RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 RANGAP1P46060 587 aaPredicted RBP22.43■■□□□ 1.18
CTSA-212ENST00000606394 ARHGEF12Q9NZN5 1544 aa22.42■■□□□ 1.18
CTSA-212ENST00000606394 ATP10AO60312 1499 aa22.42■■□□□ 1.18
CTSA-212ENST00000606394 MLECQ14165 292 aa22.41■■□□□ 1.18
CTSA-212ENST00000606394 C9orf84Q5VXU9 1444 aa22.4■■□□□ 1.18
CTSA-212ENST00000606394 PREX1Q8TCU6 1659 aa22.39■■□□□ 1.18
CTSA-212ENST00000606394 DMRT2Q9Y5R5 561 aa22.39■■□□□ 1.17
CTSA-212ENST00000606394 EFCAB2Q5VUJ9 269 aa22.36■■□□□ 1.17
CTSA-212ENST00000606394 CDK13Q14004 1512 aaKnown RBP22.36■■□□□ 1.17
CTSA-212ENST00000606394 SETD1BQ9UPS6 1966 aaKnown RBP22.32■■□□□ 1.16
CTSA-212ENST00000606394 CDK11AQ9UQ88 783 aaPredicted RBP22.32■■□□□ 1.16
CTSA-212ENST00000606394 ZNF518AQ6AHZ1 1483 aa22.32■■□□□ 1.16
CTSA-212ENST00000606394 MYO5CQ9NQX4 1742 aa22.31■■□□□ 1.16
CTSA-212ENST00000606394 FMN1Q68DA7 1419 aa22.3■■□□□ 1.16
CTSA-212ENST00000606394 UHRF1BP1Q6BDS2 1440 aa22.29■■□□□ 1.16
CTSA-212ENST00000606394 KDM5CP41229 1560 aa22.28■■□□□ 1.16
CTSA-212ENST00000606394 STRCQ7RTU9 1775 aa22.27■■□□□ 1.16
CTSA-212ENST00000606394 CEBPAP49715 358 aaPredicted RBP22.27■■□□□ 1.16
CTSA-212ENST00000606394 DISP3Q9P2K9 1392 aa22.25■■□□□ 1.15
CTSA-212ENST00000606394 REREQ9P2R6 1566 aa22.25■■□□□ 1.15
CTSA-212ENST00000606394 KIF14Q15058 1648 aa22.24■■□□□ 1.15
CTSA-212ENST00000606394 PTPRTO14522 1441 aa22.23■■□□□ 1.15
CTSA-212ENST00000606394 SOCS7O14512 581 aa22.22■■□□□ 1.15
CTSA-212ENST00000606394 AFAP1Q8N556 730 aa22.22■■□□□ 1.15
CTSA-212ENST00000606394 TROQ12816 1431 aaPredicted RBP22.22■■□□□ 1.15
CTSA-212ENST00000606394 ARHGAP5Q13017 1502 aa22.21■■□□□ 1.15
CTSA-212ENST00000606394 CLIP1P30622 1438 aa22.2■■□□□ 1.14
CTSA-212ENST00000606394 MLH3Q9UHC1 1453 aa22.2■■□□□ 1.14
CTSA-212ENST00000606394 DIP2CQ9Y2E4 1556 aa22.2■■□□□ 1.14
CTSA-212ENST00000606394 ATP1B4Q9UN42 357 aaPredicted RBP22.19■■□□□ 1.14
CTSA-212ENST00000606394 ILDR2Q71H61 639 aa22.18■■□□□ 1.14
CTSA-212ENST00000606394 AGLP35573 1532 aa22.17■■□□□ 1.14
CTSA-212ENST00000606394 MYT1LQ9UL68 1186 aa22.16■■□□□ 1.14
CTSA-212ENST00000606394 IQSEC2Q5JU85 1478 aa22.15■■□□□ 1.14
CTSA-212ENST00000606394 TRAPPC8Q9Y2L5 1435 aa22.15■■□□□ 1.14
CTSA-212ENST00000606394 C3P01024 1663 aa22.15■■□□□ 1.14
CTSA-212ENST00000606394 ESF1Q9H501 851 aaKnown RBP22.15■■□□□ 1.14
CTSA-212ENST00000606394 ARHGAP35Q9NRY4 1499 aa22.15■■□□□ 1.14
CTSA-212ENST00000606394 CNTLNQ9NXG0 1405 aa22.13■■□□□ 1.13
CTSA-212ENST00000606394 ABCA6Q8N139 1617 aa22.13■■□□□ 1.13
CTSA-212ENST00000606394 UBTFP17480 764 aaKnown RBP22.12■■□□□ 1.13
CTSA-212ENST00000606394 SPATA31D1Q6ZQQ2 1576 aa22.1■■□□□ 1.13
CTSA-212ENST00000606394 CDC42BPBQ9Y5S2 1711 aa22.1■■□□□ 1.13
CTSA-212ENST00000606394 LTBP4Q8N2S1 1624 aa22.09■■□□□ 1.13
CTSA-212ENST00000606394 NCOA1Q15788 1441 aa22.08■■□□□ 1.13
CTSA-212ENST00000606394 ABCC1P33527 1531 aa22.08■■□□□ 1.13
CTSA-212ENST00000606394 PREX2Q70Z35 1606 aa22.07■■□□□ 1.12
CTSA-212ENST00000606394 NPATQ14207 1427 aa22.05■■□□□ 1.12
CTSA-212ENST00000606394 ITSN2Q9NZM3 1697 aa22.04■■□□□ 1.12
CTSA-212ENST00000606394 LRRIQ1Q96JM4 1722 aa22.03■■□□□ 1.12
CTSA-212ENST00000606394 CCDC18Q5T9S5 1454 aa22.03■■□□□ 1.12
CTSA-212ENST00000606394 KIDINS220Q9ULH0 1771 aa22.02■■□□□ 1.12
CTSA-212ENST00000606394 MROH2AA6NES4 1674 aa22.01■■□□□ 1.11
CTSA-212ENST00000606394 CASKIN1Q8WXD9 1431 aa21.98■■□□□ 1.11
CTSA-212ENST00000606394 CAMSAP1Q5T5Y3 1602 aa21.98■■□□□ 1.11
CTSA-212ENST00000606394 ZMYM3Q14202 1370 aa21.96■■□□□ 1.11
CTSA-212ENST00000606394 SAMD9LQ8IVG5 1584 aa21.95■■□□□ 1.1
CTSA-212ENST00000606394 CDC42BPAQ5VT25 1732 aa21.94■■□□□ 1.1
CTSA-212ENST00000606394 EHMT2Q96KQ7 1210 aa21.94■■□□□ 1.1
CTSA-212ENST00000606394 PLA2R1Q13018 1463 aa21.93■■□□□ 1.1
CTSA-212ENST00000606394 PKD2Q13563 968 aa21.93■■□□□ 1.1
CTSA-212ENST00000606394 SPAG9O60271 1321 aaKnown RBP21.91■■□□□ 1.1
CTSA-212ENST00000606394 ZNF142P52746 1687 aaPredicted RBP21.89■■□□□ 1.1
CTSA-212ENST00000606394 KIAA1107Q9UPP5 1409 aa21.88■■□□□ 1.09
CTSA-212ENST00000606394 ZNF335Q9H4Z2 1342 aaPredicted RBP21.87■■□□□ 1.09
CTSA-212ENST00000606394 NCKAP5LQ9HCH0 1330 aa21.87■■□□□ 1.09
CTSA-212ENST00000606394 SYCP2Q9BX26 1530 aa21.87■■□□□ 1.09
CTSA-212ENST00000606394 UBAP1LF5GYI3 381 aa21.87■■□□□ 1.09
CTSA-212ENST00000606394 TCOF1Q13428 1488 aaKnown RBP21.87■■□□□ 1.09
CTSA-212ENST00000606394 PLXNC1O60486 1568 aa21.87■■□□□ 1.09
CTSA-212ENST00000606394 GPATCH8Q9UKJ3 1502 aaKnown RBP21.86■■□□□ 1.09
CTSA-212ENST00000606394 PLEKHH2Q8IVE3 1493 aa21.86■■□□□ 1.09
CTSA-212ENST00000606394 FYCO1Q9BQS8 1478 aa21.86■■□□□ 1.09
CTSA-212ENST00000606394 PPP6R1Q9UPN7 881 aa21.86■■□□□ 1.09
CTSA-212ENST00000606394 MYO3AQ8NEV4 1616 aa21.86■■□□□ 1.09
CTSA-212ENST00000606394 ATP7AQ04656 1500 aa21.85■■□□□ 1.09
CTSA-212ENST00000606394 ZNF777Q9ULD5 760 aaPredicted RBP21.85■■□□□ 1.09
CTSA-212ENST00000606394 PTPRKQ15262 1439 aa21.85■■□□□ 1.09
CTSA-212ENST00000606394 CEP170BQ9Y4F5 1589 aaPredicted RBP21.85■■□□□ 1.09
CTSA-212ENST00000606394 SUPT6HQ7KZ85 1726 aaKnown RBP21.85■■□□□ 1.09
CTSA-212ENST00000606394 A2MP01023 1474 aa21.84■■□□□ 1.09
CTSA-212ENST00000606394 CLTCQ00610 1675 aaKnown RBP21.84■■□□□ 1.09
CTSA-212ENST00000606394 INO80Q9ULG1 1556 aaPredicted RBP21.82■■□□□ 1.08
CTSA-212ENST00000606394 HNRNPMP52272 730 aaKnown RBP eCLIP21.82■■□□□ 1.08
CTSA-212ENST00000606394 CFDP1Q9UEE9 299 aaPredicted RBP21.79■■□□□ 1.08
CTSA-212ENST00000606394 GGT6Q6P531 493 aa21.77■■□□□ 1.08
CTSA-212ENST00000606394 A2ML1A8K2U0 1454 aa21.76■■□□□ 1.07
CTSA-212ENST00000606394 CCNB3Q8WWL7 1395 aa21.75■■□□□ 1.07
CTSA-212ENST00000606394 ADGBQ8N7X0 1667 aa21.75■■□□□ 1.07
CTSA-212ENST00000606394 CHIC1Q5VXU3 224 aa21.72■■□□□ 1.07
CTSA-212ENST00000606394 CPS1P31327 1500 aa21.71■■□□□ 1.07
CTSA-212ENST00000606394 DNMT1P26358 1616 aaKnown RBP21.71■■□□□ 1.07
CTSA-212ENST00000606394 RTEL1-TNFRSF6BF6WH68 1400 aa21.7■■□□□ 1.06
CTSA-212ENST00000606394 TOM1O60784 492 aa21.69■■□□□ 1.06
CTSA-212ENST00000606394 FAM135AQ9P2D6 1515 aa21.68■■□□□ 1.06
CTSA-212ENST00000606394 MTUS2Q5JR59 1369 aa21.66■■□□□ 1.06
CTSA-212ENST00000606394 DHX29Q7Z478 1369 aaKnown RBP21.66■■□□□ 1.06
CTSA-212ENST00000606394 HSPA1LP34931 641 aa21.66■■□□□ 1.06
CTSA-212ENST00000606394 POLR1AO95602 1720 aaPredicted RBP21.66■■□□□ 1.06
CTSA-212ENST00000606394 MBD5Q9P267 1494 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms