RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 FOXD1Q16676 465 aa22.34■■□□□ 1.17
TSKU-205ENST00000612930 UGGT2Q9NYU1 1516 aa22.32■■□□□ 1.16
TSKU-205ENST00000612930 DHX29Q7Z478 1369 aaKnown RBP22.32■■□□□ 1.16
TSKU-205ENST00000612930 GRIN2BQ13224 1484 aa22.31■■□□□ 1.16
TSKU-205ENST00000612930 EHBP1L1Q8N3D4 1523 aa22.3■■□□□ 1.16
TSKU-205ENST00000612930 ARHGEF11O15085 1522 aa22.3■■□□□ 1.16
TSKU-205ENST00000612930 CADPSQ9ULU8 1353 aa22.3■■□□□ 1.16
TSKU-205ENST00000612930 SENP3-EIF4A1A0A087X0R7 540 aa22.29■■□□□ 1.16
TSKU-205ENST00000612930 NPM2Q86SE8 214 aaKnown RBP22.29■■□□□ 1.16
TSKU-205ENST00000612930 TCOF1Q13428 1488 aaKnown RBP22.29■■□□□ 1.16
TSKU-205ENST00000612930 TEX14Q8IWB6 1497 aa22.29■■□□□ 1.16
TSKU-205ENST00000612930 LAS1LQ9Y4W2 734 aaKnown RBP22.28■■□□□ 1.16
TSKU-205ENST00000612930 NEFMP07197 916 aa22.27■■□□□ 1.16
TSKU-205ENST00000612930 CC2D2AQ9P2K1 1620 aa22.27■■□□□ 1.16
TSKU-205ENST00000612930 RAD54L2Q9Y4B4 1467 aa22.27■■□□□ 1.16
TSKU-205ENST00000612930 RPRD2Q5VT52 1461 aaKnown RBP22.26■■□□□ 1.15
TSKU-205ENST00000612930 CNGB1Q14028 1251 aaPredicted RBP22.26■■□□□ 1.15
TSKU-205ENST00000612930 USP35Q9P2H5 1018 aa22.26■■□□□ 1.15
TSKU-205ENST00000612930 CUL7Q14999 1698 aa22.26■■□□□ 1.15
TSKU-205ENST00000612930 MAGI3Q5TCQ9 1506 aa22.26■■□□□ 1.15
TSKU-205ENST00000612930 WASHC2CQ9Y4E1 1318 aa22.25■■□□□ 1.15
TSKU-205ENST00000612930 SAMD9Q5K651 1589 aa22.25■■□□□ 1.15
TSKU-205ENST00000612930 ANKRD30BQ9BXX2 1392 aa22.25■■□□□ 1.15
TSKU-205ENST00000612930 ABCA10Q8WWZ4 1543 aa22.24■■□□□ 1.15
TSKU-205ENST00000612930 THOC2Q8NI27 1593 aaKnown RBP22.24■■□□□ 1.15
TSKU-205ENST00000612930 TCERG1O14776 1098 aaKnown RBP22.22■■□□□ 1.15
TSKU-205ENST00000612930 PDE4AP27815 886 aa22.22■■□□□ 1.15
TSKU-205ENST00000612930 PNISRQ8TF01 805 aaKnown RBP22.22■■□□□ 1.15
TSKU-205ENST00000612930 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.21■■□□□ 1.15
TSKU-205ENST00000612930 EXOC6Q8TAG9 804 aa22.19■■□□□ 1.14
TSKU-205ENST00000612930 BCORL1Q5H9F3 1711 aa22.18■■□□□ 1.14
TSKU-205ENST00000612930 BACH2Q9BYV9 841 aa22.18■■□□□ 1.14
TSKU-205ENST00000612930 MIA2Q96PC5 1412 aa22.17■■□□□ 1.14
TSKU-205ENST00000612930 RRP1P56182 461 aaKnown RBP22.16■■□□□ 1.14
TSKU-205ENST00000612930 PPM1GO15355 546 aaPredicted RBP22.15■■□□□ 1.14
TSKU-205ENST00000612930 POLA1P09884 1462 aaPredicted RBP22.15■■□□□ 1.14
TSKU-205ENST00000612930 POLR3GLQ9BT43 218 aa22.13■■□□□ 1.13
TSKU-205ENST00000612930 DNMBPQ6XZF7 1577 aa22.12■■□□□ 1.13
TSKU-205ENST00000612930 MS4A1P11836 297 aa22.12■■□□□ 1.13
TSKU-205ENST00000612930 FANCD2Q9BXW9 1451 aa22.11■■□□□ 1.13
TSKU-205ENST00000612930 TMC1Q8TDI8 760 aa22.11■■□□□ 1.13
TSKU-205ENST00000612930 LRPPRCP42704 1394 aaKnown RBP22.1■■□□□ 1.13
TSKU-205ENST00000612930 BRPF3Q9ULD4 1205 aa22.09■■□□□ 1.13
TSKU-205ENST00000612930 USP47Q96K76 1375 aa22.08■■□□□ 1.13
TSKU-205ENST00000612930 TOPBP1Q92547 1522 aa22.07■■□□□ 1.12
TSKU-205ENST00000612930 RCAN3Q9UKA8 241 aa22.06■■□□□ 1.12
TSKU-205ENST00000612930 MBD5Q9P267 1494 aa22.05■■□□□ 1.12
TSKU-205ENST00000612930 SLC4A1APQ9BWU0 796 aaKnown RBP22.05■■□□□ 1.12
TSKU-205ENST00000612930 GSE1Q14687 1217 aa22.03■■□□□ 1.12
TSKU-205ENST00000612930 KIF21AQ7Z4S6 1674 aa22.03■■□□□ 1.12
TSKU-205ENST00000612930 ARID4BQ4LE39 1312 aaPredicted RBP22.03■■□□□ 1.12
TSKU-205ENST00000612930 KDM5CP41229 1560 aa22.03■■□□□ 1.12
TSKU-205ENST00000612930 ROCK1Q13464 1354 aa22.02■■□□□ 1.12
TSKU-205ENST00000612930 UBE2Q2Q8WVN8 375 aa22.02■■□□□ 1.11
TSKU-205ENST00000612930 DAPK1P53355 1430 aa22■■□□□ 1.11
TSKU-205ENST00000612930 BRD4O60885 1362 aaPredicted RBP21.99■■□□□ 1.11
TSKU-205ENST00000612930 NFKBIBQ15653 356 aa21.99■■□□□ 1.11
TSKU-205ENST00000612930 DDRGK1Q96HY6 314 aa21.99■■□□□ 1.11
TSKU-205ENST00000612930 KIF15Q9NS87 1388 aa21.98■■□□□ 1.11
TSKU-205ENST00000612930 SKAP1Q86WV1 359 aa21.98■■□□□ 1.11
TSKU-205ENST00000612930 ROCK2O75116 1388 aaKnown RBP21.98■■□□□ 1.11
TSKU-205ENST00000612930 EPRSP07814 1512 aaKnown RBP21.98■■□□□ 1.11
TSKU-205ENST00000612930 ZNF326Q5BKZ1 582 aaKnown RBP21.97■■□□□ 1.11
TSKU-205ENST00000612930 KIF14Q15058 1648 aa21.97■■□□□ 1.11
TSKU-205ENST00000612930 NESP48681 1621 aa21.96■■□□□ 1.11
TSKU-205ENST00000612930 ABCC5O15440 1437 aa21.96■■□□□ 1.11
TSKU-205ENST00000612930 MYBBP1AQ9BQG0 1328 aaKnown RBP21.96■■□□□ 1.11
TSKU-205ENST00000612930 PZPP20742 1482 aa21.96■■□□□ 1.11
TSKU-205ENST00000612930 CDK13Q14004 1512 aaKnown RBP21.95■■□□□ 1.1
TSKU-205ENST00000612930 FRAT1Q92837 279 aaPredicted RBP21.95■■□□□ 1.1
TSKU-205ENST00000612930 DNMT1P26358 1616 aaKnown RBP21.94■■□□□ 1.1
TSKU-205ENST00000612930 SLC4A3P48751 1232 aa21.92■■□□□ 1.1
TSKU-205ENST00000612930 PDE3BQ13370 1112 aa21.91■■□□□ 1.1
TSKU-205ENST00000612930 RALBP1Q15311 655 aa21.91■■□□□ 1.1
TSKU-205ENST00000612930 TDRD9Q8NDG6 1382 aaKnown RBP21.9■■□□□ 1.1
TSKU-205ENST00000612930 PLIN1O60240 522 aa21.9■■□□□ 1.1
TSKU-205ENST00000612930 CDCA7LQ96GN5 454 aa21.9■■□□□ 1.1
TSKU-205ENST00000612930 KTN1Q86UP2 1357 aaKnown RBP21.9■■□□□ 1.1
TSKU-205ENST00000612930 ZNF644Q9H582 1327 aaPredicted RBP21.89■■□□□ 1.09
TSKU-205ENST00000612930 LAMC3Q9Y6N6 1575 aa21.87■■□□□ 1.09
TSKU-205ENST00000612930 CRBNQ96SW2 442 aa21.87■■□□□ 1.09
TSKU-205ENST00000612930 ARID3CA6NKF2 412 aa21.87■■□□□ 1.09
TSKU-205ENST00000612930 KIAA1107Q9UPP5 1409 aa21.86■■□□□ 1.09
TSKU-205ENST00000612930 E9PCH4 1651 aa21.86■■□□□ 1.09
TSKU-205ENST00000612930 GAPVD1Q14C86 1478 aa21.85■■□□□ 1.09
TSKU-205ENST00000612930 RALGAPBQ86X10 1494 aa21.85■■□□□ 1.09
TSKU-205ENST00000612930 UHRF1BP1Q6BDS2 1440 aa21.84■■□□□ 1.09
TSKU-205ENST00000612930 EIF5BO60841 1220 aaKnown RBP21.83■■□□□ 1.09
TSKU-205ENST00000612930 WDR62O43379 1518 aa21.83■■□□□ 1.09
TSKU-205ENST00000612930 CARD11Q9BXL7 1154 aa21.83■■□□□ 1.08
TSKU-205ENST00000612930 ST20-MTHFSA0A0A6YYL1 179 aa21.81■■□□□ 1.08
TSKU-205ENST00000612930 NLRP13Q86W25 1043 aa21.81■■□□□ 1.08
TSKU-205ENST00000612930 KDM2BQ8NHM5 1336 aa21.8■■□□□ 1.08
TSKU-205ENST00000612930 PKD2Q13563 968 aa21.79■■□□□ 1.08
TSKU-205ENST00000612930 PARD3Q8TEW0 1356 aa21.78■■□□□ 1.08
TSKU-205ENST00000612930 URB2Q14146 1524 aaKnown RBP21.78■■□□□ 1.08
TSKU-205ENST00000612930 DAXXQ9UER7 740 aaPredicted RBP21.77■■□□□ 1.08
TSKU-205ENST00000612930 FRAT2O75474 233 aaPredicted RBP21.77■■□□□ 1.08
TSKU-205ENST00000612930 C20orf194Q5TEA3 1177 aa21.76■■□□□ 1.07
TSKU-205ENST00000612930 C8orf34Q49A92 452 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms