RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 TRIM44Q96DX7 344 aaPredicted RBP14.12□□□□□ -0.15
CDC42EP3-206ENST00000611976 NUP155O75694 1391 aa14.12□□□□□ -0.15
CDC42EP3-206ENST00000611976 PDE3BQ13370 1112 aa14.12□□□□□ -0.15
CDC42EP3-206ENST00000611976 PRKRIP1Q9H875 184 aaPredicted RBP14.12□□□□□ -0.15
CDC42EP3-206ENST00000611976 FGD6Q6ZV73 1430 aa14.11□□□□□ -0.15
CDC42EP3-206ENST00000611976 UACAQ9BZF9 1416 aa14.11□□□□□ -0.15
CDC42EP3-206ENST00000611976 ARAP1Q96P48 1450 aa14.11□□□□□ -0.15
CDC42EP3-206ENST00000611976 PHLDB1Q86UU1 1377 aa14.1□□□□□ -0.15
CDC42EP3-206ENST00000611976 KIF15Q9NS87 1388 aa14.09□□□□□ -0.15
CDC42EP3-206ENST00000611976 FGD5Q6ZNL6 1462 aa14.09□□□□□ -0.15
CDC42EP3-206ENST00000611976 FRAT1Q92837 279 aaPredicted RBP14.09□□□□□ -0.15
CDC42EP3-206ENST00000611976 FANCD2Q9BXW9 1451 aa14.09□□□□□ -0.15
CDC42EP3-206ENST00000611976 ERCC6Q03468 1493 aa14.09□□□□□ -0.15
CDC42EP3-206ENST00000611976 MAPK8IP3Q9UPT6 1336 aa14.08□□□□□ -0.16
CDC42EP3-206ENST00000611976 NLRP13Q86W25 1043 aa14.08□□□□□ -0.16
CDC42EP3-206ENST00000611976 NEUROD2Q15784 382 aa14.08□□□□□ -0.16
CDC42EP3-206ENST00000611976 TOP2BQ02880 1626 aa14.08□□□□□ -0.16
CDC42EP3-206ENST00000611976 KANK1Q14678 1352 aa14.07□□□□□ -0.16
CDC42EP3-206ENST00000611976 ARID4BQ4LE39 1312 aaPredicted RBP14.07□□□□□ -0.16
CDC42EP3-206ENST00000611976 CHMP4BQ9H444 224 aaKnown RBP14.07□□□□□ -0.16
CDC42EP3-206ENST00000611976 PRXQ9BXM0 1461 aa14.07□□□□□ -0.16
CDC42EP3-206ENST00000611976 MYOM3Q5VTT5 1437 aa14.06□□□□□ -0.16
CDC42EP3-206ENST00000611976 RTN4Q9NQC3 1192 aaKnown RBP14.06□□□□□ -0.16
CDC42EP3-206ENST00000611976 MYBBP1AQ9BQG0 1328 aaKnown RBP14.05□□□□□ -0.16
CDC42EP3-206ENST00000611976 CASKIN1Q8WXD9 1431 aa14.05□□□□□ -0.16
CDC42EP3-206ENST00000611976 NCAPD3P42695 1498 aa14.04□□□□□ -0.16
CDC42EP3-206ENST00000611976 CNTLNQ9NXG0 1405 aa14.03□□□□□ -0.16
CDC42EP3-206ENST00000611976 FYCO1Q9BQS8 1478 aa14.03□□□□□ -0.16
CDC42EP3-206ENST00000611976 L1TD1Q5T7N2 865 aaKnown RBP14.03□□□□□ -0.16
CDC42EP3-206ENST00000611976 CASC1Q6TDU7 716 aa14.03□□□□□ -0.16
CDC42EP3-206ENST00000611976 PNNQ9H307 717 aaKnown RBP14.02□□□□□ -0.17
CDC42EP3-206ENST00000611976 NCLP19338 710 aaKnown RBP14.01□□□□□ -0.17
CDC42EP3-206ENST00000611976 USP47Q96K76 1375 aa14.01□□□□□ -0.17
CDC42EP3-206ENST00000611976 CCDC7Q96M83 1385 aa14□□□□□ -0.17
CDC42EP3-206ENST00000611976 RSPH4AQ5TD94 716 aa14□□□□□ -0.17
CDC42EP3-206ENST00000611976 USP35Q9P2H5 1018 aa13.99□□□□□ -0.17
CDC42EP3-206ENST00000611976 EIF3AQ14152 1382 aaKnown RBP13.99□□□□□ -0.17
CDC42EP3-206ENST00000611976 MORC1Q86VD1 984 aa13.99□□□□□ -0.17
CDC42EP3-206ENST00000611976 TIAM1Q13009 1591 aa13.99□□□□□ -0.17
CDC42EP3-206ENST00000611976 TNNT2P45379 298 aaPredicted RBP13.99□□□□□ -0.17
CDC42EP3-206ENST00000611976 HSCBQ8IWL3 235 aa13.98□□□□□ -0.17
CDC42EP3-206ENST00000611976 EFCAB5A4FU69 1503 aa13.98□□□□□ -0.17
CDC42EP3-206ENST00000611976 GOLGA2Q08379 1002 aa13.97□□□□□ -0.17
CDC42EP3-206ENST00000611976 NCOA2Q15596 1464 aa13.97□□□□□ -0.17
CDC42EP3-206ENST00000611976 HSP90AB1P08238 724 aaKnown RBP13.97□□□□□ -0.17
CDC42EP3-206ENST00000611976 RRP1P56182 461 aaKnown RBP13.97□□□□□ -0.17
CDC42EP3-206ENST00000611976 CFTRP13569 1480 aa13.96□□□□□ -0.18
CDC42EP3-206ENST00000611976 ST20-MTHFSA0A0A6YYL1 179 aa13.95□□□□□ -0.18
CDC42EP3-206ENST00000611976 GAPVD1Q14C86 1478 aa13.95□□□□□ -0.18
CDC42EP3-206ENST00000611976 U2SURPO15042 1029 aaKnown RBP13.95□□□□□ -0.18
CDC42EP3-206ENST00000611976 NAP1L5Q96NT1 182 aaPredicted RBP13.95□□□□□ -0.18
CDC42EP3-206ENST00000611976 CCDC144AA2RUR9 1427 aa13.94□□□□□ -0.18
CDC42EP3-206ENST00000611976 RWDD1Q9H446 243 aaPredicted RBP13.93□□□□□ -0.18
CDC42EP3-206ENST00000611976 KIF7Q2M1P5 1343 aa13.93□□□□□ -0.18
CDC42EP3-206ENST00000611976 PMFBP1Q8TBY8 1022 aa13.93□□□□□ -0.18
CDC42EP3-206ENST00000611976 POGKQ9P215 609 aa13.93□□□□□ -0.18
CDC42EP3-206ENST00000611976 RAD54L2Q9Y4B4 1467 aa13.93□□□□□ -0.18
CDC42EP3-206ENST00000611976 BICRAQ9NZM4 1560 aa13.93□□□□□ -0.18
CDC42EP3-206ENST00000611976 WASHC2AQ641Q2 1341 aa13.93□□□□□ -0.18
CDC42EP3-206ENST00000611976 PDE4AP27815 886 aa13.93□□□□□ -0.18
CDC42EP3-206ENST00000611976 CFAP44Q96MT7 982 aa13.92□□□□□ -0.18
CDC42EP3-206ENST00000611976 CENPQQ7L2Z9 268 aaPredicted RBP13.92□□□□□ -0.18
CDC42EP3-206ENST00000611976 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDC42EP3-206ENST00000611976 HNRNPMP52272 730 aaKnown RBP eCLIP13.91□□□□□ -0.18
CDC42EP3-206ENST00000611976 EFCAB2Q5VUJ9 269 aa13.9□□□□□ -0.18
CDC42EP3-206ENST00000611976 HFM1A2PYH4 1435 aa13.9□□□□□ -0.18
CDC42EP3-206ENST00000611976 EXOC6Q8TAG9 804 aa13.9□□□□□ -0.18
CDC42EP3-206ENST00000611976 HMGXB3Q12766 1538 aa13.9□□□□□ -0.18
CDC42EP3-206ENST00000611976 WDR97A6NE52 1622 aa13.9□□□□□ -0.18
CDC42EP3-206ENST00000611976 IPO8O15397 1037 aaKnown RBP13.89□□□□□ -0.19
CDC42EP3-206ENST00000611976 EHBP1L1Q8N3D4 1523 aa13.89□□□□□ -0.19
CDC42EP3-206ENST00000611976 PTMAP06454 111 aaKnown RBP13.89□□□□□ -0.19
CDC42EP3-206ENST00000611976 PTMSP20962 102 aa13.89□□□□□ -0.19
CDC42EP3-206ENST00000611976 UNC13AQ9UPW8 1703 aa13.88□□□□□ -0.19
CDC42EP3-206ENST00000611976 SENP3Q9H4L4 574 aaPredicted RBP13.88□□□□□ -0.19
CDC42EP3-206ENST00000611976 MIA2Q96PC5 1412 aa13.88□□□□□ -0.19
CDC42EP3-206ENST00000611976 CENPJQ9HC77 1338 aaPredicted RBP13.87□□□□□ -0.19
CDC42EP3-206ENST00000611976 FAM161AQ3B820 660 aa13.87□□□□□ -0.19
CDC42EP3-206ENST00000611976 PANK3Q9H999 370 aa13.87□□□□□ -0.19
CDC42EP3-206ENST00000611976 MAP3K1Q13233 1512 aa13.86□□□□□ -0.19
CDC42EP3-206ENST00000611976 HAP1P54257 671 aaPredicted RBP13.85□□□□□ -0.19
CDC42EP3-206ENST00000611976 GBP4Q96PP9 640 aa13.85□□□□□ -0.19
CDC42EP3-206ENST00000611976 SLKQ9H2G2 1235 aaPredicted RBP13.85□□□□□ -0.19
CDC42EP3-206ENST00000611976 SRPK2P78362 688 aaKnown RBP13.85□□□□□ -0.19
CDC42EP3-206ENST00000611976 BRD4O60885 1362 aaPredicted RBP13.84□□□□□ -0.19
CDC42EP3-206ENST00000611976 U2AF1L5P0DN76 240 aaPredicted RBP13.84□□□□□ -0.19
CDC42EP3-206ENST00000611976 U2AF1Q01081 240 aaKnown RBP eCLIP13.84□□□□□ -0.19
CDC42EP3-206ENST00000611976 CRBNQ96SW2 442 aa13.84□□□□□ -0.19
CDC42EP3-206ENST00000611976 JPH4Q96JJ6 628 aa13.83□□□□□ -0.19
CDC42EP3-206ENST00000611976 SPRYD3Q8NCJ5 442 aa13.83□□□□□ -0.2
CDC42EP3-206ENST00000611976 CALD1Q05682 793 aaKnown RBP13.83□□□□□ -0.2
CDC42EP3-206ENST00000611976 CCDC146Q8IYE0 955 aa13.83□□□□□ -0.2
CDC42EP3-206ENST00000611976 ITPRIPQ8IWB1 547 aa13.82□□□□□ -0.2
CDC42EP3-206ENST00000611976 E9PSI1 815 aa13.81□□□□□ -0.2
CDC42EP3-206ENST00000611976 PLIN1O60240 522 aa13.81□□□□□ -0.2
CDC42EP3-206ENST00000611976 DNTTIP2Q5QJE6 756 aaKnown RBP13.81□□□□□ -0.2
CDC42EP3-206ENST00000611976 NGEFQ8N5V2 710 aa13.81□□□□□ -0.2
CDC42EP3-206ENST00000611976 GSE1Q14687 1217 aa13.8□□□□□ -0.2
CDC42EP3-206ENST00000611976 HDGFL2Q7Z4V5 671 aaPredicted RBP13.8□□□□□ -0.2
CDC42EP3-206ENST00000611976 CGNL1Q0VF96 1302 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms