RNA–Protein interactions for RNA: ENST00000611331.1

LINC01949-202, Transcript of long intergenic non-protein coding RNA 1949, humanhuman

TSL 2

Gene LINC01949, Length 1,618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01949-202ENST00000611331 STRCQ7RTU9 1775 aa13.16□□□□□ -0.3
LINC01949-202ENST00000611331 FANCAO15360 1455 aa13.16□□□□□ -0.3
LINC01949-202ENST00000611331 PREX1Q8TCU6 1659 aa13.16□□□□□ -0.3
LINC01949-202ENST00000611331 ABCA8O94911 1581 aa13.15□□□□□ -0.3
LINC01949-202ENST00000611331 ABCA9Q8IUA7 1624 aa13.15□□□□□ -0.3
LINC01949-202ENST00000611331 IQSEC2Q5JU85 1478 aa13.14□□□□□ -0.31
LINC01949-202ENST00000611331 TTC37Q6PGP7 1564 aa13.14□□□□□ -0.31
LINC01949-202ENST00000611331 FER1L4A9Z1Z3 1794 aa13.13□□□□□ -0.31
LINC01949-202ENST00000611331 MYCNP04198 464 aaPredicted RBP13.12□□□□□ -0.31
LINC01949-202ENST00000611331 AKNAQ7Z591 1439 aa13.11□□□□□ -0.31
LINC01949-202ENST00000611331 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.1□□□□□ -0.31
LINC01949-202ENST00000611331 MLECQ14165 292 aa13.1□□□□□ -0.31
LINC01949-202ENST00000611331 HNRNPUL2Q1KMD3 747 aaKnown RBP13.1□□□□□ -0.31
LINC01949-202ENST00000611331 LTBP4Q8N2S1 1624 aa13.1□□□□□ -0.31
LINC01949-202ENST00000611331 PTPRTO14522 1441 aa13.09□□□□□ -0.31
LINC01949-202ENST00000611331 SIGLEC1Q9BZZ2 1709 aa13.09□□□□□ -0.31
LINC01949-202ENST00000611331 ARID3CA6NKF2 412 aa13.08□□□□□ -0.32
LINC01949-202ENST00000611331 RICTORQ6R327 1708 aa13.07□□□□□ -0.32
LINC01949-202ENST00000611331 DENND4BO75064 1496 aaPredicted RBP13.07□□□□□ -0.32
LINC01949-202ENST00000611331 GOLGA3Q08378 1498 aa13.07□□□□□ -0.32
LINC01949-202ENST00000611331 UHRF1BP1Q6BDS2 1440 aa13.06□□□□□ -0.32
LINC01949-202ENST00000611331 SUPT5HO00267 1087 aaKnown RBP13.06□□□□□ -0.32
LINC01949-202ENST00000611331 RAPGEF2Q9Y4G8 1499 aa13.06□□□□□ -0.32
LINC01949-202ENST00000611331 ZFYVE16Q7Z3T8 1539 aa13.05□□□□□ -0.32
LINC01949-202ENST00000611331 MED1Q15648 1581 aaPredicted RBP13.05□□□□□ -0.32
LINC01949-202ENST00000611331 EFCAB5A4FU69 1503 aa13.04□□□□□ -0.32
LINC01949-202ENST00000611331 UBAP1LF5GYI3 381 aa13.04□□□□□ -0.32
LINC01949-202ENST00000611331 FHOD3Q2V2M9 1422 aa13.04□□□□□ -0.32
LINC01949-202ENST00000611331 ATP10BO94823 1461 aa13.04□□□□□ -0.32
LINC01949-202ENST00000611331 CEBPAP49715 358 aaPredicted RBP13.03□□□□□ -0.32
LINC01949-202ENST00000611331 SAMD1Q6SPF0 538 aaPredicted RBP13.03□□□□□ -0.32
LINC01949-202ENST00000611331 ZMYM4Q5VZL5 1548 aa13.03□□□□□ -0.32
LINC01949-202ENST00000611331 APLP2Q06481 763 aa13.02□□□□□ -0.33
LINC01949-202ENST00000611331 ARHGEF12Q9NZN5 1544 aa13.01□□□□□ -0.33
LINC01949-202ENST00000611331 CTTNBP2Q8WZ74 1663 aa13□□□□□ -0.33
LINC01949-202ENST00000611331 FAM9AQ8IZU1 332 aaPredicted RBP12.99□□□□□ -0.33
LINC01949-202ENST00000611331 MAGI2Q86UL8 1455 aa12.99□□□□□ -0.33
LINC01949-202ENST00000611331 POTEHQ6S545 545 aa12.99□□□□□ -0.33
LINC01949-202ENST00000611331 CFAP74Q9C0B2 1584 aa12.98□□□□□ -0.33
LINC01949-202ENST00000611331 SETD1BQ9UPS6 1966 aaKnown RBP12.97□□□□□ -0.33
LINC01949-202ENST00000611331 HECW1Q76N89 1606 aa12.95□□□□□ -0.34
LINC01949-202ENST00000611331 NCOA1Q15788 1441 aa12.94□□□□□ -0.34
LINC01949-202ENST00000611331 C9orf84Q5VXU9 1444 aa12.93□□□□□ -0.34
LINC01949-202ENST00000611331 HSPA1LP34931 641 aa12.93□□□□□ -0.34
LINC01949-202ENST00000611331 ATP10AO60312 1499 aa12.92□□□□□ -0.34
LINC01949-202ENST00000611331 ZNF335Q9H4Z2 1342 aaPredicted RBP12.92□□□□□ -0.34
LINC01949-202ENST00000611331 P3H3Q8IVL6 736 aa12.88□□□□□ -0.35
LINC01949-202ENST00000611331 C3P01024 1663 aa12.88□□□□□ -0.35
LINC01949-202ENST00000611331 RAPGEF6Q8TEU7 1601 aa12.88□□□□□ -0.35
LINC01949-202ENST00000611331 PIP4K2BP78356 416 aa12.88□□□□□ -0.35
LINC01949-202ENST00000611331 CAMSAP1Q5T5Y3 1602 aa12.87□□□□□ -0.35
LINC01949-202ENST00000611331 TRAPPC8Q9Y2L5 1435 aa12.86□□□□□ -0.35
LINC01949-202ENST00000611331 ATXN8OSP0DMR3 200 aa12.86□□□□□ -0.35
LINC01949-202ENST00000611331 SCAPERQ9BY12 1400 aa12.85□□□□□ -0.35
LINC01949-202ENST00000611331 AMER1Q5JTC6 1135 aaPredicted RBP12.85□□□□□ -0.35
LINC01949-202ENST00000611331 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC01949-202ENST00000611331 PLEKHD1A6NEE1 506 aa12.84□□□□□ -0.35
LINC01949-202ENST00000611331 ESF1Q9H501 851 aaKnown RBP12.83□□□□□ -0.36
LINC01949-202ENST00000611331 NCKAP5LQ9HCH0 1330 aa12.83□□□□□ -0.36
LINC01949-202ENST00000611331 TOM1O60784 492 aa12.82□□□□□ -0.36
LINC01949-202ENST00000611331 NUP153P49790 1475 aaKnown RBP12.82□□□□□ -0.36
LINC01949-202ENST00000611331 CAPN15O75808 1086 aa12.81□□□□□ -0.36
LINC01949-202ENST00000611331 SPINK5Q9NQ38 1064 aaPredicted RBP12.81□□□□□ -0.36
LINC01949-202ENST00000611331 PKD2Q13563 968 aa12.78□□□□□ -0.36
LINC01949-202ENST00000611331 ZNF219Q9P2Y4 722 aaPredicted RBP12.78□□□□□ -0.36
LINC01949-202ENST00000611331 MYT1LQ9UL68 1186 aa12.77□□□□□ -0.37
LINC01949-202ENST00000611331 PLCH2O75038 1416 aa12.76□□□□□ -0.37
LINC01949-202ENST00000611331 SAMD9Q5K651 1589 aa12.75□□□□□ -0.37
LINC01949-202ENST00000611331 REREQ9P2R6 1566 aa12.75□□□□□ -0.37
LINC01949-202ENST00000611331 PLA2R1Q13018 1463 aa12.75□□□□□ -0.37
LINC01949-202ENST00000611331 ZNF518AQ6AHZ1 1483 aa12.75□□□□□ -0.37
LINC01949-202ENST00000611331 NPATQ14207 1427 aa12.75□□□□□ -0.37
LINC01949-202ENST00000611331 CNTLNQ9NXG0 1405 aa12.75□□□□□ -0.37
LINC01949-202ENST00000611331 DIP2CQ9Y2E4 1556 aa12.75□□□□□ -0.37
LINC01949-202ENST00000611331 SUPT6HQ7KZ85 1726 aaKnown RBP12.74□□□□□ -0.37
LINC01949-202ENST00000611331 AGLP35573 1532 aa12.74□□□□□ -0.37
LINC01949-202ENST00000611331 RGS17Q9UGC6 210 aaPredicted RBP12.73□□□□□ -0.37
LINC01949-202ENST00000611331 TCOF1Q13428 1488 aaKnown RBP12.73□□□□□ -0.37
LINC01949-202ENST00000611331 RTN4Q9NQC3 1192 aaKnown RBP12.73□□□□□ -0.37
LINC01949-202ENST00000611331 CPS1P31327 1500 aa12.73□□□□□ -0.37
LINC01949-202ENST00000611331 KDM5CP41229 1560 aa12.72□□□□□ -0.37
LINC01949-202ENST00000611331 EFCAB2Q5VUJ9 269 aa12.72□□□□□ -0.37
LINC01949-202ENST00000611331 ZNF142P52746 1687 aaPredicted RBP12.72□□□□□ -0.37
LINC01949-202ENST00000611331 PTPRKQ15262 1439 aa12.71□□□□□ -0.37
LINC01949-202ENST00000611331 PRXQ9BXM0 1461 aa12.7□□□□□ -0.38
LINC01949-202ENST00000611331 AFAP1Q8N556 730 aa12.7□□□□□ -0.38
LINC01949-202ENST00000611331 ABCA6Q8N139 1617 aa12.7□□□□□ -0.38
LINC01949-202ENST00000611331 MYO3AQ8NEV4 1616 aa12.69□□□□□ -0.38
LINC01949-202ENST00000611331 MROH2AA6NES4 1674 aa12.69□□□□□ -0.38
LINC01949-202ENST00000611331 MYO5CQ9NQX4 1742 aa12.69□□□□□ -0.38
LINC01949-202ENST00000611331 CEP170BQ9Y4F5 1589 aaPredicted RBP12.68□□□□□ -0.38
LINC01949-202ENST00000611331 ATF5Q9Y2D1 282 aaPredicted RBP12.67□□□□□ -0.38
LINC01949-202ENST00000611331 ALKQ9UM73 1620 aa12.67□□□□□ -0.38
LINC01949-202ENST00000611331 SHANK2Q9UPX8 1470 aa12.67□□□□□ -0.38
LINC01949-202ENST00000611331 ZMYM3Q14202 1370 aa12.66□□□□□ -0.38
LINC01949-202ENST00000611331 MLH3Q9UHC1 1453 aa12.65□□□□□ -0.38
LINC01949-202ENST00000611331 FKBP8Q14318 412 aa12.65□□□□□ -0.38
LINC01949-202ENST00000611331 POTEAQ6S8J7 498 aa12.64□□□□□ -0.39
LINC01949-202ENST00000611331 DAXXQ9UER7 740 aaPredicted RBP12.64□□□□□ -0.39
LINC01949-202ENST00000611331 ARHGAP5Q13017 1502 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms