RNA–Protein interactions for RNA: ENST00000615310.4

RET-205, Transcript of ret proto-oncogene, humanhuman

TSL 5 BASIC

Gene RET, Length 4,337 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-205ENST00000615310 UPF2Q9HAU5 1272 aaKnown RBP18.7■□□□□ 0.58
RET-205ENST00000615310 EFCAB2Q5VUJ9 269 aa18.7■□□□□ 0.58
RET-205ENST00000615310 MYOM3Q5VTT5 1437 aa18.69■□□□□ 0.58
RET-205ENST00000615310 SAFB2Q14151 953 aaKnown RBP eCLIP18.69■□□□□ 0.58
RET-205ENST00000615310 PRKRIP1Q9H875 184 aaPredicted RBP18.68■□□□□ 0.58
RET-205ENST00000615310 CASKIN1Q8WXD9 1431 aa18.67■□□□□ 0.58
RET-205ENST00000615310 RGS3P49796 1198 aa18.66■□□□□ 0.58
RET-205ENST00000615310 FRAT1Q92837 279 aaPredicted RBP18.65■□□□□ 0.58
RET-205ENST00000615310 NCOA2Q15596 1464 aa18.65■□□□□ 0.58
RET-205ENST00000615310 PLEKHG5O94827 1062 aa18.64■□□□□ 0.57
RET-205ENST00000615310 CFAP53Q96M91 514 aa18.64■□□□□ 0.57
RET-205ENST00000615310 HMGXB3Q12766 1538 aa18.64■□□□□ 0.57
RET-205ENST00000615310 KIF3BO15066 747 aa18.63■□□□□ 0.57
RET-205ENST00000615310 UACAQ9BZF9 1416 aa18.63■□□□□ 0.57
RET-205ENST00000615310 POLA1P09884 1462 aaPredicted RBP18.63■□□□□ 0.57
RET-205ENST00000615310 HSP90AA1P07900 732 aaKnown RBP18.63■□□□□ 0.57
RET-205ENST00000615310 KTN1Q86UP2 1357 aaKnown RBP18.62■□□□□ 0.57
RET-205ENST00000615310 POGKQ9P215 609 aa18.61■□□□□ 0.57
RET-205ENST00000615310 ARXQ96QS3 562 aa18.6■□□□□ 0.57
RET-205ENST00000615310 TOPBP1Q92547 1522 aa18.6■□□□□ 0.57
RET-205ENST00000615310 KANK1Q14678 1352 aa18.59■□□□□ 0.57
RET-205ENST00000615310 U2SURPO15042 1029 aaKnown RBP18.58■□□□□ 0.57
RET-205ENST00000615310 EIF5BO60841 1220 aaKnown RBP18.58■□□□□ 0.57
RET-205ENST00000615310 PTPRGP23470 1445 aa18.58■□□□□ 0.57
RET-205ENST00000615310 RALBP1Q15311 655 aa18.58■□□□□ 0.56
RET-205ENST00000615310 RCAN3Q9UKA8 241 aa18.57■□□□□ 0.56
RET-205ENST00000615310 MLECQ14165 292 aa18.57■□□□□ 0.56
RET-205ENST00000615310 STK26Q9P289 416 aa18.57■□□□□ 0.56
RET-205ENST00000615310 CC2D2AQ9P2K1 1620 aa18.57■□□□□ 0.56
RET-205ENST00000615310 USP47Q96K76 1375 aa18.56■□□□□ 0.56
RET-205ENST00000615310 WASHC2AQ641Q2 1341 aa18.56■□□□□ 0.56
RET-205ENST00000615310 LAS1LQ9Y4W2 734 aaKnown RBP18.56■□□□□ 0.56
RET-205ENST00000615310 SPAG9O60271 1321 aaKnown RBP18.56■□□□□ 0.56
RET-205ENST00000615310 NUDCQ9Y266 331 aa18.56■□□□□ 0.56
RET-205ENST00000615310 ARID4BQ4LE39 1312 aaPredicted RBP18.55■□□□□ 0.56
RET-205ENST00000615310 FYCO1Q9BQS8 1478 aa18.55■□□□□ 0.56
RET-205ENST00000615310 RSPH4AQ5TD94 716 aa18.55■□□□□ 0.56
RET-205ENST00000615310 NUTM2DQ5VT03 806 aaPredicted RBP18.54■□□□□ 0.56
RET-205ENST00000615310 NLRP13Q86W25 1043 aa18.54■□□□□ 0.56
RET-205ENST00000615310 MORC1Q86VD1 984 aa18.53■□□□□ 0.56
RET-205ENST00000615310 TIAM1Q13009 1591 aa18.53■□□□□ 0.56
RET-205ENST00000615310 KIF7Q2M1P5 1343 aa18.53■□□□□ 0.56
RET-205ENST00000615310 SRPK2P78362 688 aaKnown RBP18.53■□□□□ 0.56
RET-205ENST00000615310 NOP58Q9Y2X3 529 aaKnown RBP18.52■□□□□ 0.56
RET-205ENST00000615310 FTSJ3Q8IY81 847 aaKnown RBP18.51■□□□□ 0.55
RET-205ENST00000615310 PANK3Q9H999 370 aa18.51■□□□□ 0.55
RET-205ENST00000615310 MAPK8IP3Q9UPT6 1336 aa18.5■□□□□ 0.55
RET-205ENST00000615310 CCDC144AA2RUR9 1427 aa18.5■□□□□ 0.55
RET-205ENST00000615310 C14orf37Q86TY3 774 aa18.5■□□□□ 0.55
RET-205ENST00000615310 CCDC7Q96M83 1385 aa18.49■□□□□ 0.55
RET-205ENST00000615310 UNC13AQ9UPW8 1703 aa18.48■□□□□ 0.55
RET-205ENST00000615310 ERICH6BQ5W0A0 696 aa18.48■□□□□ 0.55
RET-205ENST00000615310 ZBTB7CA1YPR0 619 aa18.48■□□□□ 0.55
RET-205ENST00000615310 NBPF8Q3BBV2 869 aa18.48■□□□□ 0.55
RET-205ENST00000615310 CCDC146Q8IYE0 955 aa18.48■□□□□ 0.55
RET-205ENST00000615310 PEG3Q9GZU2 1588 aa18.47■□□□□ 0.55
RET-205ENST00000615310 RTN4Q9NQC3 1192 aaKnown RBP18.47■□□□□ 0.55
RET-205ENST00000615310 GRIN2BQ13224 1484 aa18.45■□□□□ 0.54
RET-205ENST00000615310 DDRGK1Q96HY6 314 aa18.45■□□□□ 0.54
RET-205ENST00000615310 KIF15Q9NS87 1388 aa18.44■□□□□ 0.54
RET-205ENST00000615310 WDR97A6NE52 1622 aa18.44■□□□□ 0.54
RET-205ENST00000615310 PRDM2Q13029 1718 aa18.43■□□□□ 0.54
RET-205ENST00000615310 TRAK1Q9UPV9 953 aa18.43■□□□□ 0.54
RET-205ENST00000615310 ZBED9Q6R2W3 1325 aa18.43■□□□□ 0.54
RET-205ENST00000615310 MYBBP1AQ9BQG0 1328 aaKnown RBP18.43■□□□□ 0.54
RET-205ENST00000615310 ANKRD50Q9ULJ7 1429 aa18.43■□□□□ 0.54
RET-205ENST00000615310 SOX12O15370 315 aa18.43■□□□□ 0.54
RET-205ENST00000615310 HFM1A2PYH4 1435 aa18.42■□□□□ 0.54
RET-205ENST00000615310 MYH16Q9H6N6 1097 aa18.42■□□□□ 0.54
RET-205ENST00000615310 PLIN1O60240 522 aa18.42■□□□□ 0.54
RET-205ENST00000615310 PRG4Q92954 1404 aaPredicted RBP18.41■□□□□ 0.54
RET-205ENST00000615310 U2AF1L5P0DN76 240 aaPredicted RBP18.41■□□□□ 0.54
RET-205ENST00000615310 U2AF1Q01081 240 aaKnown RBP eCLIP18.41■□□□□ 0.54
RET-205ENST00000615310 CCDC184Q52MB2 194 aa18.41■□□□□ 0.54
RET-205ENST00000615310 EFCAB5A4FU69 1503 aa18.41■□□□□ 0.54
RET-205ENST00000615310 DNMBPQ6XZF7 1577 aa18.39■□□□□ 0.53
RET-205ENST00000615310 ABCA10Q8WWZ4 1543 aa18.38■□□□□ 0.53
RET-205ENST00000615310 NAIPQ13075 1403 aa18.38■□□□□ 0.53
RET-205ENST00000615310 WASHC2CQ9Y4E1 1318 aa18.38■□□□□ 0.53
RET-205ENST00000615310 BECN1Q14457 450 aa18.37■□□□□ 0.53
RET-205ENST00000615310 GOLGA2Q08379 1002 aa18.36■□□□□ 0.53
RET-205ENST00000615310 PCF11O94913 1555 aaKnown RBP18.36■□□□□ 0.53
RET-205ENST00000615310 CNTLNQ9NXG0 1405 aa18.36■□□□□ 0.53
RET-205ENST00000615310 EXOC6Q8TAG9 804 aa18.35■□□□□ 0.53
RET-205ENST00000615310 DEKP35659 375 aaKnown RBP18.35■□□□□ 0.53
RET-205ENST00000615310 CDK13Q14004 1512 aaKnown RBP18.34■□□□□ 0.53
RET-205ENST00000615310 AFAP1Q8N556 730 aa18.34■□□□□ 0.53
RET-205ENST00000615310 RRP7AQ9Y3A4 280 aaKnown RBP18.34■□□□□ 0.53
RET-205ENST00000615310 NBPF1Q3BBV0 1214 aa18.33■□□□□ 0.53
RET-205ENST00000615310 CLUAP1Q96AJ1 413 aa18.33■□□□□ 0.52
RET-205ENST00000615310 PDE3BQ13370 1112 aa18.32■□□□□ 0.52
RET-205ENST00000615310 EHBP1L1Q8N3D4 1523 aa18.3■□□□□ 0.52
RET-205ENST00000615310 MRC2Q9UBG0 1479 aa18.29■□□□□ 0.52
RET-205ENST00000615310 C11orf95C9JLR9 678 aaPredicted RBP18.29■□□□□ 0.52
RET-205ENST00000615310 TCERG1O14776 1098 aaKnown RBP18.29■□□□□ 0.52
RET-205ENST00000615310 EIF3AQ14152 1382 aaKnown RBP18.29■□□□□ 0.52
RET-205ENST00000615310 MIA2Q96PC5 1412 aa18.29■□□□□ 0.52
RET-205ENST00000615310 SNAPC4Q5SXM2 1469 aa18.28■□□□□ 0.52
RET-205ENST00000615310 EPRSP07814 1512 aaKnown RBP18.28■□□□□ 0.52
RET-205ENST00000615310 RRP1P56182 461 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms