RNA–Protein interactions for RNA: ENST00000611829.4

LINC00635-223, long intergenic non-protein coding RNA 635, human

TSL 5

Gene LINC00635, Length 290 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00635-223	ENST00000611829	ARX	Q96QS3	562 aa		10.59	□□□□□ -0.71
LINC00635-223	ENST00000611829	PAK3	O75914	559 aa	Predicted RBP	10.58	□□□□□ -0.72
LINC00635-223	ENST00000611829	PDE4A	P27815	886 aa		10.57	□□□□□ -0.72
LINC00635-223	ENST00000611829	FXR2	P51116	673 aa	Known RBP eCLIP	10.57	□□□□□ -0.72
LINC00635-223	ENST00000611829	ZMYND10	O75800	440 aa		10.55	□□□□□ -0.72
LINC00635-223	ENST00000611829	CC2D2A	Q9P2K1	1620 aa		10.55	□□□□□ -0.72
LINC00635-223	ENST00000611829	MFSD10	Q14728	455 aa		10.53	□□□□□ -0.72
LINC00635-223	ENST00000611829	CRISPLD2	Q9H0B8	497 aa		10.53	□□□□□ -0.72
LINC00635-223	ENST00000611829	CADPS	Q9ULU8	1353 aa		10.52	□□□□□ -0.73
LINC00635-223	ENST00000611829	SMYD5	Q6GMV2	418 aa		10.51	□□□□□ -0.73
LINC00635-223	ENST00000611829	DDX27	Q96GQ7	796 aa	Known RBP	10.51	□□□□□ -0.73
LINC00635-223	ENST00000611829	PHF12	Q96QT6	1004 aa		10.51	□□□□□ -0.73
LINC00635-223	ENST00000611829	ZRANB1	Q9UGI0	708 aa		10.5	□□□□□ -0.73
LINC00635-223	ENST00000611829	CFTR	P13569	1480 aa		10.49	□□□□□ -0.73
LINC00635-223	ENST00000611829	WRN	Q14191	1432 aa	Predicted RBP eCLIP	10.49	□□□□□ -0.73
LINC00635-223	ENST00000611829	RBM26	Q5T8P6	1007 aa	Known RBP	10.48	□□□□□ -0.73
LINC00635-223	ENST00000611829	BARGIN	Q6ZT62	677 aa		10.48	□□□□□ -0.73
LINC00635-223	ENST00000611829	MLLT3	P42568	568 aa	Predicted RBP	10.47	□□□□□ -0.73
LINC00635-223	ENST00000611829	TRPC6	Q9Y210	931 aa		10.47	□□□□□ -0.73
LINC00635-223	ENST00000611829	CAMK2B	Q13554	666 aa		10.46	□□□□□ -0.73
LINC00635-223	ENST00000611829	PIP4P2	Q8N4L2	257 aa		10.46	□□□□□ -0.73
LINC00635-223	ENST00000611829	TMEM106C	Q9BVX2	250 aa		10.46	□□□□□ -0.73
LINC00635-223	ENST00000611829	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.46	□□□□□ -0.73
LINC00635-223	ENST00000611829	EEA1	Q15075	1411 aa		10.46	□□□□□ -0.74
LINC00635-223	ENST00000611829	GOLGA2	Q08379	1002 aa		10.45	□□□□□ -0.74
LINC00635-223	ENST00000611829	HOMEZ	Q8IX15	550 aa		10.44	□□□□□ -0.74
LINC00635-223	ENST00000611829	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.44	□□□□□ -0.74
LINC00635-223	ENST00000611829	FAM9A	Q8IZU1	332 aa	Predicted RBP	10.43	□□□□□ -0.74
LINC00635-223	ENST00000611829	CD44	P16070	742 aa	Known RBP	10.42	□□□□□ -0.74
LINC00635-223	ENST00000611829	KRI1	Q8N9T8	703 aa	Known RBP	10.41	□□□□□ -0.74
LINC00635-223	ENST00000611829	AK7	Q96M32	723 aa		10.41	□□□□□ -0.74
LINC00635-223	ENST00000611829	LOC105371045	A0A1W2PR82	267 aa		10.4	□□□□□ -0.74
LINC00635-223	ENST00000611829	IL27	Q8NEV9	243 aa		10.4	□□□□□ -0.74
LINC00635-223	ENST00000611829	MKRN3	Q13064	507 aa	Known RBP	10.39	□□□□□ -0.75
LINC00635-223	ENST00000611829	GPIHBP1	Q8IV16	184 aa		10.39	□□□□□ -0.75
LINC00635-223	ENST00000611829	PDS5B	Q9NTI5	1447 aa		10.39	□□□□□ -0.75
LINC00635-223	ENST00000611829	ABCC8	Q09428	1581 aa		10.39	□□□□□ -0.75
LINC00635-223	ENST00000611829	PPP1R15B	Q5SWA1	713 aa		10.38	□□□□□ -0.75
LINC00635-223	ENST00000611829	CHRDL2	Q6WN34	429 aa		10.38	□□□□□ -0.75
LINC00635-223	ENST00000611829	MS4A3	Q96HJ5	214 aa		10.37	□□□□□ -0.75
LINC00635-223	ENST00000611829	DPYSL4	O14531	572 aa		10.36	□□□□□ -0.75
LINC00635-223	ENST00000611829	EMILIN3	Q9NT22	766 aa		10.35	□□□□□ -0.75
LINC00635-223	ENST00000611829	GPHN	Q9NQX3	736 aa	Predicted RBP	10.34	□□□□□ -0.75
LINC00635-223	ENST00000611829	DAXX	Q9UER7	740 aa	Predicted RBP	10.34	□□□□□ -0.75
LINC00635-223	ENST00000611829	LAMC3	Q9Y6N6	1575 aa		10.34	□□□□□ -0.75
LINC00635-223	ENST00000611829	TRIM66	O15016	1216 aa		10.33	□□□□□ -0.76
LINC00635-223	ENST00000611829	KDM4C	Q9H3R0	1056 aa		10.33	□□□□□ -0.76
LINC00635-223	ENST00000611829	FANCD2	Q9BXW9	1451 aa		10.33	□□□□□ -0.76
LINC00635-223	ENST00000611829	DPY19L2	Q6NUT2	758 aa		10.32	□□□□□ -0.76
LINC00635-223	ENST00000611829	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.32	□□□□□ -0.76
LINC00635-223	ENST00000611829	DSG2	Q14126	1118 aa		10.31	□□□□□ -0.76
LINC00635-223	ENST00000611829	TOP2B	Q02880	1626 aa		10.31	□□□□□ -0.76
LINC00635-223	ENST00000611829	PDE4D	Q08499	809 aa		10.3	□□□□□ -0.76
LINC00635-223	ENST00000611829	SOGA1	O94964	1423 aa		10.3	□□□□□ -0.76
LINC00635-223	ENST00000611829	KIF27	Q86VH2	1401 aa		10.3	□□□□□ -0.76
LINC00635-223	ENST00000611829	UBTF	P17480	764 aa	Known RBP	10.29	□□□□□ -0.76
LINC00635-223	ENST00000611829	TTLL13P	A6NNM8	815 aa		10.28	□□□□□ -0.76
LINC00635-223	ENST00000611829	SYNJ1	O43426	1573 aa		10.27	□□□□□ -0.76
LINC00635-223	ENST00000611829	ILDR1	Q86SU0	546 aa	Predicted RBP	10.27	□□□□□ -0.77
LINC00635-223	ENST00000611829	CEP164	Q9UPV0	1460 aa		10.27	□□□□□ -0.77
LINC00635-223	ENST00000611829	SPDYE16	A6NNV3	312 aa	Predicted RBP	10.26	□□□□□ -0.77
LINC00635-223	ENST00000611829	CUX1	P39880	1505 aa		10.25	□□□□□ -0.77
LINC00635-223	ENST00000611829	PDIA6	Q15084	440 aa		10.25	□□□□□ -0.77
LINC00635-223	ENST00000611829	BIVM-ERCC5	R4GMW8	1640 aa		10.25	□□□□□ -0.77
LINC00635-223	ENST00000611829	GPR37	O15354	613 aa		10.24	□□□□□ -0.77
LINC00635-223	ENST00000611829	TNIK	Q9UKE5	1360 aa		10.24	□□□□□ -0.77
LINC00635-223	ENST00000611829	TIE1	P35590	1138 aa		10.23	□□□□□ -0.77
LINC00635-223	ENST00000611829	BMP2K	Q9NSY1	1161 aa	Predicted RBP	10.23	□□□□□ -0.77
LINC00635-223	ENST00000611829	PRDM2	Q13029	1718 aa		10.23	□□□□□ -0.77
LINC00635-223	ENST00000611829	NES	P48681	1621 aa		10.22	□□□□□ -0.77
LINC00635-223	ENST00000611829	GRXCR2	A6NFK2	248 aa		10.22	□□□□□ -0.77
LINC00635-223	ENST00000611829	MICALL2	Q8IY33	904 aa		10.22	□□□□□ -0.77
LINC00635-223	ENST00000611829	FAM117A	Q9C073	453 aa		10.22	□□□□□ -0.77
LINC00635-223	ENST00000611829	GOLGA3	Q08378	1498 aa		10.22	□□□□□ -0.77
LINC00635-223	ENST00000611829	TMC2	Q8TDI7	906 aa		10.21	□□□□□ -0.77
LINC00635-223	ENST00000611829	ZMYND15	Q9H091	742 aa		10.21	□□□□□ -0.77
LINC00635-223	ENST00000611829	TRIM35	Q9UPQ4	493 aa		10.21	□□□□□ -0.77
LINC00635-223	ENST00000611829	NUTM2F	A1L443	756 aa		10.2	□□□□□ -0.78
LINC00635-223	ENST00000611829	FOXK1	P85037	733 aa		10.2	□□□□□ -0.78
LINC00635-223	ENST00000611829	DNMBP	Q6XZF7	1577 aa		10.2	□□□□□ -0.78
LINC00635-223	ENST00000611829	PLPP6	Q8IY26	295 aa		10.2	□□□□□ -0.78
LINC00635-223	ENST00000611829	TOPBP1	Q92547	1522 aa		10.18	□□□□□ -0.78
LINC00635-223	ENST00000611829	C19orf67	A6NJJ6	358 aa		10.18	□□□□□ -0.78
LINC00635-223	ENST00000611829	RUSC2	Q8N2Y8	1516 aa		10.17	□□□□□ -0.78
LINC00635-223	ENST00000611829	CUX2	O14529	1486 aa		10.17	□□□□□ -0.78
LINC00635-223	ENST00000611829	FGD5	Q6ZNL6	1462 aa		10.17	□□□□□ -0.78
LINC00635-223	ENST00000611829	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.17	□□□□□ -0.78
LINC00635-223	ENST00000611829	IGF1R	P08069	1367 aa		10.16	□□□□□ -0.78
LINC00635-223	ENST00000611829	C2orf72	A6NCS6	295 aa		10.16	□□□□□ -0.78
LINC00635-223	ENST00000611829	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.15	□□□□□ -0.78
LINC00635-223	ENST00000611829	PLEKHG3	A1L390	1219 aa		10.15	□□□□□ -0.78
LINC00635-223	ENST00000611829	MAP3K9	P80192	1104 aa		10.15	□□□□□ -0.78
LINC00635-223	ENST00000611829	PDCD7	Q8N8D1	485 aa	Known RBP	10.15	□□□□□ -0.78
LINC00635-223	ENST00000611829	CCDC102A	Q96A19	550 aa		10.15	□□□□□ -0.78
LINC00635-223	ENST00000611829	ERCC6	Q03468	1493 aa		10.15	□□□□□ -0.78
LINC00635-223	ENST00000611829	GALR2	O43603	387 aa	Predicted RBP	10.14	□□□□□ -0.79
LINC00635-223	ENST00000611829	FECH	P22830	423 aa		10.14	□□□□□ -0.79
LINC00635-223	ENST00000611829	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
LINC00635-223	ENST00000611829	PRX	Q9BXM0	1461 aa		10.14	□□□□□ -0.79
LINC00635-223	ENST00000611829	MRC2	Q9UBG0	1479 aa		10.14	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms