RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 ITSN2Q9NZM3 1697 aa27.09■■□□□ 1.93
SEMA3B-210ENST00000611067 PTPRKQ15262 1439 aa27.03■■□□□ 1.92
SEMA3B-210ENST00000611067 UHRF1BP1LA0JNW5 1464 aa27.01■■□□□ 1.91
SEMA3B-210ENST00000611067 GPATCH8Q9UKJ3 1502 aaKnown RBP27■■□□□ 1.91
SEMA3B-210ENST00000611067 CFDP1Q9UEE9 299 aaPredicted RBP26.99■■□□□ 1.91
SEMA3B-210ENST00000611067 HFM1A2PYH4 1435 aa26.97■■□□□ 1.91
SEMA3B-210ENST00000611067 ABCC10Q5T3U5 1492 aa26.97■■□□□ 1.91
SEMA3B-210ENST00000611067 FKBP8Q14318 412 aa26.95■■□□□ 1.91
SEMA3B-210ENST00000611067 CDC42BPAQ5VT25 1732 aa26.94■■□□□ 1.9
SEMA3B-210ENST00000611067 ZCCHC11Q5TAX3 1644 aaKnown RBP26.94■■□□□ 1.9
SEMA3B-210ENST00000611067 CAMSAP2Q08AD1 1489 aa26.93■■□□□ 1.9
SEMA3B-210ENST00000611067 BCANQ96GW7 911 aa26.93■■□□□ 1.9
SEMA3B-210ENST00000611067 KDM5BQ9UGL1 1544 aa26.92■■□□□ 1.9
SEMA3B-210ENST00000611067 DNMT1P26358 1616 aaKnown RBP26.92■■□□□ 1.9
SEMA3B-210ENST00000611067 ZNF644Q9H582 1327 aaPredicted RBP26.92■■□□□ 1.9
SEMA3B-210ENST00000611067 DAPK1P53355 1430 aa26.91■■□□□ 1.9
SEMA3B-210ENST00000611067 DDX10Q13206 875 aaKnown RBP26.91■■□□□ 1.9
SEMA3B-210ENST00000611067 NAIPQ13075 1403 aa26.9■■□□□ 1.9
SEMA3B-210ENST00000611067 CHIC2Q9UKJ5 165 aa26.89■■□□□ 1.9
SEMA3B-210ENST00000611067 ZNF777Q9ULD5 760 aaPredicted RBP26.89■■□□□ 1.9
SEMA3B-210ENST00000611067 PPP1R15AO75807 674 aaPredicted RBP26.88■■□□□ 1.89
SEMA3B-210ENST00000611067 AKNAQ7Z591 1439 aa26.88■■□□□ 1.89
SEMA3B-210ENST00000611067 TIMELESSQ9UNS1 1208 aa26.87■■□□□ 1.89
SEMA3B-210ENST00000611067 GCC2Q8IWJ2 1684 aa26.85■■□□□ 1.89
SEMA3B-210ENST00000611067 ABCC5O15440 1437 aa26.85■■□□□ 1.89
SEMA3B-210ENST00000611067 CCER2I3L3R5 266 aa26.83■■□□□ 1.89
SEMA3B-210ENST00000611067 RRP7BPQ9NSQ0 103 aa26.83■■□□□ 1.89
SEMA3B-210ENST00000611067 NEFLP07196 543 aa26.83■■□□□ 1.89
SEMA3B-210ENST00000611067 PREX2Q70Z35 1606 aa26.82■■□□□ 1.88
SEMA3B-210ENST00000611067 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.81■■□□□ 1.88
SEMA3B-210ENST00000611067 TTC37Q6PGP7 1564 aa26.8■■□□□ 1.88
SEMA3B-210ENST00000611067 SIN3AQ96ST3 1273 aa26.8■■□□□ 1.88
SEMA3B-210ENST00000611067 ROCK1Q13464 1354 aa26.8■■□□□ 1.88
SEMA3B-210ENST00000611067 CDC42BPBQ9Y5S2 1711 aa26.78■■□□□ 1.88
SEMA3B-210ENST00000611067 RBM19Q9Y4C8 960 aaKnown RBP26.77■■□□□ 1.88
SEMA3B-210ENST00000611067 CROCC2H7BZ55 1655 aa26.76■■□□□ 1.87
SEMA3B-210ENST00000611067 MYO5CQ9NQX4 1742 aa26.76■■□□□ 1.87
SEMA3B-210ENST00000611067 ADGBQ8N7X0 1667 aa26.73■■□□□ 1.87
SEMA3B-210ENST00000611067 ARHGAP5Q13017 1502 aa26.73■■□□□ 1.87
SEMA3B-210ENST00000611067 BCL11AQ9H165 835 aa26.72■■□□□ 1.87
SEMA3B-210ENST00000611067 ANP32CO43423 234 aa26.72■■□□□ 1.87
SEMA3B-210ENST00000611067 SAMD9LQ8IVG5 1584 aa26.7■■□□□ 1.86
SEMA3B-210ENST00000611067 WDR7Q9Y4E6 1490 aa26.7■■□□□ 1.86
SEMA3B-210ENST00000611067 SHANK2Q9UPX8 1470 aa26.68■■□□□ 1.86
SEMA3B-210ENST00000611067 ARHGEF5Q12774 1597 aa26.68■■□□□ 1.86
SEMA3B-210ENST00000611067 ADGRL2O95490 1459 aa26.67■■□□□ 1.86
SEMA3B-210ENST00000611067 KDM6BO15054 1643 aa26.67■■□□□ 1.86
SEMA3B-210ENST00000611067 TRIM52Q96A61 297 aa26.66■■□□□ 1.86
SEMA3B-210ENST00000611067 NCOA1Q15788 1441 aa26.65■■□□□ 1.86
SEMA3B-210ENST00000611067 NPM1P06748 294 aaKnown RBP eCLIP26.65■■□□□ 1.86
SEMA3B-210ENST00000611067 ANKRD30AQ9BXX3 1397 aa26.64■■□□□ 1.86
SEMA3B-210ENST00000611067 TSPY4P0CV99 314 aa26.63■■□□□ 1.85
SEMA3B-210ENST00000611067 TSPY10P0CW01 314 aa26.63■■□□□ 1.85
SEMA3B-210ENST00000611067 HNRNPMP52272 730 aaKnown RBP eCLIP26.63■■□□□ 1.85
SEMA3B-210ENST00000611067 PLCH2O75038 1416 aa26.63■■□□□ 1.85
SEMA3B-210ENST00000611067 C9orf84Q5VXU9 1444 aa26.63■■□□□ 1.85
SEMA3B-210ENST00000611067 MBD5Q9P267 1494 aa26.63■■□□□ 1.85
SEMA3B-210ENST00000611067 CCDC141Q6ZP82 1450 aa26.62■■□□□ 1.85
SEMA3B-210ENST00000611067 PLEKHH2Q8IVE3 1493 aa26.62■■□□□ 1.85
SEMA3B-210ENST00000611067 RSPH4AQ5TD94 716 aa26.62■■□□□ 1.85
SEMA3B-210ENST00000611067 ASXL2Q76L83 1435 aa26.61■■□□□ 1.85
SEMA3B-210ENST00000611067 SYCP2Q9BX26 1530 aa26.6■■□□□ 1.85
SEMA3B-210ENST00000611067 HIRIP3Q9BW71 556 aaPredicted RBP26.59■■□□□ 1.85
SEMA3B-210ENST00000611067 EFCAB2Q5VUJ9 269 aa26.57■■□□□ 1.84
SEMA3B-210ENST00000611067 KIAA1107Q9UPP5 1409 aa26.56■■□□□ 1.84
SEMA3B-210ENST00000611067 ARAP3Q8WWN8 1544 aa26.55■■□□□ 1.84
SEMA3B-210ENST00000611067 ABCA9Q8IUA7 1624 aa26.54■■□□□ 1.84
SEMA3B-210ENST00000611067 ANKRD50Q9ULJ7 1429 aa26.51■■□□□ 1.83
SEMA3B-210ENST00000611067 TONSLQ96HA7 1378 aa26.49■■□□□ 1.83
SEMA3B-210ENST00000611067 ABCC1P33527 1531 aa26.49■■□□□ 1.83
SEMA3B-210ENST00000611067 KIF15Q9NS87 1388 aa26.48■■□□□ 1.83
SEMA3B-210ENST00000611067 MAST1Q9Y2H9 1570 aa26.48■■□□□ 1.83
SEMA3B-210ENST00000611067 MPHOSPH9Q99550 1183 aa26.48■■□□□ 1.83
SEMA3B-210ENST00000611067 RIMBP3CA6NJZ7 1639 aa26.47■■□□□ 1.83
SEMA3B-210ENST00000611067 RIMBP3BA6NNM3 1639 aa26.47■■□□□ 1.83
SEMA3B-210ENST00000611067 RIMBP3Q9UFD9 1639 aa26.47■■□□□ 1.83
SEMA3B-210ENST00000611067 ARHGEF12Q9NZN5 1544 aa26.45■■□□□ 1.82
SEMA3B-210ENST00000611067 MSH5O43196 834 aa26.44■■□□□ 1.82
SEMA3B-210ENST00000611067 DENND4BO75064 1496 aaPredicted RBP26.44■■□□□ 1.82
SEMA3B-210ENST00000611067 FANCAO15360 1455 aa26.43■■□□□ 1.82
SEMA3B-210ENST00000611067 FANCIQ9NVI1 1328 aa26.43■■□□□ 1.82
SEMA3B-210ENST00000611067 CYB5RLQ6IPT4 315 aa26.42■■□□□ 1.82
SEMA3B-210ENST00000611067 SLC4A1APQ9BWU0 796 aaKnown RBP26.4■■□□□ 1.82
SEMA3B-210ENST00000611067 PLXNC1O60486 1568 aa26.39■■□□□ 1.82
SEMA3B-210ENST00000611067 TRAPPC8Q9Y2L5 1435 aa26.36■■□□□ 1.81
SEMA3B-210ENST00000611067 PZPP20742 1482 aa26.36■■□□□ 1.81
SEMA3B-210ENST00000611067 HNRNPUQ00839 825 aaKnown RBP eCLIP26.34■■□□□ 1.81
SEMA3B-210ENST00000611067 ADGRL1O94910 1474 aa26.33■■□□□ 1.81
SEMA3B-210ENST00000611067 ERICH6BQ5W0A0 696 aa26.32■■□□□ 1.8
SEMA3B-210ENST00000611067 CD109Q6YHK3 1445 aa26.32■■□□□ 1.8
SEMA3B-210ENST00000611067 FOXD1Q16676 465 aa26.31■■□□□ 1.8
SEMA3B-210ENST00000611067 NUP155O75694 1391 aa26.31■■□□□ 1.8
SEMA3B-210ENST00000611067 SPAG9O60271 1321 aaKnown RBP26.3■■□□□ 1.8
SEMA3B-210ENST00000611067 DUOX2Q9NRD8 1548 aa26.3■■□□□ 1.8
SEMA3B-210ENST00000611067 CFAP74Q9C0B2 1584 aa26.29■■□□□ 1.8
SEMA3B-210ENST00000611067 KDM5DQ9BY66 1539 aa26.29■■□□□ 1.8
SEMA3B-210ENST00000611067 SCAPERQ9BY12 1400 aa26.28■■□□□ 1.8
SEMA3B-210ENST00000611067 ANKRD30BQ9BXX2 1392 aa26.28■■□□□ 1.8
SEMA3B-210ENST00000611067 AFAP1Q8N556 730 aa26.27■■□□□ 1.8
SEMA3B-210ENST00000611067 RTEL1-TNFRSF6BF6WH68 1400 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms