RNA–Protein interactions for RNA: ENST00000611390.1

CDK13-206, Transcript of cyclin dependent kinase 13, humanhuman

TSL 5 BASIC

Gene CDK13, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-206ENST00000611390 ACIN1Q9UKV3 1341 aaKnown RBP17.28■□□□□ 0.36
CDK13-206ENST00000611390 KDM6BO15054 1643 aa17.27■□□□□ 0.35
CDK13-206ENST00000611390 ZNF644Q9H582 1327 aaPredicted RBP17.26■□□□□ 0.35
CDK13-206ENST00000611390 PLEKHD1A6NEE1 506 aa17.26■□□□□ 0.35
CDK13-206ENST00000611390 MIER1Q8N108 512 aa17.25■□□□□ 0.35
CDK13-206ENST00000611390 CFDP1Q9UEE9 299 aaPredicted RBP17.25■□□□□ 0.35
CDK13-206ENST00000611390 ABCC10Q5T3U5 1492 aa17.25■□□□□ 0.35
CDK13-206ENST00000611390 PPP1R15AO75807 674 aaPredicted RBP17.23■□□□□ 0.35
CDK13-206ENST00000611390 DENND4BO75064 1496 aaPredicted RBP17.22■□□□□ 0.35
CDK13-206ENST00000611390 TONSLQ96HA7 1378 aa17.22■□□□□ 0.35
CDK13-206ENST00000611390 ADGRL2O95490 1459 aa17.2■□□□□ 0.34
CDK13-206ENST00000611390 CDC42BPAQ5VT25 1732 aa17.19■□□□□ 0.34
CDK13-206ENST00000611390 TRIM52Q96A61 297 aa17.19■□□□□ 0.34
CDK13-206ENST00000611390 CROCC2H7BZ55 1655 aa17.19■□□□□ 0.34
CDK13-206ENST00000611390 ADGBQ8N7X0 1667 aa17.19■□□□□ 0.34
CDK13-206ENST00000611390 CENPBP07199 599 aaPredicted RBP17.19■□□□□ 0.34
CDK13-206ENST00000611390 CLASP1Q7Z460 1538 aa17.18■□□□□ 0.34
CDK13-206ENST00000611390 NCOA1Q15788 1441 aa17.17■□□□□ 0.34
CDK13-206ENST00000611390 MPHOSPH9Q99550 1183 aa17.16■□□□□ 0.34
CDK13-206ENST00000611390 SHANK2Q9UPX8 1470 aa17.15■□□□□ 0.34
CDK13-206ENST00000611390 ABCC2Q92887 1545 aa17.15■□□□□ 0.34
CDK13-206ENST00000611390 ERCC6L2Q5T890 1561 aa17.15■□□□□ 0.34
CDK13-206ENST00000611390 ZNF777Q9ULD5 760 aaPredicted RBP17.15■□□□□ 0.34
CDK13-206ENST00000611390 KDM5BQ9UGL1 1544 aa17.14■□□□□ 0.33
CDK13-206ENST00000611390 ANKRD30AQ9BXX3 1397 aa17.12■□□□□ 0.33
CDK13-206ENST00000611390 PREX2Q70Z35 1606 aa17.09■□□□□ 0.33
CDK13-206ENST00000611390 ARHGEF5Q12774 1597 aa17.09■□□□□ 0.33
CDK13-206ENST00000611390 ANKRD30BQ9BXX2 1392 aa17.08■□□□□ 0.33
CDK13-206ENST00000611390 C9orf84Q5VXU9 1444 aa17.08■□□□□ 0.32
CDK13-206ENST00000611390 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.32
CDK13-206ENST00000611390 UHRF1BP1LA0JNW5 1464 aa17.07■□□□□ 0.32
CDK13-206ENST00000611390 PZPP20742 1482 aa17.07■□□□□ 0.32
CDK13-206ENST00000611390 MBD5Q9P267 1494 aa17.06■□□□□ 0.32
CDK13-206ENST00000611390 RPRD2Q5VT52 1461 aaKnown RBP17.05■□□□□ 0.32
CDK13-206ENST00000611390 SAMD9LQ8IVG5 1584 aa17.05■□□□□ 0.32
CDK13-206ENST00000611390 SLC4A1APQ9BWU0 796 aaKnown RBP17.05■□□□□ 0.32
CDK13-206ENST00000611390 ANKRD50Q9ULJ7 1429 aa17.05■□□□□ 0.32
CDK13-206ENST00000611390 CDC42BPBQ9Y5S2 1711 aa17.05■□□□□ 0.32
CDK13-206ENST00000611390 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.03■□□□□ 0.324e-8■■■■■ 52.5
CDK13-206ENST00000611390 CCDC141Q6ZP82 1450 aa17.03■□□□□ 0.32
CDK13-206ENST00000611390 TTC37Q6PGP7 1564 aa17.03■□□□□ 0.32
CDK13-206ENST00000611390 TSPY4P0CV99 314 aa17.02■□□□□ 0.32
CDK13-206ENST00000611390 TSPY10P0CW01 314 aa17.02■□□□□ 0.32
CDK13-206ENST00000611390 FOXD1Q16676 465 aa17.02■□□□□ 0.32
CDK13-206ENST00000611390 YTHDC1Q96MU7 727 aaKnown RBP17.02■□□□□ 0.32
CDK13-206ENST00000611390 RSPH4AQ5TD94 716 aa17.01■□□□□ 0.31
CDK13-206ENST00000611390 ZCCHC11Q5TAX3 1644 aaKnown RBP17■□□□□ 0.31
CDK13-206ENST00000611390 TEX14Q8IWB6 1497 aa16.99■□□□□ 0.31
CDK13-206ENST00000611390 KIAA1107Q9UPP5 1409 aa16.99■□□□□ 0.31
CDK13-206ENST00000611390 HNRNPMP52272 730 aaKnown RBP eCLIP16.99■□□□□ 0.316e-9■■■■■ 33.2
CDK13-206ENST00000611390 ARHGAP5Q13017 1502 aa16.99■□□□□ 0.31
CDK13-206ENST00000611390 KDM5DQ9BY66 1539 aa16.99■□□□□ 0.31
CDK13-206ENST00000611390 KIF15Q9NS87 1388 aa16.98■□□□□ 0.31
CDK13-206ENST00000611390 PLEKHH2Q8IVE3 1493 aa16.98■□□□□ 0.31
CDK13-206ENST00000611390 L3MBTL2Q969R5 705 aa16.97■□□□□ 0.31
CDK13-206ENST00000611390 MYO5CQ9NQX4 1742 aa16.97■□□□□ 0.31
CDK13-206ENST00000611390 MAST1Q9Y2H9 1570 aa16.97■□□□□ 0.31
CDK13-206ENST00000611390 SYCP2Q9BX26 1530 aa16.96■□□□□ 0.31
CDK13-206ENST00000611390 DDX10Q13206 875 aaKnown RBP16.96■□□□□ 0.31
CDK13-206ENST00000611390 HIRIP3Q9BW71 556 aaPredicted RBP16.95■□□□□ 0.3
CDK13-206ENST00000611390 PLCH2O75038 1416 aa16.92■□□□□ 0.3
CDK13-206ENST00000611390 NUP155O75694 1391 aa16.92■□□□□ 0.3
CDK13-206ENST00000611390 PKD2Q13563 968 aa16.92■□□□□ 0.3
CDK13-206ENST00000611390 PLXNC1O60486 1568 aa16.9■□□□□ 0.3
CDK13-206ENST00000611390 KCNH8Q96L42 1107 aa16.89■□□□□ 0.29
CDK13-206ENST00000611390 HSPA5P11021 654 aaKnown RBP16.88■□□□□ 0.29
CDK13-206ENST00000611390 GTF3C3Q9Y5Q9 886 aa16.88■□□□□ 0.29
CDK13-206ENST00000611390 ARAP3Q8WWN8 1544 aa16.88■□□□□ 0.29
CDK13-206ENST00000611390 EIF4G2P78344 907 aaKnown RBP eCLIP16.88■□□□□ 0.29
CDK13-206ENST00000611390 ARHGEF12Q9NZN5 1544 aa16.87■□□□□ 0.29
CDK13-206ENST00000611390 NBPF8Q3BBV2 869 aa16.86■□□□□ 0.29
CDK13-206ENST00000611390 EFCAB2Q5VUJ9 269 aa16.86■□□□□ 0.29
CDK13-206ENST00000611390 ABCC1P33527 1531 aa16.86■□□□□ 0.29
CDK13-206ENST00000611390 UNC13BO14795 1591 aa16.85■□□□□ 0.29
CDK13-206ENST00000611390 WDR7Q9Y4E6 1490 aa16.84■□□□□ 0.29
CDK13-206ENST00000611390 FAM135AQ9P2D6 1515 aa16.84■□□□□ 0.29
CDK13-206ENST00000611390 DUOX2Q9NRD8 1548 aa16.83■□□□□ 0.28
CDK13-206ENST00000611390 ANP32CO43423 234 aa16.81■□□□□ 0.28
CDK13-206ENST00000611390 CCER2I3L3R5 266 aa16.81■□□□□ 0.28
CDK13-206ENST00000611390 ERBINQ96RT1 1412 aa16.81■□□□□ 0.28
CDK13-206ENST00000611390 WASHC2AQ641Q2 1341 aa16.8■□□□□ 0.28
CDK13-206ENST00000611390 SPATA31E1Q6ZUB1 1445 aa16.8■□□□□ 0.28
CDK13-206ENST00000611390 UHRF1BP1Q6BDS2 1440 aa16.79■□□□□ 0.28
CDK13-206ENST00000611390 MAGI2Q86UL8 1455 aa16.78■□□□□ 0.28
CDK13-206ENST00000611390 TRAPPC8Q9Y2L5 1435 aa16.78■□□□□ 0.28
CDK13-206ENST00000611390 IQGAP3Q86VI3 1631 aa16.78■□□□□ 0.28
CDK13-206ENST00000611390 ABCA9Q8IUA7 1624 aa16.78■□□□□ 0.28
CDK13-206ENST00000611390 OSCARQ8IYS5 282 aa16.77■□□□□ 0.28
CDK13-206ENST00000611390 RTEL1-TNFRSF6BF6WH68 1400 aa16.76■□□□□ 0.27
CDK13-206ENST00000611390 CCDC7Q96M83 1385 aa16.75■□□□□ 0.27
CDK13-206ENST00000611390 RALGAPBQ86X10 1494 aa16.74■□□□□ 0.27
CDK13-206ENST00000611390 ASXL2Q76L83 1435 aa16.74■□□□□ 0.27
CDK13-206ENST00000611390 CNTLNQ9NXG0 1405 aa16.74■□□□□ 0.27
CDK13-206ENST00000611390 ZFYVE16Q7Z3T8 1539 aa16.73■□□□□ 0.27
CDK13-206ENST00000611390 FANCAO15360 1455 aa16.72■□□□□ 0.27
CDK13-206ENST00000611390 SPAG9O60271 1321 aaKnown RBP16.72■□□□□ 0.27
CDK13-206ENST00000611390 CCDC144AA2RUR9 1427 aa16.71■□□□□ 0.27
CDK13-206ENST00000611390 POLR1AO95602 1720 aaPredicted RBP16.71■□□□□ 0.27
CDK13-206ENST00000611390 PLA2R1Q13018 1463 aa16.7■□□□□ 0.26
CDK13-206ENST00000611390 C11orf95C9JLR9 678 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms