RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 FER1L4A9Z1Z3 1794 aa18.75■□□□□ 0.59
AP003900.1-202ENST00000616952 KIF27Q86VH2 1401 aa18.74■□□□□ 0.59
AP003900.1-202ENST00000616952 CARMIL1Q5VZK9 1371 aa18.72■□□□□ 0.59
AP003900.1-202ENST00000616952 ABCA9Q8IUA7 1624 aa18.72■□□□□ 0.59
AP003900.1-202ENST00000616952 SIGLEC1Q9BZZ2 1709 aa18.71■□□□□ 0.59
AP003900.1-202ENST00000616952 UBAP1LF5GYI3 381 aa18.7■□□□□ 0.58
AP003900.1-202ENST00000616952 ABCA8O94911 1581 aa18.7■□□□□ 0.58
AP003900.1-202ENST00000616952 UHRF1BP1Q6BDS2 1440 aa18.7■□□□□ 0.58
AP003900.1-202ENST00000616952 AKNAQ7Z591 1439 aa18.69■□□□□ 0.58
AP003900.1-202ENST00000616952 MLECQ14165 292 aa18.64■□□□□ 0.57
AP003900.1-202ENST00000616952 RICTORQ6R327 1708 aa18.63■□□□□ 0.57
AP003900.1-202ENST00000616952 ARHGEF12Q9NZN5 1544 aa18.63■□□□□ 0.57
AP003900.1-202ENST00000616952 DENND4BO75064 1496 aaPredicted RBP18.62■□□□□ 0.57
AP003900.1-202ENST00000616952 ZFYVE16Q7Z3T8 1539 aa18.62■□□□□ 0.57
AP003900.1-202ENST00000616952 ZMYM4Q5VZL5 1548 aa18.61■□□□□ 0.57
AP003900.1-202ENST00000616952 EFCAB5A4FU69 1503 aa18.6■□□□□ 0.57
AP003900.1-202ENST00000616952 FHOD3Q2V2M9 1422 aa18.6■□□□□ 0.57
AP003900.1-202ENST00000616952 CAPN15O75808 1086 aa18.6■□□□□ 0.57
AP003900.1-202ENST00000616952 SPINK5Q9NQ38 1064 aaPredicted RBP18.6■□□□□ 0.57
AP003900.1-202ENST00000616952 CEBPAP49715 358 aaPredicted RBP18.59■□□□□ 0.57
AP003900.1-202ENST00000616952 HSPA1LP34931 641 aa18.58■□□□□ 0.56
AP003900.1-202ENST00000616952 NCOA1Q15788 1441 aa18.55■□□□□ 0.56
AP003900.1-202ENST00000616952 MAGI2Q86UL8 1455 aa18.52■□□□□ 0.56
AP003900.1-202ENST00000616952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.52■□□□□ 0.56
AP003900.1-202ENST00000616952 APLP2Q06481 763 aa18.52■□□□□ 0.56
AP003900.1-202ENST00000616952 HNRNPUL2Q1KMD3 747 aaKnown RBP18.52■□□□□ 0.56
AP003900.1-202ENST00000616952 ARID3CA6NKF2 412 aa18.51■□□□□ 0.55
AP003900.1-202ENST00000616952 ATP10BO94823 1461 aa18.51■□□□□ 0.55
AP003900.1-202ENST00000616952 ZNF335Q9H4Z2 1342 aaPredicted RBP18.5■□□□□ 0.55
AP003900.1-202ENST00000616952 GOLGA3Q08378 1498 aa18.49■□□□□ 0.55
AP003900.1-202ENST00000616952 DSG3P32926 999 aa18.47■□□□□ 0.55
AP003900.1-202ENST00000616952 CFAP74Q9C0B2 1584 aa18.46■□□□□ 0.55
AP003900.1-202ENST00000616952 HECW1Q76N89 1606 aa18.45■□□□□ 0.54
AP003900.1-202ENST00000616952 C9orf84Q5VXU9 1444 aa18.43■□□□□ 0.54
AP003900.1-202ENST00000616952 SETD1BQ9UPS6 1966 aaKnown RBP18.43■□□□□ 0.54
AP003900.1-202ENST00000616952 PIP4K2BP78356 416 aa18.43■□□□□ 0.54
AP003900.1-202ENST00000616952 RAPGEF2Q9Y4G8 1499 aa18.43■□□□□ 0.54
AP003900.1-202ENST00000616952 SAMD1Q6SPF0 538 aaPredicted RBP18.4■□□□□ 0.54
AP003900.1-202ENST00000616952 CAMSAP1Q5T5Y3 1602 aa18.4■□□□□ 0.54
AP003900.1-202ENST00000616952 ATP10AO60312 1499 aa18.39■□□□□ 0.54
AP003900.1-202ENST00000616952 C3P01024 1663 aa18.38■□□□□ 0.53
AP003900.1-202ENST00000616952 SLC4A1APQ9BWU0 796 aaKnown RBP18.37■□□□□ 0.53
AP003900.1-202ENST00000616952 TRAPPC8Q9Y2L5 1435 aa18.36■□□□□ 0.53
AP003900.1-202ENST00000616952 ZNF219Q9P2Y4 722 aaPredicted RBP18.35■□□□□ 0.53
AP003900.1-202ENST00000616952 CTTNBP2Q8WZ74 1663 aa18.34■□□□□ 0.53
AP003900.1-202ENST00000616952 TOM1O60784 492 aa18.34■□□□□ 0.53
AP003900.1-202ENST00000616952 RGS17Q9UGC6 210 aaPredicted RBP18.33■□□□□ 0.52
AP003900.1-202ENST00000616952 NCKAP5LQ9HCH0 1330 aa18.31■□□□□ 0.52
AP003900.1-202ENST00000616952 SRCAPQ6ZRS2 3230 aa18.28■□□□□ 0.52
AP003900.1-202ENST00000616952 MYCNP04198 464 aaPredicted RBP18.28■□□□□ 0.52
AP003900.1-202ENST00000616952 SCAPERQ9BY12 1400 aa18.26■□□□□ 0.51
AP003900.1-202ENST00000616952 PLA2R1Q13018 1463 aa18.26■□□□□ 0.51
AP003900.1-202ENST00000616952 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.25■□□□□ 0.51
AP003900.1-202ENST00000616952 FAM9AQ8IZU1 332 aaPredicted RBP18.25■□□□□ 0.51
AP003900.1-202ENST00000616952 TCOF1Q13428 1488 aaKnown RBP18.25■□□□□ 0.51
AP003900.1-202ENST00000616952 CPS1P31327 1500 aa18.23■□□□□ 0.51
AP003900.1-202ENST00000616952 RAPGEF6Q8TEU7 1601 aa18.23■□□□□ 0.51
AP003900.1-202ENST00000616952 PKD2Q13563 968 aa18.23■□□□□ 0.51
AP003900.1-202ENST00000616952 ALKQ9UM73 1620 aa18.23■□□□□ 0.51
AP003900.1-202ENST00000616952 NPATQ14207 1427 aa18.21■□□□□ 0.51
AP003900.1-202ENST00000616952 PTPRKQ15262 1439 aa18.21■□□□□ 0.51
AP003900.1-202ENST00000616952 SETD1AO15047 1707 aaKnown RBP18.2■□□□□ 0.5
AP003900.1-202ENST00000616952 ESF1Q9H501 851 aaKnown RBP18.19■□□□□ 0.5
AP003900.1-202ENST00000616952 REREQ9P2R6 1566 aa18.19■□□□□ 0.5
AP003900.1-202ENST00000616952 NUP153P49790 1475 aaKnown RBP18.19■□□□□ 0.5
AP003900.1-202ENST00000616952 AGLP35573 1532 aa18.18■□□□□ 0.5
AP003900.1-202ENST00000616952 CNTLNQ9NXG0 1405 aa18.17■□□□□ 0.5
AP003900.1-202ENST00000616952 SUPT5HO00267 1087 aaKnown RBP18.17■□□□□ 0.5
AP003900.1-202ENST00000616952 POTEAQ6S8J7 498 aa18.17■□□□□ 0.5
AP003900.1-202ENST00000616952 ZNF142P52746 1687 aaPredicted RBP18.17■□□□□ 0.5
AP003900.1-202ENST00000616952 DIP2CQ9Y2E4 1556 aa18.17■□□□□ 0.5
AP003900.1-202ENST00000616952 MYO3AQ8NEV4 1616 aa18.14■□□□□ 0.49
AP003900.1-202ENST00000616952 ABCB7O75027 752 aa18.14■□□□□ 0.49
AP003900.1-202ENST00000616952 P3H3Q8IVL6 736 aa18.14■□□□□ 0.49
AP003900.1-202ENST00000616952 ZNF518AQ6AHZ1 1483 aa18.14■□□□□ 0.49
AP003900.1-202ENST00000616952 FOXD4L1Q9NU39 408 aa18.13■□□□□ 0.49
AP003900.1-202ENST00000616952 SHANK2Q9UPX8 1470 aa18.13■□□□□ 0.49
AP003900.1-202ENST00000616952 KDM5CP41229 1560 aa18.13■□□□□ 0.49
AP003900.1-202ENST00000616952 CEP170BQ9Y4F5 1589 aaPredicted RBP18.13■□□□□ 0.49
AP003900.1-202ENST00000616952 PLEKHD1A6NEE1 506 aa18.12■□□□□ 0.49
AP003900.1-202ENST00000616952 PLCH2O75038 1416 aa18.1■□□□□ 0.49
AP003900.1-202ENST00000616952 SUPT6HQ7KZ85 1726 aaKnown RBP18.09■□□□□ 0.49
AP003900.1-202ENST00000616952 MROH2AA6NES4 1674 aa18.09■□□□□ 0.49
AP003900.1-202ENST00000616952 ABCA6Q8N139 1617 aa18.09■□□□□ 0.49
AP003900.1-202ENST00000616952 SAMD9Q5K651 1589 aa18.05■□□□□ 0.48
AP003900.1-202ENST00000616952 UPF1Q92900 1129 aaKnown RBP eCLIP18.03■□□□□ 0.48
AP003900.1-202ENST00000616952 VWDEQ8N2E2 1590 aa18.02■□□□□ 0.48
AP003900.1-202ENST00000616952 NEURL4Q96JN8 1562 aa18.02■□□□□ 0.48
AP003900.1-202ENST00000616952 MYT1LQ9UL68 1186 aa18.02■□□□□ 0.48
AP003900.1-202ENST00000616952 ZMYM3Q14202 1370 aa18.02■□□□□ 0.47
AP003900.1-202ENST00000616952 RNF17Q9BXT8 1623 aaKnown RBP18.01■□□□□ 0.47
AP003900.1-202ENST00000616952 AFAP1Q8N556 730 aa18.01■□□□□ 0.47
AP003900.1-202ENST00000616952 POLR1AO95602 1720 aaPredicted RBP17.99■□□□□ 0.47
AP003900.1-202ENST00000616952 EFCAB2Q5VUJ9 269 aa17.99■□□□□ 0.47
AP003900.1-202ENST00000616952 MLH3Q9UHC1 1453 aa17.99■□□□□ 0.47
AP003900.1-202ENST00000616952 MYO5CQ9NQX4 1742 aa17.96■□□□□ 0.47
AP003900.1-202ENST00000616952 A2ML1A8K2U0 1454 aa17.94■□□□□ 0.46
AP003900.1-202ENST00000616952 DNMT1P26358 1616 aaKnown RBP17.94■□□□□ 0.46
AP003900.1-202ENST00000616952 PRXQ9BXM0 1461 aa17.93■□□□□ 0.46
AP003900.1-202ENST00000616952 LRRC7Q96NW7 1537 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms