RNA–Protein interactions for RNA: ENST00000615945.4

TMC4-208, Transcript of transmembrane channel like 4, humanhuman

TSL 2

Gene TMC4, Length 506 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC4-208ENST00000615945 ZNF335Q9H4Z2 1342 aaPredicted RBP10.32□□□□□ -0.76
TMC4-208ENST00000615945 DENND4BO75064 1496 aaPredicted RBP10.3□□□□□ -0.76
TMC4-208ENST00000615945 HECW1Q76N89 1606 aa10.3□□□□□ -0.76
TMC4-208ENST00000615945 ALKQ9UM73 1620 aa10.29□□□□□ -0.76
TMC4-208ENST00000615945 RGS17Q9UGC6 210 aaPredicted RBP10.29□□□□□ -0.76
TMC4-208ENST00000615945 CTTNBP2Q8WZ74 1663 aa10.28□□□□□ -0.76
TMC4-208ENST00000615945 CAMSAP1Q5T5Y3 1602 aa10.28□□□□□ -0.76
TMC4-208ENST00000615945 ATP10BO94823 1461 aa10.28□□□□□ -0.76
TMC4-208ENST00000615945 ARID3CA6NKF2 412 aa10.27□□□□□ -0.77
TMC4-208ENST00000615945 CFAP74Q9C0B2 1584 aa10.26□□□□□ -0.77
TMC4-208ENST00000615945 PIP4K2BP78356 416 aa10.24□□□□□ -0.77
TMC4-208ENST00000615945 SCAF1Q9H7N4 1312 aaKnown RBP10.24□□□□□ -0.77
TMC4-208ENST00000615945 MAGI2Q86UL8 1455 aa10.23□□□□□ -0.77
TMC4-208ENST00000615945 SUPT6HQ7KZ85 1726 aaKnown RBP10.23□□□□□ -0.77
TMC4-208ENST00000615945 C9orf84Q5VXU9 1444 aa10.22□□□□□ -0.77
TMC4-208ENST00000615945 ATP10AO60312 1499 aa10.2□□□□□ -0.78
TMC4-208ENST00000615945 ZNF142P52746 1687 aaPredicted RBP10.19□□□□□ -0.78
TMC4-208ENST00000615945 NCKAP5LQ9HCH0 1330 aa10.19□□□□□ -0.78
TMC4-208ENST00000615945 GOLGA3Q08378 1498 aa10.18□□□□□ -0.78
TMC4-208ENST00000615945 RAPGEF2Q9Y4G8 1499 aa10.17□□□□□ -0.78
TMC4-208ENST00000615945 TRAPPC8Q9Y2L5 1435 aa10.17□□□□□ -0.78
TMC4-208ENST00000615945 POTEAQ6S8J7 498 aa10.17□□□□□ -0.78
TMC4-208ENST00000615945 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.17□□□□□ -0.78
TMC4-208ENST00000615945 TCOF1Q13428 1488 aaKnown RBP10.17□□□□□ -0.78
TMC4-208ENST00000615945 MYO3AQ8NEV4 1616 aa10.16□□□□□ -0.78
TMC4-208ENST00000615945 RAPGEF6Q8TEU7 1601 aa10.15□□□□□ -0.78
TMC4-208ENST00000615945 DIP2CQ9Y2E4 1556 aa10.14□□□□□ -0.79
TMC4-208ENST00000615945 ABCA6Q8N139 1617 aa10.14□□□□□ -0.79
TMC4-208ENST00000615945 PLA2R1Q13018 1463 aa10.13□□□□□ -0.79
TMC4-208ENST00000615945 SENP3Q9H4L4 574 aaPredicted RBP10.13□□□□□ -0.79
TMC4-208ENST00000615945 REREQ9P2R6 1566 aa10.13□□□□□ -0.79
TMC4-208ENST00000615945 POLR1AO95602 1720 aaPredicted RBP10.13□□□□□ -0.79
TMC4-208ENST00000615945 CPS1P31327 1500 aa10.12□□□□□ -0.79
TMC4-208ENST00000615945 TOM1O60784 492 aa10.12□□□□□ -0.79
TMC4-208ENST00000615945 MROH2AA6NES4 1674 aa10.12□□□□□ -0.79
TMC4-208ENST00000615945 STRCP1A6NGW2 1772 aa10.11□□□□□ -0.79
TMC4-208ENST00000615945 NEURL4Q96JN8 1562 aa10.11□□□□□ -0.79
TMC4-208ENST00000615945 CEP170BQ9Y4F5 1589 aaPredicted RBP10.11□□□□□ -0.79
TMC4-208ENST00000615945 SCAPERQ9BY12 1400 aa10.11□□□□□ -0.79
TMC4-208ENST00000615945 NUP153P49790 1475 aaKnown RBP10.1□□□□□ -0.79
TMC4-208ENST00000615945 KDM5CP41229 1560 aa10.1□□□□□ -0.79
TMC4-208ENST00000615945 VWDEQ8N2E2 1590 aa10.09□□□□□ -0.79
TMC4-208ENST00000615945 AGLP35573 1532 aa10.09□□□□□ -0.79
TMC4-208ENST00000615945 SHANK2Q9UPX8 1470 aa10.08□□□□□ -0.8
TMC4-208ENST00000615945 NPATQ14207 1427 aa10.07□□□□□ -0.8
TMC4-208ENST00000615945 PTPRKQ15262 1439 aa10.07□□□□□ -0.8
TMC4-208ENST00000615945 PPP6R1Q9UPN7 881 aa10.07□□□□□ -0.8
TMC4-208ENST00000615945 RNF17Q9BXT8 1623 aaKnown RBP10.07□□□□□ -0.8
TMC4-208ENST00000615945 PKD2Q13563 968 aa10.06□□□□□ -0.8
TMC4-208ENST00000615945 UPF1Q92900 1129 aaKnown RBP eCLIP10.06□□□□□ -0.8
TMC4-208ENST00000615945 SAMD9Q5K651 1589 aa10.05□□□□□ -0.8
TMC4-208ENST00000615945 MYO5CQ9NQX4 1742 aa10.05□□□□□ -0.8
TMC4-208ENST00000615945 CLTCQ00610 1675 aaKnown RBP10.05□□□□□ -0.8
TMC4-208ENST00000615945 DNMT1P26358 1616 aaKnown RBP10.04□□□□□ -0.8
TMC4-208ENST00000615945 XIRP1Q702N8 1843 aaKnown RBP10.03□□□□□ -0.8
TMC4-208ENST00000615945 P3H3Q8IVL6 736 aa10.03□□□□□ -0.8
TMC4-208ENST00000615945 CNTLNQ9NXG0 1405 aa10.03□□□□□ -0.8
TMC4-208ENST00000615945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.02□□□□□ -0.81
TMC4-208ENST00000615945 HNRNPUL2Q1KMD3 747 aaKnown RBP10.02□□□□□ -0.81
TMC4-208ENST00000615945 ZNF518AQ6AHZ1 1483 aa10.02□□□□□ -0.81
TMC4-208ENST00000615945 PLCH2O75038 1416 aa10.01□□□□□ -0.81
TMC4-208ENST00000615945 KIDINS220Q9ULH0 1771 aa10□□□□□ -0.81
TMC4-208ENST00000615945 SYNMO15061 1565 aa10□□□□□ -0.81
TMC4-208ENST00000615945 LRRC7Q96NW7 1537 aa9.99□□□□□ -0.81
TMC4-208ENST00000615945 ZMYM3Q14202 1370 aa9.98□□□□□ -0.81
TMC4-208ENST00000615945 AFAP1Q8N556 730 aa9.97□□□□□ -0.81
TMC4-208ENST00000615945 MLH3Q9UHC1 1453 aa9.97□□□□□ -0.81
TMC4-208ENST00000615945 KIF14Q15058 1648 aa9.96□□□□□ -0.81
TMC4-208ENST00000615945 SUPT5HO00267 1087 aaKnown RBP9.96□□□□□ -0.82
TMC4-208ENST00000615945 ESF1Q9H501 851 aaKnown RBP9.96□□□□□ -0.82
TMC4-208ENST00000615945 A2ML1A8K2U0 1454 aa9.96□□□□□ -0.82
TMC4-208ENST00000615945 CDK13Q14004 1512 aaKnown RBP9.96□□□□□ -0.82
TMC4-208ENST00000615945 ITSN2Q9NZM3 1697 aa9.96□□□□□ -0.82
TMC4-208ENST00000615945 IQGAP1P46940 1657 aa9.95□□□□□ -0.82
TMC4-208ENST00000615945 EP400Q96L91 3159 aa9.94□□□□□ -0.82
TMC4-208ENST00000615945 CDC42BPBQ9Y5S2 1711 aa9.94□□□□□ -0.82
TMC4-208ENST00000615945 PLEKHD1A6NEE1 506 aa9.94□□□□□ -0.82
TMC4-208ENST00000615945 SETBP1Q9Y6X0 1596 aa9.93□□□□□ -0.82
TMC4-208ENST00000615945 ROBO1Q9Y6N7 1651 aa9.93□□□□□ -0.82
TMC4-208ENST00000615945 DEPDC5O75140 1603 aa9.93□□□□□ -0.82
TMC4-208ENST00000615945 ZC3H13Q5T200 1668 aaKnown RBP9.91□□□□□ -0.82
TMC4-208ENST00000615945 TRIM52Q96A61 297 aa9.91□□□□□ -0.82
TMC4-208ENST00000615945 ABCC1P33527 1531 aa9.91□□□□□ -0.82
TMC4-208ENST00000615945 ARHGAP5Q13017 1502 aa9.91□□□□□ -0.82
TMC4-208ENST00000615945 PRXQ9BXM0 1461 aa9.91□□□□□ -0.82
TMC4-208ENST00000615945 MED14O60244 1454 aa9.9□□□□□ -0.83
TMC4-208ENST00000615945 PLXNC1O60486 1568 aa9.89□□□□□ -0.83
TMC4-208ENST00000615945 EFCAB2Q5VUJ9 269 aa9.89□□□□□ -0.83
TMC4-208ENST00000615945 NPHP4O75161 1426 aaPredicted RBP9.89□□□□□ -0.83
TMC4-208ENST00000615945 LRP6O75581 1613 aa9.89□□□□□ -0.83
TMC4-208ENST00000615945 MYT1LQ9UL68 1186 aa9.88□□□□□ -0.83
TMC4-208ENST00000615945 PHLPP1O60346 1717 aa9.87□□□□□ -0.83
TMC4-208ENST00000615945 FAM135BQ49AJ0 1406 aa9.87□□□□□ -0.83
TMC4-208ENST00000615945 FAM9AQ8IZU1 332 aaPredicted RBP9.86□□□□□ -0.83
TMC4-208ENST00000615945 PREX2Q70Z35 1606 aa9.85□□□□□ -0.83
TMC4-208ENST00000615945 SAMD9LQ8IVG5 1584 aa9.85□□□□□ -0.83
TMC4-208ENST00000615945 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.85□□□□□ -0.83
TMC4-208ENST00000615945 COL16A1Q07092 1604 aaPredicted RBP9.83□□□□□ -0.84
TMC4-208ENST00000615945 LRRIQ1Q96JM4 1722 aa9.83□□□□□ -0.84
TMC4-208ENST00000615945 CDK12Q9NYV4 1490 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms