RNA–Protein interactions for RNA: ENST00000609858.1

AC004948.1-201, humanhuman

BASIC

Gene AC004948.1, Length 672 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004948.1-201ENST00000609858 PDS5BQ9NTI5 1447 aa11.42□□□□□ -0.58
AC004948.1-201ENST00000609858 PDCD7Q8N8D1 485 aaKnown RBP11.41□□□□□ -0.58
AC004948.1-201ENST00000609858 ARAP1Q96P48 1450 aa11.4□□□□□ -0.58
AC004948.1-201ENST00000609858 CDAN1Q8IWY9 1227 aa11.4□□□□□ -0.58
AC004948.1-201ENST00000609858 SNPHO15079 494 aa11.39□□□□□ -0.59
AC004948.1-201ENST00000609858 L3MBTL3Q96JM7 780 aaPredicted RBP11.39□□□□□ -0.59
AC004948.1-201ENST00000609858 CABP2Q9NPB3 220 aa11.37□□□□□ -0.59
AC004948.1-201ENST00000609858 G3V3G9 751 aa11.34□□□□□ -0.59
AC004948.1-201ENST00000609858 TMEM121BQ9BXQ6 578 aaPredicted RBP11.32□□□□□ -0.6
AC004948.1-201ENST00000609858 BAZ1BQ9UIG0 1483 aaKnown RBP11.31□□□□□ -0.6
AC004948.1-201ENST00000609858 MARVELD3Q96A59 401 aa11.3□□□□□ -0.6
AC004948.1-201ENST00000609858 SMARCA4P51532 1647 aa11.28□□□□□ -0.6
AC004948.1-201ENST00000609858 PKD2Q13563 968 aa11.27□□□□□ -0.61
AC004948.1-201ENST00000609858 DPY19L2Q6NUT2 758 aa11.27□□□□□ -0.61
AC004948.1-201ENST00000609858 CHD1O14646 1710 aa11.24□□□□□ -0.61
AC004948.1-201ENST00000609858 BOLA1Q9Y3E2 137 aa11.24□□□□□ -0.61
AC004948.1-201ENST00000609858 EMP3P54852 163 aa11.23□□□□□ -0.61
AC004948.1-201ENST00000609858 CEP164Q9UPV0 1460 aa11.2□□□□□ -0.62
AC004948.1-201ENST00000609858 EFCAB3Q8N7B9 438 aa11.2□□□□□ -0.62
AC004948.1-201ENST00000609858 CADPSQ9ULU8 1353 aa11.19□□□□□ -0.62
AC004948.1-201ENST00000609858 ZNF608Q9ULD9 1512 aaPredicted RBP11.16□□□□□ -0.62
AC004948.1-201ENST00000609858 RIOK3O14730 519 aaKnown RBP11.15□□□□□ -0.62
AC004948.1-201ENST00000609858 FAM205CA6NFA0 338 aa11.14□□□□□ -0.63
AC004948.1-201ENST00000609858 URB2Q14146 1524 aaKnown RBP11.14□□□□□ -0.63
AC004948.1-201ENST00000609858 KDM4FA0A1W2PPD8 638 aa11.13□□□□□ -0.63
AC004948.1-201ENST00000609858 ZNF710Q8N1W2 664 aa11.12□□□□□ -0.63
AC004948.1-201ENST00000609858 FANCD2Q9BXW9 1451 aa11.12□□□□□ -0.63
AC004948.1-201ENST00000609858 PEG3Q9GZU2 1588 aa11.11□□□□□ -0.63
AC004948.1-201ENST00000609858 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.11□□□□□ -0.63
AC004948.1-201ENST00000609858 ZFP91Q96JP5 570 aaPredicted RBP11.11□□□□□ -0.63
AC004948.1-201ENST00000609858 HS3ST6Q96QI5 342 aa11.11□□□□□ -0.63
AC004948.1-201ENST00000609858 RSF1Q96T23 1441 aaPredicted RBP11.1□□□□□ -0.63
AC004948.1-201ENST00000609858 VGFO15240 615 aaPredicted RBP11.1□□□□□ -0.63
AC004948.1-201ENST00000609858 SPNS2Q8IVW8 549 aa11.1□□□□□ -0.63
AC004948.1-201ENST00000609858 RNF25Q96BH1 459 aaPredicted RBP11.1□□□□□ -0.63
AC004948.1-201ENST00000609858 DOK7Q18PE1 504 aa11.08□□□□□ -0.64
AC004948.1-201ENST00000609858 MMRN1Q13201 1228 aa11.07□□□□□ -0.64
AC004948.1-201ENST00000609858 EIF4G3O43432 1585 aaKnown RBP11.07□□□□□ -0.64
AC004948.1-201ENST00000609858 ECM2O94769 699 aaPredicted RBP11.06□□□□□ -0.64
AC004948.1-201ENST00000609858 HOXB3P14651 431 aaPredicted RBP11.06□□□□□ -0.64
AC004948.1-201ENST00000609858 MICALL2Q8IY33 904 aa11.06□□□□□ -0.64
AC004948.1-201ENST00000609858 KIF13AQ9H1H9 1805 aa11.06□□□□□ -0.64
AC004948.1-201ENST00000609858 SOX12O15370 315 aa11.05□□□□□ -0.64
AC004948.1-201ENST00000609858 LMTK3Q96Q04 1460 aa11.05□□□□□ -0.64
AC004948.1-201ENST00000609858 RIMBP2O15034 1052 aa11.04□□□□□ -0.64
AC004948.1-201ENST00000609858 PHF8Q9UPP1 1060 aa11.04□□□□□ -0.64
AC004948.1-201ENST00000609858 POTEB3A0JP26 581 aa11.03□□□□□ -0.64
AC004948.1-201ENST00000609858 RGL2O15211 777 aa11.03□□□□□ -0.64
AC004948.1-201ENST00000609858 POTEBQ6S5H4 581 aa11.03□□□□□ -0.64
AC004948.1-201ENST00000609858 ERCC6L2Q5T890 1561 aa11.03□□□□□ -0.64
AC004948.1-201ENST00000609858 TAOK2Q9UL54 1235 aa11.01□□□□□ -0.65
AC004948.1-201ENST00000609858 HECW2Q9P2P5 1572 aa11.01□□□□□ -0.65
AC004948.1-201ENST00000609858 ERBB3P21860 1342 aa11.01□□□□□ -0.65
AC004948.1-201ENST00000609858 HOXB1P14653 301 aaPredicted RBP11□□□□□ -0.65
AC004948.1-201ENST00000609858 FBXO41Q8TF61 875 aa11□□□□□ -0.65
AC004948.1-201ENST00000609858 ILDR2Q71H61 639 aa10.99□□□□□ -0.65
AC004948.1-201ENST00000609858 MS4A4AQ96JQ5 239 aa10.99□□□□□ -0.65
AC004948.1-201ENST00000609858 KRTAP3-3Q9BYR6 98 aa10.99□□□□□ -0.65
AC004948.1-201ENST00000609858 KRTAP3-2Q9BYR7 98 aa10.99□□□□□ -0.65
AC004948.1-201ENST00000609858 BCL11BQ9C0K0 894 aaPredicted RBP10.99□□□□□ -0.65
AC004948.1-201ENST00000609858 STK24Q9Y6E0 443 aa10.98□□□□□ -0.65
AC004948.1-201ENST00000609858 IFT140Q96RY7 1462 aa10.98□□□□□ -0.65
AC004948.1-201ENST00000609858 TMEM92Q6UXU6 159 aa10.97□□□□□ -0.65
AC004948.1-201ENST00000609858 CLASP1Q7Z460 1538 aa10.97□□□□□ -0.65
AC004948.1-201ENST00000609858 SOCS7O14512 581 aa10.96□□□□□ -0.65
AC004948.1-201ENST00000609858 MROH2BQ7Z745 1585 aa10.95□□□□□ -0.66
AC004948.1-201ENST00000609858 NLRP6P59044 892 aa10.95□□□□□ -0.66
AC004948.1-201ENST00000609858 STK25O00506 426 aa10.93□□□□□ -0.66
AC004948.1-201ENST00000609858 VARS2Q5ST30 1063 aaKnown RBP10.93□□□□□ -0.66
AC004948.1-201ENST00000609858 AQRO60306 1485 aaKnown RBP eCLIP10.93□□□□□ -0.66
AC004948.1-201ENST00000609858 GAPVD1Q14C86 1478 aa10.9□□□□□ -0.66
AC004948.1-201ENST00000609858 ZSWIM6Q9HCJ5 1215 aa10.9□□□□□ -0.66
AC004948.1-201ENST00000609858 CFTRP13569 1480 aa10.89□□□□□ -0.67
AC004948.1-201ENST00000609858 PRDM2Q13029 1718 aa10.87□□□□□ -0.67
AC004948.1-201ENST00000609858 FBXO22Q8NEZ5 403 aa10.87□□□□□ -0.67
AC004948.1-201ENST00000609858 KDM6BO15054 1643 aa10.85□□□□□ -0.67
AC004948.1-201ENST00000609858 MFRPQ9BY79 579 aa10.85□□□□□ -0.67
AC004948.1-201ENST00000609858 TARBP1Q13395 1621 aaKnown RBP10.84□□□□□ -0.67
AC004948.1-201ENST00000609858 WIZO95785 1651 aa10.84□□□□□ -0.67
AC004948.1-201ENST00000609858 SYNJ1O43426 1573 aa10.83□□□□□ -0.68
AC004948.1-201ENST00000609858 ARSIQ5FYB1 569 aa10.83□□□□□ -0.68
AC004948.1-201ENST00000609858 GPR153Q6NV75 609 aa10.83□□□□□ -0.68
AC004948.1-201ENST00000609858 TOPBP1Q92547 1522 aa10.83□□□□□ -0.68
AC004948.1-201ENST00000609858 TSPOAP1O95153 1857 aa10.83□□□□□ -0.68
AC004948.1-201ENST00000609858 SYNJ2O15056 1496 aa10.82□□□□□ -0.68
AC004948.1-201ENST00000609858 ADGRL1O94910 1474 aa10.82□□□□□ -0.68
AC004948.1-201ENST00000609858 DISP3Q9P2K9 1392 aa10.79□□□□□ -0.68
AC004948.1-201ENST00000609858 ZNF687Q8N1G0 1237 aa10.79□□□□□ -0.68
AC004948.1-201ENST00000609858 KHSRPQ92945 711 aaKnown RBP eCLIP10.78□□□□□ -0.68
AC004948.1-201ENST00000609858 RNF166Q96A37 237 aaPredicted RBP10.78□□□□□ -0.68
AC004948.1-201ENST00000609858 SNAPC4Q5SXM2 1469 aa10.77□□□□□ -0.69
AC004948.1-201ENST00000609858 C2orf72A6NCS6 295 aa10.77□□□□□ -0.69
AC004948.1-201ENST00000609858 CHGAP10645 457 aaKnown RBP10.77□□□□□ -0.69
AC004948.1-201ENST00000609858 HS6ST3Q8IZP7 471 aa10.76□□□□□ -0.69
AC004948.1-201ENST00000609858 TMC2Q8TDI7 906 aa10.75□□□□□ -0.69
AC004948.1-201ENST00000609858 MYT1LQ9UL68 1186 aa10.75□□□□□ -0.69
AC004948.1-201ENST00000609858 ZNF316A6NFI3 1004 aaPredicted RBP10.74□□□□□ -0.69
AC004948.1-201ENST00000609858 FAM69CQ0P6D2 419 aa10.72□□□□□ -0.69
AC004948.1-201ENST00000609858 ANKRD13DQ6ZTN6 518 aa10.72□□□□□ -0.69
AC004948.1-201ENST00000609858 KIF3CO14782 793 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms