RNA–Protein interactions for RNA: ENST00000616386.1

PVT1-224, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 113 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-224ENST00000616386 PHLDB1Q86UU1 1377 aa4.07□□□□□ -1.76
PVT1-224ENST00000616386 FER1L4A9Z1Z3 1794 aa4.07□□□□□ -1.76
PVT1-224ENST00000616386 ARHGEF40Q8TER5 1519 aa4.06□□□□□ -1.76
PVT1-224ENST00000616386 NEO1Q92859 1461 aa4.06□□□□□ -1.76
PVT1-224ENST00000616386 TOM1O60784 492 aa4.06□□□□□ -1.76
PVT1-224ENST00000616386 ZNF777Q9ULD5 760 aaPredicted RBP4.06□□□□□ -1.76
PVT1-224ENST00000616386 STRCQ7RTU9 1775 aa4.05□□□□□ -1.76
PVT1-224ENST00000616386 SIGLEC1Q9BZZ2 1709 aa4.05□□□□□ -1.76
PVT1-224ENST00000616386 PPP6R1Q9UPN7 881 aa4.05□□□□□ -1.76
PVT1-224ENST00000616386 HECW1Q76N89 1606 aa4.05□□□□□ -1.76
PVT1-224ENST00000616386 ABCA9Q8IUA7 1624 aa4.05□□□□□ -1.76
PVT1-224ENST00000616386 MED1Q15648 1581 aaPredicted RBP4.05□□□□□ -1.76
PVT1-224ENST00000616386 FHOD3Q2V2M9 1422 aa4.04□□□□□ -1.76
PVT1-224ENST00000616386 PREX1Q8TCU6 1659 aa4.04□□□□□ -1.76
PVT1-224ENST00000616386 EFCAB2Q5VUJ9 269 aa4.04□□□□□ -1.76
PVT1-224ENST00000616386 GGT6Q6P531 493 aa4.04□□□□□ -1.76
PVT1-224ENST00000616386 EFCAB5A4FU69 1503 aa4.04□□□□□ -1.76
PVT1-224ENST00000616386 ATP10AO60312 1499 aa4.04□□□□□ -1.76
PVT1-224ENST00000616386 PTPRTO14522 1441 aa4.04□□□□□ -1.76
PVT1-224ENST00000616386 C9orf84Q5VXU9 1444 aa4.04□□□□□ -1.76
PVT1-224ENST00000616386 LTBP4Q8N2S1 1624 aa4.03□□□□□ -1.76
PVT1-224ENST00000616386 TRIM52Q96A61 297 aa4.03□□□□□ -1.76
PVT1-224ENST00000616386 CTTNBP2Q8WZ74 1663 aa4.03□□□□□ -1.76
PVT1-224ENST00000616386 CAMSAP1Q5T5Y3 1602 aa4.03□□□□□ -1.77
PVT1-224ENST00000616386 RAPGEF6Q8TEU7 1601 aa4.03□□□□□ -1.77
PVT1-224ENST00000616386 TTC37Q6PGP7 1564 aa4.02□□□□□ -1.77
PVT1-224ENST00000616386 RICTORQ6R327 1708 aa4.02□□□□□ -1.77
PVT1-224ENST00000616386 TRAPPC8Q9Y2L5 1435 aa4.02□□□□□ -1.77
PVT1-224ENST00000616386 CDK13Q14004 1512 aaKnown RBP4.01□□□□□ -1.77
PVT1-224ENST00000616386 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.01□□□□□ -1.77
PVT1-224ENST00000616386 ARHGEF12Q9NZN5 1544 aa4.01□□□□□ -1.77
PVT1-224ENST00000616386 NUP153P49790 1475 aaKnown RBP4.01□□□□□ -1.77
PVT1-224ENST00000616386 UBTFP17480 764 aaKnown RBP4.01□□□□□ -1.77
PVT1-224ENST00000616386 POTEAQ6S8J7 498 aa4.01□□□□□ -1.77
PVT1-224ENST00000616386 RBM33Q96EV2 1170 aaKnown RBP4.01□□□□□ -1.77
PVT1-224ENST00000616386 RGS17Q9UGC6 210 aaPredicted RBP4.01□□□□□ -1.77
PVT1-224ENST00000616386 NCOA1Q15788 1441 aa4.01□□□□□ -1.77
PVT1-224ENST00000616386 ZMYM3Q14202 1370 aa4.01□□□□□ -1.77
PVT1-224ENST00000616386 ARHGAP5Q13017 1502 aa4□□□□□ -1.77
PVT1-224ENST00000616386 HNRNPMP52272 730 aaKnown RBP eCLIP4□□□□□ -1.77
PVT1-224ENST00000616386 PKD2Q13563 968 aa4□□□□□ -1.77
PVT1-224ENST00000616386 C3P01024 1663 aa4□□□□□ -1.77
PVT1-224ENST00000616386 MAGI2Q86UL8 1455 aa3.99□□□□□ -1.77
PVT1-224ENST00000616386 CFAP74Q9C0B2 1584 aa3.99□□□□□ -1.77
PVT1-224ENST00000616386 PLCH2O75038 1416 aa3.99□□□□□ -1.77
PVT1-224ENST00000616386 MEX3CQ5U5Q3 659 aaKnown RBP3.99□□□□□ -1.77
PVT1-224ENST00000616386 FBXO31Q5XUX0 539 aaPredicted RBP3.99□□□□□ -1.77
PVT1-224ENST00000616386 CSRNP3Q8WYN3 585 aa3.99□□□□□ -1.77
PVT1-224ENST00000616386 CDK11AQ9UQ88 783 aaPredicted RBP3.99□□□□□ -1.77
PVT1-224ENST00000616386 ZMYM4Q5VZL5 1548 aa3.99□□□□□ -1.77
PVT1-224ENST00000616386 ANKLE2Q86XL3 938 aa3.98□□□□□ -1.77
PVT1-224ENST00000616386 BCANQ96GW7 911 aa3.98□□□□□ -1.77
PVT1-224ENST00000616386 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.98□□□□□ -1.77
PVT1-224ENST00000616386 IQSEC2Q5JU85 1478 aa3.98□□□□□ -1.77
PVT1-224ENST00000616386 SPAG9O60271 1321 aaKnown RBP3.97□□□□□ -1.77
PVT1-224ENST00000616386 NUTM2BA6NNL0 878 aaPredicted RBP3.97□□□□□ -1.77
PVT1-224ENST00000616386 NUTM2EB1AL46 878 aaPredicted RBP3.97□□□□□ -1.77
PVT1-224ENST00000616386 NUTM2AQ8IVF1 878 aaPredicted RBP3.97□□□□□ -1.77
PVT1-224ENST00000616386 SUPT6HQ7KZ85 1726 aaKnown RBP3.97□□□□□ -1.77
PVT1-224ENST00000616386 ZNF518AQ6AHZ1 1483 aa3.97□□□□□ -1.77
PVT1-224ENST00000616386 PTPRKQ15262 1439 aa3.96□□□□□ -1.77
PVT1-224ENST00000616386 KIF3BO15066 747 aa3.96□□□□□ -1.78
PVT1-224ENST00000616386 NUTM2DQ5VT03 806 aaPredicted RBP3.96□□□□□ -1.78
PVT1-224ENST00000616386 PRXQ9BXM0 1461 aa3.96□□□□□ -1.78
PVT1-224ENST00000616386 SHANK2Q9UPX8 1470 aa3.96□□□□□ -1.78
PVT1-224ENST00000616386 DIP2CQ9Y2E4 1556 aa3.96□□□□□ -1.78
PVT1-224ENST00000616386 SETD1BQ9UPS6 1966 aaKnown RBP3.96□□□□□ -1.78
PVT1-224ENST00000616386 CNTLNQ9NXG0 1405 aa3.95□□□□□ -1.78
PVT1-224ENST00000616386 KIF14Q15058 1648 aa3.95□□□□□ -1.78
PVT1-224ENST00000616386 ABCA6Q8N139 1617 aa3.95□□□□□ -1.78
PVT1-224ENST00000616386 SETD1AO15047 1707 aaKnown RBP3.95□□□□□ -1.78
PVT1-224ENST00000616386 C14orf37Q86TY3 774 aa3.95□□□□□ -1.78
PVT1-224ENST00000616386 THEMISQ8N1K5 641 aaPredicted RBP3.95□□□□□ -1.78
PVT1-224ENST00000616386 UPF1Q92900 1129 aaKnown RBP eCLIP3.95□□□□□ -1.78
PVT1-224ENST00000616386 CLIP1P30622 1438 aa3.95□□□□□ -1.78
PVT1-224ENST00000616386 WASHC2CQ9Y4E1 1318 aa3.95□□□□□ -1.78
PVT1-224ENST00000616386 CLTCQ00610 1675 aaKnown RBP3.94□□□□□ -1.78
PVT1-224ENST00000616386 CEP170BQ9Y4F5 1589 aaPredicted RBP3.94□□□□□ -1.78
PVT1-224ENST00000616386 TNRQ92752 1358 aa3.94□□□□□ -1.78
PVT1-224ENST00000616386 PROSER2Q86WR7 435 aaPredicted RBP3.94□□□□□ -1.78
PVT1-224ENST00000616386 CFDP1Q9UEE9 299 aaPredicted RBP3.94□□□□□ -1.78
PVT1-224ENST00000616386 STAG3Q9UJ98 1225 aa3.94□□□□□ -1.78
PVT1-224ENST00000616386 MYO5CQ9NQX4 1742 aa3.94□□□□□ -1.78
PVT1-224ENST00000616386 NPATQ14207 1427 aa3.94□□□□□ -1.78
PVT1-224ENST00000616386 SAMD9Q5K651 1589 aa3.93□□□□□ -1.78
PVT1-224ENST00000616386 MYO3AQ8NEV4 1616 aa3.93□□□□□ -1.78
PVT1-224ENST00000616386 TXNDC2Q86VQ3 553 aa3.93□□□□□ -1.78
PVT1-224ENST00000616386 CPS1P31327 1500 aa3.93□□□□□ -1.78
PVT1-224ENST00000616386 NPHP4O75161 1426 aaPredicted RBP3.93□□□□□ -1.78
PVT1-224ENST00000616386 ZNF644Q9H582 1327 aaPredicted RBP3.93□□□□□ -1.78
PVT1-224ENST00000616386 RXRBP28702 533 aa3.92□□□□□ -1.78
PVT1-224ENST00000616386 SLC26A8Q96RN1 970 aa3.92□□□□□ -1.78
PVT1-224ENST00000616386 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.92□□□□□ -1.78
PVT1-224ENST00000616386 TROQ12816 1431 aaPredicted RBP3.92□□□□□ -1.78
PVT1-224ENST00000616386 A2ML1A8K2U0 1454 aa3.92□□□□□ -1.78
PVT1-224ENST00000616386 PLA2R1Q13018 1463 aa3.92□□□□□ -1.78
PVT1-224ENST00000616386 TCOF1Q13428 1488 aaKnown RBP3.92□□□□□ -1.78
PVT1-224ENST00000616386 MLH3Q9UHC1 1453 aa3.92□□□□□ -1.78
PVT1-224ENST00000616386 KDM5CP41229 1560 aa3.91□□□□□ -1.78
PVT1-224ENST00000616386 DNMT1P26358 1616 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms