RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 KNSTRNQ9Y448 316 aa17.65■□□□□ 0.42
PPP4R3B-206ENST00000616407 PRDM2Q13029 1718 aa17.65■□□□□ 0.42
PPP4R3B-206ENST00000616407 SNAPC4Q5SXM2 1469 aa17.64■□□□□ 0.41
PPP4R3B-206ENST00000616407 CDCA8Q53HL2 280 aa17.63■□□□□ 0.41
PPP4R3B-206ENST00000616407 CC2D1BQ5T0F9 858 aaKnown RBP17.63■□□□□ 0.41
PPP4R3B-206ENST00000616407 PLPPR3Q6T4P5 718 aa17.63■□□□□ 0.41
PPP4R3B-206ENST00000616407 NEFMP07197 916 aa17.62■□□□□ 0.41
PPP4R3B-206ENST00000616407 CUL7Q14999 1698 aa17.61■□□□□ 0.41
PPP4R3B-206ENST00000616407 TMF1P82094 1093 aa17.61■□□□□ 0.41
PPP4R3B-206ENST00000616407 MAP3K1Q13233 1512 aa17.61■□□□□ 0.41
PPP4R3B-206ENST00000616407 ROCK2O75116 1388 aaKnown RBP17.6■□□□□ 0.41
PPP4R3B-206ENST00000616407 HFM1A2PYH4 1435 aa17.6■□□□□ 0.41
PPP4R3B-206ENST00000616407 KANK1Q14678 1352 aa17.59■□□□□ 0.41
PPP4R3B-206ENST00000616407 EHBP1L1Q8N3D4 1523 aa17.59■□□□□ 0.41
PPP4R3B-206ENST00000616407 GGT6Q6P531 493 aa17.59■□□□□ 0.41
PPP4R3B-206ENST00000616407 SPAG9O60271 1321 aaKnown RBP17.59■□□□□ 0.41
PPP4R3B-206ENST00000616407 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.58■□□□□ 0.41
PPP4R3B-206ENST00000616407 PRG4Q92954 1404 aaPredicted RBP17.58■□□□□ 0.4
PPP4R3B-206ENST00000616407 KIF3BO15066 747 aa17.57■□□□□ 0.4
PPP4R3B-206ENST00000616407 RTL5Q5HYW3 569 aaPredicted RBP17.57■□□□□ 0.4
PPP4R3B-206ENST00000616407 KIAA0586Q9BVV6 1533 aa17.57■□□□□ 0.4
PPP4R3B-206ENST00000616407 NPM2Q86SE8 214 aaKnown RBP17.56■□□□□ 0.4
PPP4R3B-206ENST00000616407 CDK13Q14004 1512 aaKnown RBP17.56■□□□□ 0.4
PPP4R3B-206ENST00000616407 EPRSP07814 1512 aaKnown RBP17.56■□□□□ 0.4
PPP4R3B-206ENST00000616407 MIA2Q96PC5 1412 aa17.55■□□□□ 0.4
PPP4R3B-206ENST00000616407 ANP32AP39687 249 aaKnown RBP17.55■□□□□ 0.4
PPP4R3B-206ENST00000616407 ST20-MTHFSA0A0A6YYL1 179 aa17.55■□□□□ 0.4
PPP4R3B-206ENST00000616407 IQGAP2Q13576 1575 aa17.54■□□□□ 0.4
PPP4R3B-206ENST00000616407 NAIPQ13075 1403 aa17.54■□□□□ 0.4
PPP4R3B-206ENST00000616407 ZNF608Q9ULD9 1512 aaPredicted RBP17.53■□□□□ 0.4
PPP4R3B-206ENST00000616407 ANKRD50Q9ULJ7 1429 aa17.52■□□□□ 0.4
PPP4R3B-206ENST00000616407 KIF15Q9NS87 1388 aa17.52■□□□□ 0.39
PPP4R3B-206ENST00000616407 HECW1Q76N89 1606 aa17.52■□□□□ 0.39
PPP4R3B-206ENST00000616407 TROQ12816 1431 aaPredicted RBP17.51■□□□□ 0.39
PPP4R3B-206ENST00000616407 PRKRIP1Q9H875 184 aaPredicted RBP17.51■□□□□ 0.39
PPP4R3B-206ENST00000616407 PPP4R2Q9NY27 417 aa17.5■□□□□ 0.39
PPP4R3B-206ENST00000616407 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.49■□□□□ 0.39
PPP4R3B-206ENST00000616407 CCDC144AA2RUR9 1427 aa17.49■□□□□ 0.39
PPP4R3B-206ENST00000616407 SUPT6HQ7KZ85 1726 aaKnown RBP17.49■□□□□ 0.39
PPP4R3B-206ENST00000616407 USP47Q96K76 1375 aa17.48■□□□□ 0.39
PPP4R3B-206ENST00000616407 B4GALNT3Q6L9W6 998 aa17.48■□□□□ 0.39
PPP4R3B-206ENST00000616407 BCL11AQ9H165 835 aa17.48■□□□□ 0.39
PPP4R3B-206ENST00000616407 WDR97A6NE52 1622 aa17.47■□□□□ 0.39
PPP4R3B-206ENST00000616407 TNNT2P45379 298 aaPredicted RBP17.47■□□□□ 0.39
PPP4R3B-206ENST00000616407 WASHC2AQ641Q2 1341 aa17.46■□□□□ 0.39
PPP4R3B-206ENST00000616407 KTN1Q86UP2 1357 aaKnown RBP17.45■□□□□ 0.38
PPP4R3B-206ENST00000616407 SYNJ2O15056 1496 aa17.45■□□□□ 0.38
PPP4R3B-206ENST00000616407 DAPK1P53355 1430 aa17.44■□□□□ 0.38
PPP4R3B-206ENST00000616407 GRIN2AQ12879 1464 aa17.44■□□□□ 0.38
PPP4R3B-206ENST00000616407 RALBP1Q15311 655 aa17.44■□□□□ 0.38
PPP4R3B-206ENST00000616407 NBPF8Q3BBV2 869 aa17.44■□□□□ 0.38
PPP4R3B-206ENST00000616407 PLB1Q6P1J6 1458 aa17.43■□□□□ 0.38
PPP4R3B-206ENST00000616407 KIF7Q2M1P5 1343 aa17.43■□□□□ 0.38
PPP4R3B-206ENST00000616407 SLC24A1O60721 1099 aa17.42■□□□□ 0.38
PPP4R3B-206ENST00000616407 CCDC7Q96M83 1385 aa17.42■□□□□ 0.38
PPP4R3B-206ENST00000616407 NEUROD2Q15784 382 aa17.42■□□□□ 0.38
PPP4R3B-206ENST00000616407 ARID4BQ4LE39 1312 aaPredicted RBP17.41■□□□□ 0.38
PPP4R3B-206ENST00000616407 POGKQ9P215 609 aa17.4■□□□□ 0.38
PPP4R3B-206ENST00000616407 SAFB2Q14151 953 aaKnown RBP eCLIP17.4■□□□□ 0.38
PPP4R3B-206ENST00000616407 MLECQ14165 292 aa17.4■□□□□ 0.38
PPP4R3B-206ENST00000616407 CFAP53Q96M91 514 aa17.39■□□□□ 0.37
PPP4R3B-206ENST00000616407 AFAP1Q8N556 730 aa17.38■□□□□ 0.37
PPP4R3B-206ENST00000616407 PTPN23Q9H3S7 1636 aa17.38■□□□□ 0.37
PPP4R3B-206ENST00000616407 ZBTB47Q9UFB7 747 aaPredicted RBP17.38■□□□□ 0.37
PPP4R3B-206ENST00000616407 OSCARQ8IYS5 282 aa17.38■□□□□ 0.37
PPP4R3B-206ENST00000616407 PTPRKQ15262 1439 aa17.37■□□□□ 0.37
PPP4R3B-206ENST00000616407 C9orf84Q5VXU9 1444 aa17.37■□□□□ 0.37
PPP4R3B-206ENST00000616407 NLRP13Q86W25 1043 aa17.36■□□□□ 0.37
PPP4R3B-206ENST00000616407 MAGI1Q96QZ7 1491 aaPredicted RBP17.36■□□□□ 0.37
PPP4R3B-206ENST00000616407 WASHC2CQ9Y4E1 1318 aa17.35■□□□□ 0.37
PPP4R3B-206ENST00000616407 ABCC5O15440 1437 aa17.35■□□□□ 0.37
PPP4R3B-206ENST00000616407 STK26Q9P289 416 aa17.35■□□□□ 0.37
PPP4R3B-206ENST00000616407 ROCK1Q13464 1354 aa17.34■□□□□ 0.37
PPP4R3B-206ENST00000616407 PPM1GO15355 546 aaPredicted RBP17.34■□□□□ 0.37
PPP4R3B-206ENST00000616407 PANK3Q9H999 370 aa17.34■□□□□ 0.37
PPP4R3B-206ENST00000616407 ARHGAP5Q13017 1502 aa17.33■□□□□ 0.37
PPP4R3B-206ENST00000616407 KIAA1107Q9UPP5 1409 aa17.33■□□□□ 0.37
PPP4R3B-206ENST00000616407 NUTM2DQ5VT03 806 aaPredicted RBP17.33■□□□□ 0.37
PPP4R3B-206ENST00000616407 CNTLNQ9NXG0 1405 aa17.32■□□□□ 0.36
PPP4R3B-206ENST00000616407 MORC1Q86VD1 984 aa17.32■□□□□ 0.36
PPP4R3B-206ENST00000616407 SRPK2P78362 688 aaKnown RBP17.31■□□□□ 0.36
PPP4R3B-206ENST00000616407 NUDCQ9Y266 331 aa17.31■□□□□ 0.36
PPP4R3B-206ENST00000616407 MYBBP1AQ9BQG0 1328 aaKnown RBP17.3■□□□□ 0.36
PPP4R3B-206ENST00000616407 ARHGEF11O15085 1522 aa17.3■□□□□ 0.36
PPP4R3B-206ENST00000616407 MAPKBP1O60336 1514 aa17.3■□□□□ 0.36
PPP4R3B-206ENST00000616407 TSHZ2Q9NRE2 1034 aa17.3■□□□□ 0.36
PPP4R3B-206ENST00000616407 THOC2Q8NI27 1593 aaKnown RBP17.29■□□□□ 0.36
PPP4R3B-206ENST00000616407 ERICH6BQ5W0A0 696 aa17.28■□□□□ 0.36
PPP4R3B-206ENST00000616407 CYB5RLQ6IPT4 315 aa17.28■□□□□ 0.36
PPP4R3B-206ENST00000616407 TRAK1Q9UPV9 953 aa17.28■□□□□ 0.36
PPP4R3B-206ENST00000616407 ANKRD30BQ9BXX2 1392 aa17.28■□□□□ 0.36
PPP4R3B-206ENST00000616407 RBM19Q9Y4C8 960 aaKnown RBP17.28■□□□□ 0.36
PPP4R3B-206ENST00000616407 RCAN3Q9UKA8 241 aa17.27■□□□□ 0.36
PPP4R3B-206ENST00000616407 CAMSAP2Q08AD1 1489 aa17.27■□□□□ 0.35
PPP4R3B-206ENST00000616407 CTTNBP2Q8WZ74 1663 aa17.27■□□□□ 0.35
PPP4R3B-206ENST00000616407 EIF3AQ14152 1382 aaKnown RBP17.27■□□□□ 0.35
PPP4R3B-206ENST00000616407 U2SURPO15042 1029 aaKnown RBP17.26■□□□□ 0.35
PPP4R3B-206ENST00000616407 ZBED9Q6R2W3 1325 aa17.26■□□□□ 0.35
PPP4R3B-206ENST00000616407 NBPF1Q3BBV0 1214 aa17.26■□□□□ 0.35
PPP4R3B-206ENST00000616407 NCOA1Q15788 1441 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms