RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 ABCC5O15440 1437 aa22.66■■□□□ 1.22
CTSA-214ENST00000606788 DAPK1P53355 1430 aa22.66■■□□□ 1.22
CTSA-214ENST00000606788 PTPRGP23470 1445 aa22.66■■□□□ 1.22
CTSA-214ENST00000606788 MIA2Q96PC5 1412 aa22.66■■□□□ 1.22
CTSA-214ENST00000606788 KIF14Q15058 1648 aa22.66■■□□□ 1.22
CTSA-214ENST00000606788 TCOF1Q13428 1488 aaKnown RBP22.66■■□□□ 1.22
CTSA-214ENST00000606788 HNRNPMP52272 730 aaKnown RBP eCLIP22.64■■□□□ 1.22
CTSA-214ENST00000606788 ZNF326Q5BKZ1 582 aaKnown RBP22.6■■□□□ 1.21
CTSA-214ENST00000606788 ATP10BO94823 1461 aa22.6■■□□□ 1.21
CTSA-214ENST00000606788 GPATCH8Q9UKJ3 1502 aaKnown RBP22.59■■□□□ 1.21
CTSA-214ENST00000606788 L3MBTL2Q969R5 705 aa22.59■■□□□ 1.21
CTSA-214ENST00000606788 DENND4BO75064 1496 aaPredicted RBP22.57■■□□□ 1.2
CTSA-214ENST00000606788 CAMSAP2Q08AD1 1489 aa22.57■■□□□ 1.2
CTSA-214ENST00000606788 CNGB1Q14028 1251 aaPredicted RBP22.54■■□□□ 1.2
CTSA-214ENST00000606788 TIMELESSQ9UNS1 1208 aa22.54■■□□□ 1.2
CTSA-214ENST00000606788 ERCC6L2Q5T890 1561 aa22.53■■□□□ 1.2
CTSA-214ENST00000606788 CHD1O14646 1710 aa22.53■■□□□ 1.2
CTSA-214ENST00000606788 TSPY4P0CV99 314 aa22.49■■□□□ 1.19
CTSA-214ENST00000606788 TSPY10P0CW01 314 aa22.49■■□□□ 1.19
CTSA-214ENST00000606788 PKD2Q13563 968 aa22.48■■□□□ 1.19
CTSA-214ENST00000606788 HSPA5P11021 654 aaKnown RBP22.48■■□□□ 1.19
CTSA-214ENST00000606788 AKNAQ7Z591 1439 aa22.46■■□□□ 1.19
CTSA-214ENST00000606788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.46■■□□□ 1.195e-7■□□□□ 10.4
CTSA-214ENST00000606788 ABCA8O94911 1581 aa22.46■■□□□ 1.19
CTSA-214ENST00000606788 DNMT1P26358 1616 aaKnown RBP22.46■■□□□ 1.19
CTSA-214ENST00000606788 POLR3GLQ9BT43 218 aa22.46■■□□□ 1.19
CTSA-214ENST00000606788 GCC2Q8IWJ2 1684 aa22.46■■□□□ 1.19
CTSA-214ENST00000606788 NCOA1Q15788 1441 aa22.45■■□□□ 1.18
CTSA-214ENST00000606788 NBPF8Q3BBV2 869 aa22.44■■□□□ 1.18
CTSA-214ENST00000606788 ROCK1Q13464 1354 aa22.42■■□□□ 1.18
CTSA-214ENST00000606788 ANKRD30AQ9BXX3 1397 aa22.41■■□□□ 1.18
CTSA-214ENST00000606788 NUP155O75694 1391 aa22.4■■□□□ 1.18
CTSA-214ENST00000606788 KDM2AQ9Y2K7 1162 aa22.39■■□□□ 1.18
CTSA-214ENST00000606788 ANP32CO43423 234 aa22.39■■□□□ 1.17
CTSA-214ENST00000606788 ANKRD30BQ9BXX2 1392 aa22.39■■□□□ 1.17
CTSA-214ENST00000606788 ANKRD50Q9ULJ7 1429 aa22.37■■□□□ 1.17
CTSA-214ENST00000606788 KDM5BQ9UGL1 1544 aa22.37■■□□□ 1.17
CTSA-214ENST00000606788 C9orf84Q5VXU9 1444 aa22.36■■□□□ 1.17
CTSA-214ENST00000606788 ABCC10Q5T3U5 1492 aa22.36■■□□□ 1.17
CTSA-214ENST00000606788 EIF4G2P78344 907 aaKnown RBP eCLIP22.36■■□□□ 1.17
CTSA-214ENST00000606788 C11orf95C9JLR9 678 aaPredicted RBP22.34■■□□□ 1.17
CTSA-214ENST00000606788 ITSN2Q9NZM3 1697 aa22.33■■□□□ 1.17
CTSA-214ENST00000606788 CDC42BPAQ5VT25 1732 aa22.33■■□□□ 1.17
CTSA-214ENST00000606788 WASHC2AQ641Q2 1341 aa22.33■■□□□ 1.16
CTSA-214ENST00000606788 KIF15Q9NS87 1388 aa22.33■■□□□ 1.16
CTSA-214ENST00000606788 PZPP20742 1482 aa22.32■■□□□ 1.16
CTSA-214ENST00000606788 MYT1LQ9UL68 1186 aa22.3■■□□□ 1.16
CTSA-214ENST00000606788 RGL3Q3MIN7 710 aa22.29■■□□□ 1.16
CTSA-214ENST00000606788 ARHGAP5Q13017 1502 aa22.27■■□□□ 1.16
CTSA-214ENST00000606788 ADCY10Q96PN6 1610 aa22.27■■□□□ 1.15
CTSA-214ENST00000606788 RPRD2Q5VT52 1461 aaKnown RBP22.25■■□□□ 1.15
CTSA-214ENST00000606788 TTC37Q6PGP7 1564 aa22.22■■□□□ 1.15
CTSA-214ENST00000606788 SYCP2Q9BX26 1530 aa22.21■■□□□ 1.15
CTSA-214ENST00000606788 DCAF11Q8TEB1 546 aa22.21■■□□□ 1.15
CTSA-214ENST00000606788 KIAA1107Q9UPP5 1409 aa22.21■■□□□ 1.15
CTSA-214ENST00000606788 AFAP1Q8N556 730 aa22.2■■□□□ 1.14
CTSA-214ENST00000606788 MBD5Q9P267 1494 aa22.2■■□□□ 1.14
CTSA-214ENST00000606788 SENP3-EIF4A1A0A087X0R7 540 aa22.2■■□□□ 1.14
CTSA-214ENST00000606788 SAMD9LQ8IVG5 1584 aa22.19■■□□□ 1.14
CTSA-214ENST00000606788 BCANQ96GW7 911 aa22.19■■□□□ 1.14
CTSA-214ENST00000606788 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.18■■□□□ 1.14
CTSA-214ENST00000606788 ADGRL2O95490 1459 aa22.18■■□□□ 1.14
CTSA-214ENST00000606788 TEX14Q8IWB6 1497 aa22.18■■□□□ 1.14
CTSA-214ENST00000606788 ABCC2Q92887 1545 aa22.17■■□□□ 1.14
CTSA-214ENST00000606788 CDC42BPBQ9Y5S2 1711 aa22.17■■□□□ 1.14
CTSA-214ENST00000606788 CCDC184Q52MB2 194 aa22.17■■□□□ 1.14
CTSA-214ENST00000606788 ADGBQ8N7X0 1667 aa22.16■■□□□ 1.14
CTSA-214ENST00000606788 CCDC141Q6ZP82 1450 aa22.16■■□□□ 1.14
CTSA-214ENST00000606788 CROCC2H7BZ55 1655 aa22.15■■□□□ 1.14
CTSA-214ENST00000606788 SHROOM2Q13796 1616 aa22.14■■□□□ 1.13
CTSA-214ENST00000606788 EFCAB2Q5VUJ9 269 aa22.14■■□□□ 1.13
CTSA-214ENST00000606788 CARD11Q9BXL7 1154 aa22.11■■□□□ 1.13
CTSA-214ENST00000606788 KIF7Q2M1P5 1343 aa22.11■■□□□ 1.13
CTSA-214ENST00000606788 PLEKHH2Q8IVE3 1493 aa22.1■■□□□ 1.13
CTSA-214ENST00000606788 ARHGEF12Q9NZN5 1544 aa22.09■■□□□ 1.13
CTSA-214ENST00000606788 FAM9BQ8IZU0 186 aa22.09■■□□□ 1.13
CTSA-214ENST00000606788 CCDC7Q96M83 1385 aa22.08■■□□□ 1.13
CTSA-214ENST00000606788 HNRNPUQ00839 825 aaKnown RBP eCLIP22.08■■□□□ 1.13
CTSA-214ENST00000606788 PREX2Q70Z35 1606 aa22.08■■□□□ 1.12
CTSA-214ENST00000606788 TRAPPC8Q9Y2L5 1435 aa22.07■■□□□ 1.12
CTSA-214ENST00000606788 CLASP1Q7Z460 1538 aa22.07■■□□□ 1.12
CTSA-214ENST00000606788 SUPT16HQ9Y5B9 1047 aaKnown RBP22.06■■□□□ 1.12
CTSA-214ENST00000606788 USP47Q96K76 1375 aa22.06■■□□□ 1.12
CTSA-214ENST00000606788 SHANK2Q9UPX8 1470 aa22.06■■□□□ 1.12
CTSA-214ENST00000606788 CCER2I3L3R5 266 aa22.05■■□□□ 1.12
CTSA-214ENST00000606788 ZCCHC11Q5TAX3 1644 aaKnown RBP22.05■■□□□ 1.12
CTSA-214ENST00000606788 RSPH4AQ5TD94 716 aa22.05■■□□□ 1.12
CTSA-214ENST00000606788 SPAG9O60271 1321 aaKnown RBP22.03■■□□□ 1.12
CTSA-214ENST00000606788 ST20-MTHFSA0A0A6YYL1 179 aa22.03■■□□□ 1.12
CTSA-214ENST00000606788 NBPF1Q3BBV0 1214 aa22.02■■□□□ 1.12
CTSA-214ENST00000606788 OSCARQ8IYS5 282 aa22.01■■□□□ 1.11
CTSA-214ENST00000606788 PLCH2O75038 1416 aa22■■□□□ 1.11
CTSA-214ENST00000606788 FKBP8Q14318 412 aa22■■□□□ 1.11
CTSA-214ENST00000606788 MRS2Q9HD23 443 aa22■■□□□ 1.11
CTSA-214ENST00000606788 ARHGEF5Q12774 1597 aa21.99■■□□□ 1.11
CTSA-214ENST00000606788 FAM135AQ9P2D6 1515 aa21.99■■□□□ 1.11
CTSA-214ENST00000606788 PRKRIP1Q9H875 184 aaPredicted RBP21.98■■□□□ 1.11
CTSA-214ENST00000606788 MYO5CQ9NQX4 1742 aa21.97■■□□□ 1.11
CTSA-214ENST00000606788 CCDC144AA2RUR9 1427 aa21.97■■□□□ 1.11
CTSA-214ENST00000606788 CNTLNQ9NXG0 1405 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms