RNA–Protein interactions for RNA: ENST00000609752.1

LINC00484-208, long intergenic non-protein coding RNA 484, human

TSL 4 BASIC

Gene LINC00484, Length 591 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00484-208	ENST00000609752	ERCC6L2	Q5T890	1561 aa		11.98	□□□□□ -0.49
LINC00484-208	ENST00000609752	ATN1	P54259	1190 aa	Predicted RBP	11.97	□□□□□ -0.49
LINC00484-208	ENST00000609752	TOPBP1	Q92547	1522 aa		11.96	□□□□□ -0.49
LINC00484-208	ENST00000609752	TRIM35	Q9UPQ4	493 aa		11.95	□□□□□ -0.5
LINC00484-208	ENST00000609752	STK25	O00506	426 aa		11.93	□□□□□ -0.5
LINC00484-208	ENST00000609752	GAPVD1	Q14C86	1478 aa		11.93	□□□□□ -0.5
LINC00484-208	ENST00000609752	AQR	O60306	1485 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
LINC00484-208	ENST00000609752	GOLGA2	Q08379	1002 aa		11.92	□□□□□ -0.5
LINC00484-208	ENST00000609752	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.92	□□□□□ -0.5
LINC00484-208	ENST00000609752	IER5L	Q5T953	404 aa		11.91	□□□□□ -0.5
LINC00484-208	ENST00000609752	PELP1	Q8IZL8	1130 aa	Known RBP	11.91	□□□□□ -0.5
LINC00484-208	ENST00000609752	HS6ST3	Q8IZP7	471 aa		11.91	□□□□□ -0.5
LINC00484-208	ENST00000609752	DNMBP	Q6XZF7	1577 aa		11.91	□□□□□ -0.5
LINC00484-208	ENST00000609752	SLC39A7	Q92504	469 aa		11.9	□□□□□ -0.5
LINC00484-208	ENST00000609752	CABP2	Q9NPB3	220 aa		11.9	□□□□□ -0.5
LINC00484-208	ENST00000609752	STK24	Q9Y6E0	443 aa		11.9	□□□□□ -0.5
LINC00484-208	ENST00000609752	ABCC8	Q09428	1581 aa		11.89	□□□□□ -0.51
LINC00484-208	ENST00000609752	C7	P10643	843 aa		11.89	□□□□□ -0.51
LINC00484-208	ENST00000609752	KDM4F	A0A1W2PPD8	638 aa		11.88	□□□□□ -0.51
LINC00484-208	ENST00000609752	CHGA	P10645	457 aa	Known RBP	11.88	□□□□□ -0.51
LINC00484-208	ENST00000609752	HECW2	Q9P2P5	1572 aa		11.88	□□□□□ -0.51
LINC00484-208	ENST00000609752	WDR97	A6NE52	1622 aa		11.87	□□□□□ -0.51
LINC00484-208	ENST00000609752	MKRN3	Q13064	507 aa	Known RBP	11.87	□□□□□ -0.51
LINC00484-208	ENST00000609752	SNAPC4	Q5SXM2	1469 aa		11.86	□□□□□ -0.51
LINC00484-208	ENST00000609752	KDM6B	O15054	1643 aa		11.85	□□□□□ -0.51
LINC00484-208	ENST00000609752	POTEB2	H3BUK9	544 aa		11.84	□□□□□ -0.51
LINC00484-208	ENST00000609752	METRN	Q9UJH8	293 aa		11.84	□□□□□ -0.51
LINC00484-208	ENST00000609752	EFCAB3	Q8N7B9	438 aa		11.82	□□□□□ -0.52
LINC00484-208	ENST00000609752	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.82	□□□□□ -0.52
LINC00484-208	ENST00000609752	TOP2A	P11388	1531 aa	Known RBP	11.81	□□□□□ -0.52
LINC00484-208	ENST00000609752	SOX12	O15370	315 aa		11.81	□□□□□ -0.52
LINC00484-208	ENST00000609752	IRX5	P78411	483 aa	Predicted RBP	11.79	□□□□□ -0.52
LINC00484-208	ENST00000609752	POLA1	P09884	1462 aa	Predicted RBP	11.78	□□□□□ -0.52
LINC00484-208	ENST00000609752	LMTK3	Q96Q04	1460 aa		11.78	□□□□□ -0.52
LINC00484-208	ENST00000609752	SEC24B	O95487	1268 aa		11.78	□□□□□ -0.52
LINC00484-208	ENST00000609752	FBXO41	Q8TF61	875 aa		11.78	□□□□□ -0.52
LINC00484-208	ENST00000609752	OTUD5	Q96G74	571 aa		11.78	□□□□□ -0.52
LINC00484-208	ENST00000609752	OCEL1	Q9H607	264 aa		11.78	□□□□□ -0.52
LINC00484-208	ENST00000609752	PBRM1	Q86U86	1689 aa		11.78	□□□□□ -0.52
LINC00484-208	ENST00000609752	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
LINC00484-208	ENST00000609752	SYNJ2	O15056	1496 aa		11.76	□□□□□ -0.53
LINC00484-208	ENST00000609752	PLCG2	P16885	1265 aa		11.76	□□□□□ -0.53
LINC00484-208	ENST00000609752	DIP2B	Q9P265	1576 aa		11.75	□□□□□ -0.53
LINC00484-208	ENST00000609752	ADGRL1	O94910	1474 aa		11.73	□□□□□ -0.53
LINC00484-208	ENST00000609752	TSPOAP1	O95153	1857 aa		11.73	□□□□□ -0.53
LINC00484-208	ENST00000609752	NLRP6	P59044	892 aa		11.73	□□□□□ -0.53
LINC00484-208	ENST00000609752	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.73	□□□□□ -0.53
LINC00484-208	ENST00000609752	BBX	Q8WY36	941 aa	Predicted RBP	11.73	□□□□□ -0.53
LINC00484-208	ENST00000609752	COLQ	Q9Y215	455 aa	Predicted RBP	11.73	□□□□□ -0.53
LINC00484-208	ENST00000609752	POTEF	A5A3E0	1075 aa		11.72	□□□□□ -0.53
LINC00484-208	ENST00000609752	PDCD7	Q8N8D1	485 aa	Known RBP	11.71	□□□□□ -0.53
LINC00484-208	ENST00000609752	MFRP	Q9BY79	579 aa		11.71	□□□□□ -0.53
LINC00484-208	ENST00000609752	RYDEN	Q9NUL5	291 aa	Known RBP	11.71	□□□□□ -0.53
LINC00484-208	ENST00000609752	CEP170	Q5SW79	1584 aa		11.71	□□□□□ -0.54
LINC00484-208	ENST00000609752	ABCC10	Q5T3U5	1492 aa		11.7	□□□□□ -0.54
LINC00484-208	ENST00000609752	NKX1-1	Q15270	411 aa	Predicted RBP	11.7	□□□□□ -0.54
LINC00484-208	ENST00000609752	PHF8	Q9UPP1	1060 aa		11.7	□□□□□ -0.54
LINC00484-208	ENST00000609752	GRIN2B	Q13224	1484 aa		11.7	□□□□□ -0.54
LINC00484-208	ENST00000609752	RAD54L2	Q9Y4B4	1467 aa		11.7	□□□□□ -0.54
LINC00484-208	ENST00000609752	SHROOM2	Q13796	1616 aa		11.69	□□□□□ -0.54
LINC00484-208	ENST00000609752	FBXO22	Q8NEZ5	403 aa		11.69	□□□□□ -0.54
LINC00484-208	ENST00000609752	TDRD9	Q8NDG6	1382 aa	Known RBP	11.68	□□□□□ -0.54
LINC00484-208	ENST00000609752	MAPKBP1	O60336	1514 aa		11.67	□□□□□ -0.54
LINC00484-208	ENST00000609752	POTEJ	P0CG39	1038 aa		11.67	□□□□□ -0.54
LINC00484-208	ENST00000609752	PLSCR2	Q9NRY7	297 aa		11.67	□□□□□ -0.54
LINC00484-208	ENST00000609752	MS4A4A	Q96JQ5	239 aa		11.65	□□□□□ -0.54
LINC00484-208	ENST00000609752	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.65	□□□□□ -0.54
LINC00484-208	ENST00000609752	SOGA1	O94964	1423 aa		11.64	□□□□□ -0.55
LINC00484-208	ENST00000609752	SOCS7	O14512	581 aa		11.64	□□□□□ -0.55
LINC00484-208	ENST00000609752	MAMSTR	Q6ZN01	415 aa		11.63	□□□□□ -0.55
LINC00484-208	ENST00000609752	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.63	□□□□□ -0.55
LINC00484-208	ENST00000609752	FAM69C	Q0P6D2	419 aa		11.61	□□□□□ -0.55
LINC00484-208	ENST00000609752	FGD5	Q6ZNL6	1462 aa		11.6	□□□□□ -0.55
LINC00484-208	ENST00000609752	GTPBP6	O43824	516 aa	Predicted RBP	11.6	□□□□□ -0.55
LINC00484-208	ENST00000609752	DPY19L2	Q6NUT2	758 aa		11.6	□□□□□ -0.55
LINC00484-208	ENST00000609752	CCDC88B	A6NC98	1476 aa		11.58	□□□□□ -0.56
LINC00484-208	ENST00000609752		G3V3G9	751 aa		11.58	□□□□□ -0.56
LINC00484-208	ENST00000609752	BOLA1	Q9Y3E2	137 aa		11.58	□□□□□ -0.56
LINC00484-208	ENST00000609752	ABCA5	Q8WWZ7	1642 aa		11.57	□□□□□ -0.56
LINC00484-208	ENST00000609752	GRIN2A	Q12879	1464 aa		11.57	□□□□□ -0.56
LINC00484-208	ENST00000609752	SCUBE2	Q9NQ36	999 aa		11.56	□□□□□ -0.56
LINC00484-208	ENST00000609752	PPRC1	Q5VV67	1664 aa	Known RBP	11.55	□□□□□ -0.56
LINC00484-208	ENST00000609752	SPRYD3	Q8NCJ5	442 aa		11.55	□□□□□ -0.56
LINC00484-208	ENST00000609752	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.55	□□□□□ -0.56
LINC00484-208	ENST00000609752	ADAMTS12	P58397	1594 aa		11.54	□□□□□ -0.56
LINC00484-208	ENST00000609752	NUP160	Q12769	1436 aa		11.54	□□□□□ -0.56
LINC00484-208	ENST00000609752	TOP2B	Q02880	1626 aa		11.54	□□□□□ -0.56
LINC00484-208	ENST00000609752	ADCY10	Q96PN6	1610 aa		11.54	□□□□□ -0.56
LINC00484-208	ENST00000609752	PPP1R37	O75864	691 aa		11.52	□□□□□ -0.57
LINC00484-208	ENST00000609752	ILDR2	Q71H61	639 aa		11.52	□□□□□ -0.57
LINC00484-208	ENST00000609752	MICALL2	Q8IY33	904 aa		11.52	□□□□□ -0.57
LINC00484-208	ENST00000609752	C3orf67	Q6ZVT6	689 aa		11.51	□□□□□ -0.57
LINC00484-208	ENST00000609752	SPATA31D1	Q6ZQQ2	1576 aa		11.5	□□□□□ -0.57
LINC00484-208	ENST00000609752	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.5	□□□□□ -0.57
LINC00484-208	ENST00000609752	DISP3	Q9P2K9	1392 aa		11.5	□□□□□ -0.57
LINC00484-208	ENST00000609752	CFAP44	Q96MT7	982 aa		11.48	□□□□□ -0.57
LINC00484-208	ENST00000609752	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.48	□□□□□ -0.57
LINC00484-208	ENST00000609752	CUX1	P39880	1505 aa		11.46	□□□□□ -0.57
LINC00484-208	ENST00000609752	PRG4	Q92954	1404 aa	Predicted RBP	11.44	□□□□□ -0.58
LINC00484-208	ENST00000609752	PLCB2	Q00722	1185 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms