RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-204ENST00000612688 FKBP8Q14318 412 aa16.74■□□□□ 0.27
PPP4R3B-204ENST00000612688 SHROOM2Q13796 1616 aa16.73■□□□□ 0.27
PPP4R3B-204ENST00000612688 KIF14Q15058 1648 aa16.71■□□□□ 0.27
PPP4R3B-204ENST00000612688 CLSPNQ9HAW4 1339 aa16.7■□□□□ 0.26
PPP4R3B-204ENST00000612688 SETD5Q9C0A6 1442 aa16.7■□□□□ 0.26
PPP4R3B-204ENST00000612688 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
PPP4R3B-204ENST00000612688 CYB5RLQ6IPT4 315 aa16.7■□□□□ 0.26
PPP4R3B-204ENST00000612688 PTPN23Q9H3S7 1636 aa16.69■□□□□ 0.26
PPP4R3B-204ENST00000612688 TRIM52Q96A61 297 aa16.68■□□□□ 0.26
PPP4R3B-204ENST00000612688 HNRNPMP52272 730 aaKnown RBP eCLIP16.68■□□□□ 0.26
PPP4R3B-204ENST00000612688 NPM1P06748 294 aaKnown RBP eCLIP16.65■□□□□ 0.26
PPP4R3B-204ENST00000612688 GPATCH8Q9UKJ3 1502 aaKnown RBP16.64■□□□□ 0.25
PPP4R3B-204ENST00000612688 ABCC2Q92887 1545 aa16.64■□□□□ 0.25
PPP4R3B-204ENST00000612688 RBM19Q9Y4C8 960 aaKnown RBP16.64■□□□□ 0.25
PPP4R3B-204ENST00000612688 MIA2Q96PC5 1412 aa16.61■□□□□ 0.25
PPP4R3B-204ENST00000612688 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.61■□□□□ 0.25
PPP4R3B-204ENST00000612688 ERICH6Q7L0X2 663 aa16.59■□□□□ 0.25
PPP4R3B-204ENST00000612688 CAMSAP2Q08AD1 1489 aa16.57■□□□□ 0.24
PPP4R3B-204ENST00000612688 TSPY4P0CV99 314 aa16.57■□□□□ 0.24
PPP4R3B-204ENST00000612688 TSPY10P0CW01 314 aa16.57■□□□□ 0.24
PPP4R3B-204ENST00000612688 FOXD1Q16676 465 aa16.57■□□□□ 0.24
PPP4R3B-204ENST00000612688 ABCC5O15440 1437 aa16.57■□□□□ 0.24
PPP4R3B-204ENST00000612688 NAIPQ13075 1403 aa16.57■□□□□ 0.24
PPP4R3B-204ENST00000612688 DAPK1P53355 1430 aa16.56■□□□□ 0.24
PPP4R3B-204ENST00000612688 MYT1LQ9UL68 1186 aa16.56■□□□□ 0.24
PPP4R3B-204ENST00000612688 TCOF1Q13428 1488 aaKnown RBP16.55■□□□□ 0.24
PPP4R3B-204ENST00000612688 ABCC10Q5T3U5 1492 aa16.55■□□□□ 0.24
PPP4R3B-204ENST00000612688 ZCCHC11Q5TAX3 1644 aaKnown RBP16.54■□□□□ 0.24
PPP4R3B-204ENST00000612688 HFM1A2PYH4 1435 aa16.53■□□□□ 0.24
PPP4R3B-204ENST00000612688 ADCY10Q96PN6 1610 aa16.53■□□□□ 0.24
PPP4R3B-204ENST00000612688 ARHGAP5Q13017 1502 aa16.52■□□□□ 0.23
PPP4R3B-204ENST00000612688 NEFLP07196 543 aa16.52■□□□□ 0.23
PPP4R3B-204ENST00000612688 KDM5BQ9UGL1 1544 aa16.51■□□□□ 0.23
PPP4R3B-204ENST00000612688 MSH5O43196 834 aa16.51■□□□□ 0.23
PPP4R3B-204ENST00000612688 IRX6P78412 446 aaPredicted RBP16.5■□□□□ 0.23
PPP4R3B-204ENST00000612688 TTC37Q6PGP7 1564 aa16.5■□□□□ 0.23
PPP4R3B-204ENST00000612688 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.5■□□□□ 0.23
PPP4R3B-204ENST00000612688 CDC42BPAQ5VT25 1732 aa16.5■□□□□ 0.23
PPP4R3B-204ENST00000612688 EFCAB2Q5VUJ9 269 aa16.49■□□□□ 0.23
PPP4R3B-204ENST00000612688 UHRF1BP1LA0JNW5 1464 aa16.49■□□□□ 0.23
PPP4R3B-204ENST00000612688 ASXL2Q76L83 1435 aa16.48■□□□□ 0.23
PPP4R3B-204ENST00000612688 ITSN2Q9NZM3 1697 aa16.47■□□□□ 0.23
PPP4R3B-204ENST00000612688 AFAP1Q8N556 730 aa16.47■□□□□ 0.23
PPP4R3B-204ENST00000612688 KDM6BO15054 1643 aa16.47■□□□□ 0.23
PPP4R3B-204ENST00000612688 CNGB1Q14028 1251 aaPredicted RBP16.47■□□□□ 0.23
PPP4R3B-204ENST00000612688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.46■□□□□ 0.238e-10■□□□□ 10.4
PPP4R3B-204ENST00000612688 SLC4A1APQ9BWU0 796 aaKnown RBP16.46■□□□□ 0.23
PPP4R3B-204ENST00000612688 MPHOSPH9Q99550 1183 aa16.44■□□□□ 0.22
PPP4R3B-204ENST00000612688 WDR7Q9Y4E6 1490 aa16.44■□□□□ 0.22
PPP4R3B-204ENST00000612688 ANKRD30AQ9BXX3 1397 aa16.44■□□□□ 0.22
PPP4R3B-204ENST00000612688 MAPKBP1O60336 1514 aa16.44■□□□□ 0.22
PPP4R3B-204ENST00000612688 DNMT1P26358 1616 aaKnown RBP16.43■□□□□ 0.22
PPP4R3B-204ENST00000612688 AKNAQ7Z591 1439 aa16.43■□□□□ 0.22
PPP4R3B-204ENST00000612688 NCOA1Q15788 1441 aa16.43■□□□□ 0.22
PPP4R3B-204ENST00000612688 C9orf84Q5VXU9 1444 aa16.43■□□□□ 0.22
PPP4R3B-204ENST00000612688 CDC42BPBQ9Y5S2 1711 aa16.42■□□□□ 0.22
PPP4R3B-204ENST00000612688 SYCP2Q9BX26 1530 aa16.42■□□□□ 0.22
PPP4R3B-204ENST00000612688 SAMD9LQ8IVG5 1584 aa16.4■□□□□ 0.22
PPP4R3B-204ENST00000612688 PLCH2O75038 1416 aa16.4■□□□□ 0.22
PPP4R3B-204ENST00000612688 KIF15Q9NS87 1388 aa16.39■□□□□ 0.21
PPP4R3B-204ENST00000612688 SENP3-EIF4A1A0A087X0R7 540 aa16.38■□□□□ 0.21
PPP4R3B-204ENST00000612688 MBD5Q9P267 1494 aa16.38■□□□□ 0.21
PPP4R3B-204ENST00000612688 ROCK1Q13464 1354 aa16.38■□□□□ 0.21
PPP4R3B-204ENST00000612688 ANKRD50Q9ULJ7 1429 aa16.37■□□□□ 0.21
PPP4R3B-204ENST00000612688 ANP32CO43423 234 aa16.37■□□□□ 0.21
PPP4R3B-204ENST00000612688 ANO8Q9HCE9 1232 aaPredicted RBP16.37■□□□□ 0.21
PPP4R3B-204ENST00000612688 PREX2Q70Z35 1606 aa16.37■□□□□ 0.21
PPP4R3B-204ENST00000612688 NBR1Q14596 966 aa16.37■□□□□ 0.21
PPP4R3B-204ENST00000612688 TRAPPC8Q9Y2L5 1435 aa16.36■□□□□ 0.21
PPP4R3B-204ENST00000612688 ARHGEF12Q9NZN5 1544 aa16.36■□□□□ 0.21
PPP4R3B-204ENST00000612688 CCDC141Q6ZP82 1450 aa16.36■□□□□ 0.21
PPP4R3B-204ENST00000612688 MYO5CQ9NQX4 1742 aa16.35■□□□□ 0.21
PPP4R3B-204ENST00000612688 PPP1R15AO75807 674 aaPredicted RBP16.35■□□□□ 0.21
PPP4R3B-204ENST00000612688 RIMBP3CA6NJZ7 1639 aa16.35■□□□□ 0.21
PPP4R3B-204ENST00000612688 RIMBP3BA6NNM3 1639 aa16.35■□□□□ 0.21
PPP4R3B-204ENST00000612688 RIMBP3Q9UFD9 1639 aa16.35■□□□□ 0.21
PPP4R3B-204ENST00000612688 NUP155O75694 1391 aa16.35■□□□□ 0.21
PPP4R3B-204ENST00000612688 FAM69CQ0P6D2 419 aa16.35■□□□□ 0.21
PPP4R3B-204ENST00000612688 PKD2Q13563 968 aa16.35■□□□□ 0.21
PPP4R3B-204ENST00000612688 SPAG9O60271 1321 aaKnown RBP16.34■□□□□ 0.21
PPP4R3B-204ENST00000612688 FANCAO15360 1455 aa16.34■□□□□ 0.21
PPP4R3B-204ENST00000612688 TONSLQ96HA7 1378 aa16.33■□□□□ 0.21
PPP4R3B-204ENST00000612688 RSPH4AQ5TD94 716 aa16.33■□□□□ 0.21
PPP4R3B-204ENST00000612688 DEKP35659 375 aaKnown RBP16.32■□□□□ 0.2
PPP4R3B-204ENST00000612688 CD109Q6YHK3 1445 aa16.32■□□□□ 0.2
PPP4R3B-204ENST00000612688 SCAPERQ9BY12 1400 aa16.32■□□□□ 0.2
PPP4R3B-204ENST00000612688 RAPGEF3O95398 923 aa16.31■□□□□ 0.2
PPP4R3B-204ENST00000612688 GCC2Q8IWJ2 1684 aa16.3■□□□□ 0.2
PPP4R3B-204ENST00000612688 CCDC136Q96JN2 1154 aa16.3■□□□□ 0.2
PPP4R3B-204ENST00000612688 HNRNPUQ00839 825 aaKnown RBP eCLIP16.3■□□□□ 0.2
PPP4R3B-204ENST00000612688 ADGRL1O94910 1474 aa16.28■□□□□ 0.2
PPP4R3B-204ENST00000612688 ZNF326Q5BKZ1 582 aaKnown RBP16.28■□□□□ 0.2
PPP4R3B-204ENST00000612688 DENND4BO75064 1496 aaPredicted RBP16.27■□□□□ 0.2
PPP4R3B-204ENST00000612688 RTN4Q9NQC3 1192 aaKnown RBP16.27■□□□□ 0.19
PPP4R3B-204ENST00000612688 ADGRL2O95490 1459 aa16.26■□□□□ 0.19
PPP4R3B-204ENST00000612688 KIAA1107Q9UPP5 1409 aa16.26■□□□□ 0.19
PPP4R3B-204ENST00000612688 CROCC2H7BZ55 1655 aa16.25■□□□□ 0.19
PPP4R3B-204ENST00000612688 PLEKHH2Q8IVE3 1493 aa16.25■□□□□ 0.19
PPP4R3B-204ENST00000612688 KIF3BO15066 747 aa16.24■□□□□ 0.19
PPP4R3B-204ENST00000612688 ARHGEF5Q12774 1597 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms