ -0.4
TMPRSS4-220ENST00000618855 KIF7Q2M1P5 1343 aa12.58□□□□□ -0.4
TMPRSS4-220ENST00000618855 PKNOX2Q96KN3 472 aa12.57□□□□□ -0.4
TMPRSS4-220ENST00000618855 NFKBIBQ15653 356 aa12.56□□□□□ -0.4
TMPRSS4-220ENST00000618855 GGT6Q6P531 493 aa12.56□□□□□ -0.4
TMPRSS4-220ENST00000618855 FRAT1Q92837 279 aaPredicted RBP12.56□□□□□ -0.4
TMPRSS4-220ENST00000618855 UACAQ9BZF9 1416 aa12.56□□□□□ -0.4
TMPRSS4-220ENST00000618855 RRP1P56182 461 aaKnown RBP12.55□□□□□ -0.4
TMPRSS4-220ENST00000618855 TIAM1Q13009 1591 aa12.54□□□□□ -0.4
TMPRSS4-220ENST00000618855 SAFB2Q14151 953 aaKnown RBP eCLIP12.54□□□□□ -0.4
TMPRSS4-220ENST00000618855 GLIPR1L2Q4G1C9 344 aa12.53□□□□□ -0.4
TMPRSS4-220ENST00000618855 BACH2Q9BYV9 841 aa12.53□□□□□ -0.4
TMPRSS4-220ENST00000618855 CARD11Q9BXL7 1154 aa12.52□□□□□ -0.4
TMPRSS4-220ENST00000618855 NBPF8Q3BBV2 869 aa12.52□□□□□ -0.41
TMPRSS4-220ENST00000618855 NUP155O75694 1391 aa12.51□□□□□ -0.41
TMPRSS4-220ENST00000618855 FGD6Q6ZV73 1430 aa12.51□□□□□ -0.41
TMPRSS4-220ENST00000618855 PRG4Q92954 1404 aaPredicted RBP12.51□□□□□ -0.41
TMPRSS4-220ENST00000618855 SMG6Q86US8 1419 aaKnown RBP12.5□□□□□ -0.41
TMPRSS4-220ENST00000618855 TNNT2P45379 298 aaPredicted RBP12.5□□□□□ -0.41
TMPRSS4-220ENST00000618855 WASHC2CQ9Y4E1 1318 aa12.5□□□□□ -0.41
TMPRSS4-220ENST00000618855 CDK13Q14004 1512 aaKnown RBP12.5□□□□□ -0.41
TMPRSS4-220ENST00000618855 SNAPC4Q5SXM2 1469 aa12.5□□□□□ -0.41
TMPRSS4-220ENST00000618855 NAP1L5Q96NT1 182 aaPredicted RBP12.5□□□□□ -0.41
TMPRSS4-220ENST00000618855 AFAP1Q8N556 730 aa12.49□□□□□ -0.41
TMPRSS4-220ENST00000618855 STAG3Q9UJ98 1225 aa12.48□□□□□ -0.41
TMPRSS4-220ENST00000618855 FRAT2O75474 233 aaPredicted RBP12.48□□□□□ -0.41
TMPRSS4-220ENST00000618855 PTPRGP23470 1445 aa12.48□□□□□ -0.41
TMPRSS4-220ENST00000618855 CRBNQ96SW2 442 aa12.48□□□□□ -0.41
TMPRSS4-220ENST00000618855 SLKQ9H2G2 1235 aaPredicted RBP12.47□□□□□ -0.41
TMPRSS4-220ENST00000618855 MS4A1P11836 297 aa12.47□□□□□ -0.41
TMPRSS4-220ENST00000618855 CC2D1BQ5T0F9 858 aaKnown RBP12.47□□□□□ -0.41
TMPRSS4-220ENST00000618855 CDCA7LQ96GN5 454 aa12.47□□□□□ -0.41
TMPRSS4-220ENST00000618855 CARMIL2Q6F5E8 1435 aa12.46□□□□□ -0.41
TMPRSS4-220ENST00000618855 PNISRQ8TF01 805 aaKnown RBP12.46□□□□□ -0.42
TMPRSS4-220ENST00000618855 CANXP27824 592 aaKnown RBP12.45□□□□□ -0.42
TMPRSS4-220ENST00000618855 PRDM2Q13029 1718 aa12.45□□□□□ -0.42
TMPRSS4-220ENST00000618855 ARID4BQ4LE39 1312 aaPredicted RBP12.45□□□□□ -0.42
TMPRSS4-220ENST00000618855 KIF3BO15066 747 aa12.45□□□□□ -0.42
TMPRSS4-220ENST00000618855 RSPH6AQ9H0K4 717 aa12.45□□□□□ -0.42
TMPRSS4-220ENST00000618855 DNMBPQ6XZF7 1577 aa12.45□□□□□ -0.42
TMPRSS4-220ENST00000618855 PLB1Q6P1J6 1458 aa12.45□□□□□ -0.42
TMPRSS4-220ENST00000618855 NCOA2Q15596 1464 aa12.44□□□□□ -0.42
TMPRSS4-220ENST00000618855 HFM1A2PYH4 1435 aa12.44□□□□□ -0.42
TMPRSS4-220ENST00000618855 MRC2Q9UBG0 1479 aa12.43□□□□□ -0.42
TMPRSS4-220ENST00000618855 ABCA10Q8WWZ4 1543 aa12.43□□□□□ -0.42
TMPRSS4-220ENST00000618855 GRIN2BQ13224 1484 aa12.43□□□□□ -0.42
TMPRSS4-220ENST00000618855 NAIPQ13075 1403 aa12.43□□□□□ -0.42
TMPRSS4-220ENST00000618855 SPRYD3Q8NCJ5 442 aa12.42□□□□□ -0.42
TMPRSS4-220ENST00000618855 VSIG10Q8N0Z9 540 aa12.42□□□□□ -0.42
TMPRSS4-220ENST00000618855 GZF1Q9H116 711 aaPredicted RBP12.42□□□□□ -0.42
TMPRSS4-220ENST00000618855 PTPRKQ15262 1439 aa12.41□□□□□ -0.42
TMPRSS4-220ENST00000618855 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.4□□□□□ -0.42
TMPRSS4-220ENST00000618855 USP47Q96K76 1375 aa12.4□□□□□ -0.42
TMPRSS4-220ENST00000618855 NCOA1Q15788 1441 aa12.4□□□□□ -0.42
TMPRSS4-220ENST00000618855 ST20-MTHFSA0A0A6YYL1 179 aa12.4□□□□□ -0.43
TMPRSS4-220ENST00000618855 TRHP20396 242 aaPredicted RBP12.4□□□□□ -0.43
TMPRSS4-220ENST00000618855 PCF11O94913 1555 aaKnown RBP12.39□□□□□ -0.43
TMPRSS4-220ENST00000618855 STK26Q9P289 416 aa12.39□□□□□ -0.43
TMPRSS4-220ENST00000618855 CASKIN1Q8WXD9 1431 aa12.39□□□□□ -0.43
TMPRSS4-220ENST00000618855 BECN1Q14457 450 aa12.39□□□□□ -0.43
TMPRSS4-220ENST00000618855 WDR43Q15061 677 aaKnown RBP eCLIP12.39□□□□□ -0.43
TMPRSS4-220ENST00000618855 UPF2Q9HAU5 1272 aaKnown RBP12.38□□□□□ -0.43
TMPRSS4-220ENST00000618855 FAM161AQ3B820 660 aa12.38□□□□□ -0.43
TMPRSS4-220ENST00000618855 MYBBP1AQ9BQG0 1328 aaKnown RBP12.38□□□□□ -0.43
TMPRSS4-220ENST00000618855 MYOM3Q5VTT5 1437 aa12.38□□□□□ -0.43
TMPRSS4-220ENST00000618855 NEUROD2Q15784 382 aa12.37□□□□□ -0.43
TMPRSS4-220ENST00000618855 RALBP1Q15311 655 aa12.37□□□□□ -0.43
TMPRSS4-220ENST00000618855 PNNQ9H307 717 aaKnown RBP12.37□□□□□ -0.43
TMPRSS4-220ENST00000618855 ESF1Q9H501 851 aaKnown RBP12.37□□□□□ -0.43
TMPRSS4-220ENST00000618855 NLRP13Q86W25 1043 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms