RNA–Protein interactions for RNA: ENST00000614090.1

PTPN20CP-201, Transcript of protein tyrosine phosphatase, non-receptor type 20C, pseudogene, humanhuman

BASIC

Gene PTPN20CP, Length 920 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20CP-201ENST00000614090 HECW1Q76N89 1606 aa21.79■■□□□ 1.08
PTPN20CP-201ENST00000614090 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.78■■□□□ 1.08
PTPN20CP-201ENST00000614090 HNRNPUL2Q1KMD3 747 aaKnown RBP21.78■■□□□ 1.08
PTPN20CP-201ENST00000614090 MLECQ14165 292 aa21.77■■□□□ 1.08
PTPN20CP-201ENST00000614090 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.75■■□□□ 1.07
PTPN20CP-201ENST00000614090 IQSEC2Q5JU85 1478 aa21.73■■□□□ 1.07
PTPN20CP-201ENST00000614090 UHRF1BP1Q6BDS2 1440 aa21.72■■□□□ 1.07
PTPN20CP-201ENST00000614090 PTPRTO14522 1441 aa21.72■■□□□ 1.07
PTPN20CP-201ENST00000614090 C9orf84Q5VXU9 1444 aa21.7■■□□□ 1.06
PTPN20CP-201ENST00000614090 LTBP4Q8N2S1 1624 aa21.69■■□□□ 1.06
PTPN20CP-201ENST00000614090 ATP10AO60312 1499 aa21.69■■□□□ 1.06
PTPN20CP-201ENST00000614090 PLEKHD1A6NEE1 506 aa21.67■■□□□ 1.06
PTPN20CP-201ENST00000614090 CEBPAP49715 358 aaPredicted RBP21.65■■□□□ 1.06
PTPN20CP-201ENST00000614090 SCAPERQ9BY12 1400 aa21.63■■□□□ 1.05
PTPN20CP-201ENST00000614090 C3P01024 1663 aa21.61■■□□□ 1.05
PTPN20CP-201ENST00000614090 PLCH2O75038 1416 aa21.58■■□□□ 1.05
PTPN20CP-201ENST00000614090 MYO5CQ9NQX4 1742 aa21.57■■□□□ 1.04
PTPN20CP-201ENST00000614090 NCOA1Q15788 1441 aa21.55■■□□□ 1.04
PTPN20CP-201ENST00000614090 REREQ9P2R6 1566 aa21.54■■□□□ 1.04
PTPN20CP-201ENST00000614090 KDM5CP41229 1560 aa21.53■■□□□ 1.04
PTPN20CP-201ENST00000614090 ZNF518AQ6AHZ1 1483 aa21.52■■□□□ 1.04
PTPN20CP-201ENST00000614090 DIP2CQ9Y2E4 1556 aa21.51■■□□□ 1.03
PTPN20CP-201ENST00000614090 CDK13Q14004 1512 aaKnown RBP21.49■■□□□ 1.03
PTPN20CP-201ENST00000614090 TRAPPC8Q9Y2L5 1435 aa21.48■■□□□ 1.03
PTPN20CP-201ENST00000614090 AGLP35573 1532 aa21.45■■□□□ 1.02
PTPN20CP-201ENST00000614090 ABCA6Q8N139 1617 aa21.45■■□□□ 1.02
PTPN20CP-201ENST00000614090 EFCAB2Q5VUJ9 269 aa21.45■■□□□ 1.02
PTPN20CP-201ENST00000614090 CAMSAP1Q5T5Y3 1602 aa21.44■■□□□ 1.02
PTPN20CP-201ENST00000614090 UBAP1LF5GYI3 381 aa21.43■■□□□ 1.02
PTPN20CP-201ENST00000614090 MED1Q15648 1581 aaPredicted RBP21.43■■□□□ 1.02
PTPN20CP-201ENST00000614090 CNTLNQ9NXG0 1405 aa21.4■■□□□ 1.02
PTPN20CP-201ENST00000614090 MROH2AA6NES4 1674 aa21.4■■□□□ 1.02
PTPN20CP-201ENST00000614090 ESF1Q9H501 851 aaKnown RBP21.39■■□□□ 1.01
PTPN20CP-201ENST00000614090 MLH3Q9UHC1 1453 aa21.39■■□□□ 1.01
PTPN20CP-201ENST00000614090 KIF14Q15058 1648 aa21.38■■□□□ 1.01
PTPN20CP-201ENST00000614090 RANGAP1P46060 587 aaPredicted RBP21.38■■□□□ 1.01
PTPN20CP-201ENST00000614090 ARHGAP5Q13017 1502 aa21.38■■□□□ 1.01
PTPN20CP-201ENST00000614090 ZNF335Q9H4Z2 1342 aaPredicted RBP21.37■■□□□ 1.01
PTPN20CP-201ENST00000614090 AFAP1Q8N556 730 aa21.37■■□□□ 1.01
PTPN20CP-201ENST00000614090 CSRNP3Q8WYN3 585 aa21.37■■□□□ 1.01
PTPN20CP-201ENST00000614090 NPATQ14207 1427 aa21.37■■□□□ 1.01
PTPN20CP-201ENST00000614090 ZNF142P52746 1687 aaPredicted RBP21.36■■□□□ 1.01
PTPN20CP-201ENST00000614090 SUPT6HQ7KZ85 1726 aaKnown RBP21.35■■□□□ 1.01
PTPN20CP-201ENST00000614090 MYT1LQ9UL68 1186 aa21.34■■□□□ 1.01
PTPN20CP-201ENST00000614090 PLA2R1Q13018 1463 aa21.32■■□□□ 1
PTPN20CP-201ENST00000614090 CDC42BPBQ9Y5S2 1711 aa21.32■■□□□ 1
PTPN20CP-201ENST00000614090 KIDINS220Q9ULH0 1771 aa21.31■■□□□ 1
PTPN20CP-201ENST00000614090 MYO3AQ8NEV4 1616 aa21.3■■□□□ 1
PTPN20CP-201ENST00000614090 ITSN2Q9NZM3 1697 aa21.3■■□□□ 1
PTPN20CP-201ENST00000614090 ABCC1P33527 1531 aa21.29■■□□□ 1
PTPN20CP-201ENST00000614090 NCKAP5LQ9HCH0 1330 aa21.29■■□□□ 1
PTPN20CP-201ENST00000614090 TCOF1Q13428 1488 aaKnown RBP21.28■■□□□ 1
PTPN20CP-201ENST00000614090 PKD2Q13563 968 aa21.27■■□□□ 1
PTPN20CP-201ENST00000614090 TROQ12816 1431 aaPredicted RBP21.27■■□□□ 1
PTPN20CP-201ENST00000614090 PREX2Q70Z35 1606 aa21.26■□□□□ 0.99
PTPN20CP-201ENST00000614090 CDK11AQ9UQ88 783 aaPredicted RBP21.26■□□□□ 0.99
PTPN20CP-201ENST00000614090 CEP170BQ9Y4F5 1589 aaPredicted RBP21.26■□□□□ 0.99
PTPN20CP-201ENST00000614090 HSPA1LP34931 641 aa21.25■□□□□ 0.99
PTPN20CP-201ENST00000614090 CLIP1P30622 1438 aa21.24■□□□□ 0.99
PTPN20CP-201ENST00000614090 EEA1Q15075 1411 aa21.23■□□□□ 0.99
PTPN20CP-201ENST00000614090 FMN1Q68DA7 1419 aa21.22■□□□□ 0.99
PTPN20CP-201ENST00000614090 ZMYM3Q14202 1370 aa21.22■□□□□ 0.99
PTPN20CP-201ENST00000614090 CLTCQ00610 1675 aaKnown RBP21.21■□□□□ 0.99
PTPN20CP-201ENST00000614090 LRRIQ1Q96JM4 1722 aa21.19■□□□□ 0.98
PTPN20CP-201ENST00000614090 SCAF1Q9H7N4 1312 aaKnown RBP21.19■□□□□ 0.98
PTPN20CP-201ENST00000614090 CPS1P31327 1500 aa21.19■□□□□ 0.98
PTPN20CP-201ENST00000614090 PPP6R1Q9UPN7 881 aa21.18■□□□□ 0.98
PTPN20CP-201ENST00000614090 PHF23Q9BUL5 403 aaPredicted RBP21.17■□□□□ 0.98
PTPN20CP-201ENST00000614090 POLR1AO95602 1720 aaPredicted RBP21.17■□□□□ 0.98
PTPN20CP-201ENST00000614090 TOM1O60784 492 aa21.16■□□□□ 0.98
PTPN20CP-201ENST00000614090 PIP4K2BP78356 416 aa21.16■□□□□ 0.98
PTPN20CP-201ENST00000614090 ATP1B4Q9UN42 357 aaPredicted RBP21.16■□□□□ 0.98
PTPN20CP-201ENST00000614090 PTPRKQ15262 1439 aa21.15■□□□□ 0.98
PTPN20CP-201ENST00000614090 SAMD9LQ8IVG5 1584 aa21.14■□□□□ 0.98
PTPN20CP-201ENST00000614090 CDC42BPAQ5VT25 1732 aa21.13■□□□□ 0.97
PTPN20CP-201ENST00000614090 PLXNC1O60486 1568 aa21.12■□□□□ 0.97
PTPN20CP-201ENST00000614090 DNMT1P26358 1616 aaKnown RBP21.11■□□□□ 0.97
PTPN20CP-201ENST00000614090 A2ML1A8K2U0 1454 aa21.1■□□□□ 0.97
PTPN20CP-201ENST00000614090 NEURL4Q96JN8 1562 aa21.1■□□□□ 0.97
PTPN20CP-201ENST00000614090 SHANK2Q9UPX8 1470 aa21.09■□□□□ 0.97
PTPN20CP-201ENST00000614090 ARHGAP35Q9NRY4 1499 aa21.08■□□□□ 0.97
PTPN20CP-201ENST00000614090 ALKQ9UM73 1620 aa21.07■□□□□ 0.96
PTPN20CP-201ENST00000614090 ATP7AQ04656 1500 aa21.06■□□□□ 0.96
PTPN20CP-201ENST00000614090 SYCP2Q9BX26 1530 aa21.05■□□□□ 0.96
PTPN20CP-201ENST00000614090 INO80Q9ULG1 1556 aaPredicted RBP21.05■□□□□ 0.96
PTPN20CP-201ENST00000614090 VWDEQ8N2E2 1590 aa21.02■□□□□ 0.96
PTPN20CP-201ENST00000614090 A2MP01023 1474 aa21.02■□□□□ 0.96
PTPN20CP-201ENST00000614090 SPAG9O60271 1321 aaKnown RBP21.02■□□□□ 0.95
PTPN20CP-201ENST00000614090 CCDC18Q5T9S5 1454 aa21■□□□□ 0.95
PTPN20CP-201ENST00000614090 ADGBQ8N7X0 1667 aa20.99■□□□□ 0.95
PTPN20CP-201ENST00000614090 RNF17Q9BXT8 1623 aaKnown RBP20.96■□□□□ 0.95
PTPN20CP-201ENST00000614090 GGT6Q6P531 493 aa20.95■□□□□ 0.94
PTPN20CP-201ENST00000614090 DEPDC5O75140 1603 aa20.95■□□□□ 0.94
PTPN20CP-201ENST00000614090 SYNMO15061 1565 aa20.93■□□□□ 0.94
PTPN20CP-201ENST00000614090 KIAA1107Q9UPP5 1409 aa20.93■□□□□ 0.94
PTPN20CP-201ENST00000614090 PLEKHH2Q8IVE3 1493 aa20.93■□□□□ 0.94
PTPN20CP-201ENST00000614090 ZNF777Q9ULD5 760 aaPredicted RBP20.92■□□□□ 0.94
PTPN20CP-201ENST00000614090 MED14O60244 1454 aa20.92■□□□□ 0.94
PTPN20CP-201ENST00000614090 STRCP1A6NGW2 1772 aa20.92■□□□□ 0.94
PTPN20CP-201ENST00000614090 IQGAP1P46940 1657 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms