RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 UHRF1BP1LA0JNW5 1464 aa15.92■□□□□ 0.14
ATF3-211ENST00000613954 OSCARQ8IYS5 282 aa15.91■□□□□ 0.14
ATF3-211ENST00000613954 TSHZ2Q9NRE2 1034 aa15.9■□□□□ 0.14
ATF3-211ENST00000613954 GPATCH8Q9UKJ3 1502 aaKnown RBP15.9■□□□□ 0.14
ATF3-211ENST00000613954 HFM1A2PYH4 1435 aa15.9■□□□□ 0.14
ATF3-211ENST00000613954 ABCC10Q5T3U5 1492 aa15.89■□□□□ 0.13
ATF3-211ENST00000613954 CFDP1Q9UEE9 299 aaPredicted RBP15.87■□□□□ 0.13
ATF3-211ENST00000613954 DNMT1P26358 1616 aaKnown RBP15.85■□□□□ 0.13
ATF3-211ENST00000613954 AKNAQ7Z591 1439 aa15.85■□□□□ 0.13
ATF3-211ENST00000613954 KDM5BQ9UGL1 1544 aa15.85■□□□□ 0.13
ATF3-211ENST00000613954 CAMSAP2Q08AD1 1489 aa15.85■□□□□ 0.13
ATF3-211ENST00000613954 NAIPQ13075 1403 aa15.85■□□□□ 0.13
ATF3-211ENST00000613954 CDC42BPAQ5VT25 1732 aa15.85■□□□□ 0.13
ATF3-211ENST00000613954 DAPK1P53355 1430 aa15.84■□□□□ 0.13
ATF3-211ENST00000613954 ZCCHC11Q5TAX3 1644 aaKnown RBP15.84■□□□□ 0.13
ATF3-211ENST00000613954 ZNF644Q9H582 1327 aaPredicted RBP15.83■□□□□ 0.12
ATF3-211ENST00000613954 GCC2Q8IWJ2 1684 aa15.82■□□□□ 0.12
ATF3-211ENST00000613954 ABCC5O15440 1437 aa15.82■□□□□ 0.12
ATF3-211ENST00000613954 ANP32EQ9BTT0 268 aa15.82■□□□□ 0.12
ATF3-211ENST00000613954 ROCK1Q13464 1354 aa15.8■□□□□ 0.12
ATF3-211ENST00000613954 CCER2I3L3R5 266 aa15.8■□□□□ 0.12
ATF3-211ENST00000613954 CHIC2Q9UKJ5 165 aa15.8■□□□□ 0.12
ATF3-211ENST00000613954 ZNF777Q9ULD5 760 aaPredicted RBP15.78■□□□□ 0.12
ATF3-211ENST00000613954 PREX2Q70Z35 1606 aa15.78■□□□□ 0.12
ATF3-211ENST00000613954 PPP1R15AO75807 674 aaPredicted RBP15.78■□□□□ 0.12
ATF3-211ENST00000613954 DDX10Q13206 875 aaKnown RBP15.78■□□□□ 0.12
ATF3-211ENST00000613954 KCNH8Q96L42 1107 aa15.78■□□□□ 0.12
ATF3-211ENST00000613954 RRP7BPQ9NSQ0 103 aa15.78■□□□□ 0.12
ATF3-211ENST00000613954 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.77■□□□□ 0.121e-6■■■■□ 23.9
ATF3-211ENST00000613954 TTC37Q6PGP7 1564 aa15.77■□□□□ 0.11
ATF3-211ENST00000613954 NEFLP07196 543 aa15.76■□□□□ 0.11
ATF3-211ENST00000613954 CROCC2H7BZ55 1655 aa15.76■□□□□ 0.11
ATF3-211ENST00000613954 CDC42BPBQ9Y5S2 1711 aa15.75■□□□□ 0.11
ATF3-211ENST00000613954 FKBP8Q14318 412 aa15.74■□□□□ 0.11
ATF3-211ENST00000613954 ADGBQ8N7X0 1667 aa15.74■□□□□ 0.11
ATF3-211ENST00000613954 SIN3AQ96ST3 1273 aa15.73■□□□□ 0.11
ATF3-211ENST00000613954 ANP32CO43423 234 aa15.73■□□□□ 0.11
ATF3-211ENST00000613954 MYO5CQ9NQX4 1742 aa15.73■□□□□ 0.11
ATF3-211ENST00000613954 ADGRL2O95490 1459 aa15.72■□□□□ 0.11
ATF3-211ENST00000613954 SHANK2Q9UPX8 1470 aa15.72■□□□□ 0.11
ATF3-211ENST00000613954 ARHGEF5Q12774 1597 aa15.72■□□□□ 0.11
ATF3-211ENST00000613954 SAMD9LQ8IVG5 1584 aa15.71■□□□□ 0.11
ATF3-211ENST00000613954 ARHGAP5Q13017 1502 aa15.71■□□□□ 0.11
ATF3-211ENST00000613954 KDM6BO15054 1643 aa15.7■□□□□ 0.1
ATF3-211ENST00000613954 WDR7Q9Y4E6 1490 aa15.7■□□□□ 0.1
ATF3-211ENST00000613954 NCOA1Q15788 1441 aa15.7■□□□□ 0.1
ATF3-211ENST00000613954 ANKRD30AQ9BXX3 1397 aa15.69■□□□□ 0.1
ATF3-211ENST00000613954 MBD5Q9P267 1494 aa15.69■□□□□ 0.1
ATF3-211ENST00000613954 PLEKHH2Q8IVE3 1493 aa15.68■□□□□ 0.1
ATF3-211ENST00000613954 PLCH2O75038 1416 aa15.68■□□□□ 0.1
ATF3-211ENST00000613954 C9orf84Q5VXU9 1444 aa15.67■□□□□ 0.1
ATF3-211ENST00000613954 RSPH4AQ5TD94 716 aa15.67■□□□□ 0.1
ATF3-211ENST00000613954 BCANQ96GW7 911 aa15.67■□□□□ 0.1
ATF3-211ENST00000613954 CCDC141Q6ZP82 1450 aa15.66■□□□□ 0.1
ATF3-211ENST00000613954 HNRNPMP52272 730 aaKnown RBP eCLIP15.66■□□□□ 0.1
ATF3-211ENST00000613954 TONSLQ96HA7 1378 aa15.65■□□□□ 0.1
ATF3-211ENST00000613954 TSPY4P0CV99 314 aa15.65■□□□□ 0.1
ATF3-211ENST00000613954 TSPY10P0CW01 314 aa15.65■□□□□ 0.1
ATF3-211ENST00000613954 ARAP3Q8WWN8 1544 aa15.65■□□□□ 0.1
ATF3-211ENST00000613954 KIAA1107Q9UPP5 1409 aa15.65■□□□□ 0.1
ATF3-211ENST00000613954 TRIM52Q96A61 297 aa15.65■□□□□ 0.1
ATF3-211ENST00000613954 ASXL2Q76L83 1435 aa15.64■□□□□ 0.09
ATF3-211ENST00000613954 NPM1P06748 294 aaKnown RBP eCLIP15.64■□□□□ 0.09
ATF3-211ENST00000613954 SYCP2Q9BX26 1530 aa15.64■□□□□ 0.09
ATF3-211ENST00000613954 EFCAB2Q5VUJ9 269 aa15.63■□□□□ 0.09
ATF3-211ENST00000613954 ABCA9Q8IUA7 1624 aa15.62■□□□□ 0.09
ATF3-211ENST00000613954 MAST1Q9Y2H9 1570 aa15.61■□□□□ 0.09
ATF3-211ENST00000613954 ANKRD50Q9ULJ7 1429 aa15.59■□□□□ 0.09
ATF3-211ENST00000613954 MPHOSPH9Q99550 1183 aa15.59■□□□□ 0.09
ATF3-211ENST00000613954 RBM19Q9Y4C8 960 aaKnown RBP15.59■□□□□ 0.09
ATF3-211ENST00000613954 DENND4BO75064 1496 aaPredicted RBP15.59■□□□□ 0.09
ATF3-211ENST00000613954 ABCC1P33527 1531 aa15.59■□□□□ 0.09
ATF3-211ENST00000613954 KIF15Q9NS87 1388 aa15.58■□□□□ 0.08
ATF3-211ENST00000613954 ARHGEF12Q9NZN5 1544 aa15.57■□□□□ 0.08
ATF3-211ENST00000613954 RIMBP3CA6NJZ7 1639 aa15.55■□□□□ 0.08
ATF3-211ENST00000613954 RIMBP3BA6NNM3 1639 aa15.55■□□□□ 0.08
ATF3-211ENST00000613954 RIMBP3Q9UFD9 1639 aa15.55■□□□□ 0.08
ATF3-211ENST00000613954 PLXNC1O60486 1568 aa15.55■□□□□ 0.08
ATF3-211ENST00000613954 HIRIP3Q9BW71 556 aaPredicted RBP15.55■□□□□ 0.08
ATF3-211ENST00000613954 PZPP20742 1482 aa15.54■□□□□ 0.08
ATF3-211ENST00000613954 FANCAO15360 1455 aa15.53■□□□□ 0.08
ATF3-211ENST00000613954 SLC4A1APQ9BWU0 796 aaKnown RBP15.53■□□□□ 0.08
ATF3-211ENST00000613954 TRAPPC8Q9Y2L5 1435 aa15.51■□□□□ 0.07
ATF3-211ENST00000613954 KDM5DQ9BY66 1539 aa15.51■□□□□ 0.07
ATF3-211ENST00000613954 ERICH6BQ5W0A0 696 aa15.51■□□□□ 0.07
ATF3-211ENST00000613954 ANKRD30BQ9BXX2 1392 aa15.49■□□□□ 0.07
ATF3-211ENST00000613954 CYB5RLQ6IPT4 315 aa15.49■□□□□ 0.07
ATF3-211ENST00000613954 DUOX2Q9NRD8 1548 aa15.48■□□□□ 0.07
ATF3-211ENST00000613954 RTEL1-TNFRSF6BF6WH68 1400 aa15.48■□□□□ 0.07
ATF3-211ENST00000613954 NUP155O75694 1391 aa15.48■□□□□ 0.07
ATF3-211ENST00000613954 ADGRL1O94910 1474 aa15.47■□□□□ 0.07
ATF3-211ENST00000613954 CD109Q6YHK3 1445 aa15.47■□□□□ 0.07
ATF3-211ENST00000613954 CFAP74Q9C0B2 1584 aa15.47■□□□□ 0.07
ATF3-211ENST00000613954 FOXD1Q16676 465 aa15.46■□□□□ 0.07
ATF3-211ENST00000613954 SPAG9O60271 1321 aaKnown RBP15.46■□□□□ 0.07
ATF3-211ENST00000613954 FANCIQ9NVI1 1328 aa15.46■□□□□ 0.06
ATF3-211ENST00000613954 ERBINQ96RT1 1412 aa15.45■□□□□ 0.06
ATF3-211ENST00000613954 SCAPERQ9BY12 1400 aa15.45■□□□□ 0.06
ATF3-211ENST00000613954 HNRNPUQ00839 825 aaKnown RBP eCLIP15.45■□□□□ 0.06
ATF3-211ENST00000613954 ZFYVE16Q7Z3T8 1539 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms