RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 UHRF1BP1Q6BDS2 1440 aa25.14■■□□□ 1.62
TRIM11-205ENST00000602308 MAGI2Q86UL8 1455 aa25.13■■□□□ 1.61
TRIM11-205ENST00000602308 HECW1Q76N89 1606 aa25.09■■□□□ 1.61
TRIM11-205ENST00000602308 RAPGEF6Q8TEU7 1601 aa25.05■■□□□ 1.6
TRIM11-205ENST00000602308 CFAP74Q9C0B2 1584 aa25.04■■□□□ 1.6
TRIM11-205ENST00000602308 SETD1BQ9UPS6 1966 aaKnown RBP25.04■■□□□ 1.6
TRIM11-205ENST00000602308 ATP10AO60312 1499 aa25.03■■□□□ 1.6
TRIM11-205ENST00000602308 NUP153P49790 1475 aaKnown RBP25.02■■□□□ 1.6
TRIM11-205ENST00000602308 UBAP1LF5GYI3 381 aa25.02■■□□□ 1.6
TRIM11-205ENST00000602308 C9orf84Q5VXU9 1444 aa25.01■■□□□ 1.59
TRIM11-205ENST00000602308 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.01■■□□□ 1.594e-6■■□□□ 13.2
TRIM11-205ENST00000602308 PLEKHD1A6NEE1 506 aa25■■□□□ 1.59
TRIM11-205ENST00000602308 SCAPERQ9BY12 1400 aa24.98■■□□□ 1.59
TRIM11-205ENST00000602308 PRXQ9BXM0 1461 aa24.97■■□□□ 1.59
TRIM11-205ENST00000602308 NCOA1Q15788 1441 aa24.95■■□□□ 1.58
TRIM11-205ENST00000602308 MED1Q15648 1581 aaPredicted RBP24.92■■□□□ 1.58
TRIM11-205ENST00000602308 SAMD9Q5K651 1589 aa24.91■■□□□ 1.58
TRIM11-205ENST00000602308 ZNF335Q9H4Z2 1342 aaPredicted RBP24.9■■□□□ 1.58
TRIM11-205ENST00000602308 TRAPPC8Q9Y2L5 1435 aa24.86■■□□□ 1.57
TRIM11-205ENST00000602308 HSPA1LP34931 641 aa24.86■■□□□ 1.57
TRIM11-205ENST00000602308 C3P01024 1663 aa24.85■■□□□ 1.57
TRIM11-205ENST00000602308 PLCH2O75038 1416 aa24.85■■□□□ 1.57
TRIM11-205ENST00000602308 NCKAP5LQ9HCH0 1330 aa24.81■■□□□ 1.56
TRIM11-205ENST00000602308 CAMSAP1Q5T5Y3 1602 aa24.79■■□□□ 1.56
TRIM11-205ENST00000602308 AFAP1Q8N556 730 aa24.76■■□□□ 1.55
TRIM11-205ENST00000602308 EFCAB2Q5VUJ9 269 aa24.75■■□□□ 1.55
TRIM11-205ENST00000602308 ESF1Q9H501 851 aaKnown RBP24.74■■□□□ 1.55
TRIM11-205ENST00000602308 SCAF1Q9H7N4 1312 aaKnown RBP24.73■■□□□ 1.55
TRIM11-205ENST00000602308 PHF23Q9BUL5 403 aaPredicted RBP24.73■■□□□ 1.55
TRIM11-205ENST00000602308 ZNF518AQ6AHZ1 1483 aa24.72■■□□□ 1.55
TRIM11-205ENST00000602308 PIP4K2BP78356 416 aa24.72■■□□□ 1.55
TRIM11-205ENST00000602308 DIP2CQ9Y2E4 1556 aa24.71■■□□□ 1.55
TRIM11-205ENST00000602308 RANGAP1P46060 587 aaPredicted RBP24.7■■□□□ 1.54
TRIM11-205ENST00000602308 MYT1LQ9UL68 1186 aa24.7■■□□□ 1.54
TRIM11-205ENST00000602308 KDM5CP41229 1560 aa24.7■■□□□ 1.54
TRIM11-205ENST00000602308 REREQ9P2R6 1566 aa24.7■■□□□ 1.54
TRIM11-205ENST00000602308 AGLP35573 1532 aa24.66■■□□□ 1.54
TRIM11-205ENST00000602308 CDK13Q14004 1512 aaKnown RBP24.66■■□□□ 1.54
TRIM11-205ENST00000602308 PKD2Q13563 968 aa24.65■■□□□ 1.54
TRIM11-205ENST00000602308 NPATQ14207 1427 aa24.63■■□□□ 1.53
TRIM11-205ENST00000602308 CNTLNQ9NXG0 1405 aa24.63■■□□□ 1.53
TRIM11-205ENST00000602308 ABCA6Q8N139 1617 aa24.63■■□□□ 1.53
TRIM11-205ENST00000602308 TOM1O60784 492 aa24.62■■□□□ 1.53
TRIM11-205ENST00000602308 TCOF1Q13428 1488 aaKnown RBP24.61■■□□□ 1.53
TRIM11-205ENST00000602308 PLA2R1Q13018 1463 aa24.6■■□□□ 1.53
TRIM11-205ENST00000602308 MLH3Q9UHC1 1453 aa24.59■■□□□ 1.53
TRIM11-205ENST00000602308 MYO5CQ9NQX4 1742 aa24.59■■□□□ 1.53
TRIM11-205ENST00000602308 PPP6R1Q9UPN7 881 aa24.59■■□□□ 1.53
TRIM11-205ENST00000602308 ZMYM3Q14202 1370 aa24.57■■□□□ 1.52
TRIM11-205ENST00000602308 ARHGAP5Q13017 1502 aa24.53■■□□□ 1.52
TRIM11-205ENST00000602308 RGS17Q9UGC6 210 aaPredicted RBP24.52■■□□□ 1.52
TRIM11-205ENST00000602308 CSRNP3Q8WYN3 585 aa24.49■■□□□ 1.51
TRIM11-205ENST00000602308 KIF14Q15058 1648 aa24.49■■□□□ 1.51
TRIM11-205ENST00000602308 MROH2AA6NES4 1674 aa24.49■■□□□ 1.51
TRIM11-205ENST00000602308 ZNF142P52746 1687 aaPredicted RBP24.49■■□□□ 1.51
TRIM11-205ENST00000602308 MYO3AQ8NEV4 1616 aa24.48■■□□□ 1.51
TRIM11-205ENST00000602308 CEP170BQ9Y4F5 1589 aaPredicted RBP24.48■■□□□ 1.51
TRIM11-205ENST00000602308 ALKQ9UM73 1620 aa24.46■■□□□ 1.51
TRIM11-205ENST00000602308 CPS1P31327 1500 aa24.46■■□□□ 1.51
TRIM11-205ENST00000602308 SENP3Q9H4L4 574 aaPredicted RBP24.44■■□□□ 1.5
TRIM11-205ENST00000602308 SHANK2Q9UPX8 1470 aa24.44■■□□□ 1.5
TRIM11-205ENST00000602308 PTPRKQ15262 1439 aa24.44■■□□□ 1.5
TRIM11-205ENST00000602308 SUPT6HQ7KZ85 1726 aaKnown RBP24.43■■□□□ 1.5
TRIM11-205ENST00000602308 KIDINS220Q9ULH0 1771 aa24.42■■□□□ 1.5
TRIM11-205ENST00000602308 ATP1B4Q9UN42 357 aaPredicted RBP24.41■■□□□ 1.5
TRIM11-205ENST00000602308 CDK11AQ9UQ88 783 aaPredicted RBP24.4■■□□□ 1.5
TRIM11-205ENST00000602308 TROQ12816 1431 aaPredicted RBP24.37■■□□□ 1.49
TRIM11-205ENST00000602308 ABCC1P33527 1531 aa24.37■■□□□ 1.49
TRIM11-205ENST00000602308 CDC42BPBQ9Y5S2 1711 aa24.36■■□□□ 1.49
TRIM11-205ENST00000602308 CLTCQ00610 1675 aaKnown RBP24.35■■□□□ 1.49
TRIM11-205ENST00000602308 NEURL4Q96JN8 1562 aa24.33■■□□□ 1.49
TRIM11-205ENST00000602308 ITSN2Q9NZM3 1697 aa24.33■■□□□ 1.49
TRIM11-205ENST00000602308 A2ML1A8K2U0 1454 aa24.32■■□□□ 1.48
TRIM11-205ENST00000602308 DNMT1P26358 1616 aaKnown RBP24.32■■□□□ 1.48
TRIM11-205ENST00000602308 POTEAQ6S8J7 498 aa24.31■■□□□ 1.48
TRIM11-205ENST00000602308 VWDEQ8N2E2 1590 aa24.3■■□□□ 1.48
TRIM11-205ENST00000602308 CLIP1P30622 1438 aa24.28■■□□□ 1.48
TRIM11-205ENST00000602308 SAMD9LQ8IVG5 1584 aa24.26■■□□□ 1.47
TRIM11-205ENST00000602308 GGT6Q6P531 493 aa24.26■■□□□ 1.47
TRIM11-205ENST00000602308 POLR1AO95602 1720 aaPredicted RBP24.25■■□□□ 1.47
TRIM11-205ENST00000602308 PREX2Q70Z35 1606 aa24.24■■□□□ 1.47
TRIM11-205ENST00000602308 FMN1Q68DA7 1419 aa24.22■■□□□ 1.47
TRIM11-205ENST00000602308 SPAG9O60271 1321 aaKnown RBP24.21■■□□□ 1.47
TRIM11-205ENST00000602308 ANKLE2Q86XL3 938 aa24.2■■□□□ 1.46
TRIM11-205ENST00000602308 PLXNC1O60486 1568 aa24.2■■□□□ 1.46
TRIM11-205ENST00000602308 LRRC7Q96NW7 1537 aa24.18■■□□□ 1.46
TRIM11-205ENST00000602308 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.17■■□□□ 1.46
TRIM11-205ENST00000602308 A2MP01023 1474 aa24.17■■□□□ 1.46
TRIM11-205ENST00000602308 FBXO31Q5XUX0 539 aaPredicted RBP24.16■■□□□ 1.46
TRIM11-205ENST00000602308 HNRNPMP52272 730 aaKnown RBP eCLIP24.15■■□□□ 1.46
TRIM11-205ENST00000602308 ZNF777Q9ULD5 760 aaPredicted RBP24.15■■□□□ 1.46
TRIM11-205ENST00000602308 NPHP4O75161 1426 aaPredicted RBP24.15■■□□□ 1.46
TRIM11-205ENST00000602308 TNRQ92752 1358 aa24.14■■□□□ 1.45
TRIM11-205ENST00000602308 MED14O60244 1454 aa24.13■■□□□ 1.45
TRIM11-205ENST00000602308 ATP7AQ04656 1500 aa24.13■■□□□ 1.45
TRIM11-205ENST00000602308 STRCP1A6NGW2 1772 aa24.13■■□□□ 1.45
TRIM11-205ENST00000602308 RNF17Q9BXT8 1623 aaKnown RBP24.13■■□□□ 1.45
TRIM11-205ENST00000602308 LRRIQ1Q96JM4 1722 aa24.13■■□□□ 1.45
TRIM11-205ENST00000602308 SYCP2Q9BX26 1530 aa24.11■■□□□ 1.45
TRIM11-205ENST00000602308 SETD1AO15047 1707 aaKnown RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms