RNA–Protein interactions for RNA: ENST00000601853.5

FARP1-237, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-237ENST00000601853 PLCH2O75038 1416 aa25.63■■□□□ 1.69
FARP1-237ENST00000601853 ATP10AO60312 1499 aa25.62■■□□□ 1.69
FARP1-237ENST00000601853 DMRT2Q9Y5R5 561 aa25.61■■□□□ 1.69
FARP1-237ENST00000601853 ARHGEF12Q9NZN5 1544 aa25.61■■□□□ 1.69
FARP1-237ENST00000601853 CEBPAP49715 358 aaPredicted RBP25.58■■□□□ 1.69
FARP1-237ENST00000601853 EEA1Q15075 1411 aa25.57■■□□□ 1.68
FARP1-237ENST00000601853 C9orf84Q5VXU9 1444 aa25.56■■□□□ 1.68
FARP1-237ENST00000601853 EFCAB2Q5VUJ9 269 aa25.56■■□□□ 1.68
FARP1-237ENST00000601853 ILDR2Q71H61 639 aa25.56■■□□□ 1.68
FARP1-237ENST00000601853 PREX1Q8TCU6 1659 aa25.55■■□□□ 1.68
FARP1-237ENST00000601853 DISP3Q9P2K9 1392 aa25.55■■□□□ 1.68
FARP1-237ENST00000601853 CDK13Q14004 1512 aaKnown RBP25.54■■□□□ 1.68
FARP1-237ENST00000601853 SOCS7O14512 581 aa25.53■■□□□ 1.68
FARP1-237ENST00000601853 STRCQ7RTU9 1775 aa25.5■■□□□ 1.67
FARP1-237ENST00000601853 SETD1BQ9UPS6 1966 aaKnown RBP25.49■■□□□ 1.67
FARP1-237ENST00000601853 UHRF1BP1Q6BDS2 1440 aa25.46■■□□□ 1.67
FARP1-237ENST00000601853 AFAP1Q8N556 730 aa25.45■■□□□ 1.66
FARP1-237ENST00000601853 CDK11AQ9UQ88 783 aaPredicted RBP25.45■■□□□ 1.66
FARP1-237ENST00000601853 ZNF518AQ6AHZ1 1483 aa25.45■■□□□ 1.66
FARP1-237ENST00000601853 MYO5CQ9NQX4 1742 aa25.43■■□□□ 1.66
FARP1-237ENST00000601853 PTPRTO14522 1441 aa25.42■■□□□ 1.66
FARP1-237ENST00000601853 ATP1B4Q9UN42 357 aaPredicted RBP25.41■■□□□ 1.66
FARP1-237ENST00000601853 KDM5CP41229 1560 aa25.39■■□□□ 1.66
FARP1-237ENST00000601853 FMN1Q68DA7 1419 aa25.38■■□□□ 1.65
FARP1-237ENST00000601853 MYT1LQ9UL68 1186 aa25.36■■□□□ 1.65
FARP1-237ENST00000601853 REREQ9P2R6 1566 aa25.35■■□□□ 1.65
FARP1-237ENST00000601853 TROQ12816 1431 aaPredicted RBP25.34■■□□□ 1.65
FARP1-237ENST00000601853 DIP2CQ9Y2E4 1556 aa25.34■■□□□ 1.65
FARP1-237ENST00000601853 KIF14Q15058 1648 aa25.34■■□□□ 1.65
FARP1-237ENST00000601853 ARHGAP5Q13017 1502 aa25.33■■□□□ 1.65
FARP1-237ENST00000601853 MLH3Q9UHC1 1453 aa25.33■■□□□ 1.65
FARP1-237ENST00000601853 TRAPPC8Q9Y2L5 1435 aa25.32■■□□□ 1.64
FARP1-237ENST00000601853 ESF1Q9H501 851 aaKnown RBP25.31■■□□□ 1.64
FARP1-237ENST00000601853 LTBP4Q8N2S1 1624 aa25.3■■□□□ 1.64
FARP1-237ENST00000601853 C3P01024 1663 aa25.3■■□□□ 1.64
FARP1-237ENST00000601853 AGLP35573 1532 aa25.3■■□□□ 1.64
FARP1-237ENST00000601853 IQSEC2Q5JU85 1478 aa25.28■■□□□ 1.64
FARP1-237ENST00000601853 CLIP1P30622 1438 aa25.28■■□□□ 1.64
FARP1-237ENST00000601853 SPATA31D1Q6ZQQ2 1576 aa25.27■■□□□ 1.64
FARP1-237ENST00000601853 UBTFP17480 764 aaKnown RBP25.27■■□□□ 1.64
FARP1-237ENST00000601853 ARHGAP35Q9NRY4 1499 aa25.27■■□□□ 1.64
FARP1-237ENST00000601853 ABCA6Q8N139 1617 aa25.26■■□□□ 1.63
FARP1-237ENST00000601853 NCOA1Q15788 1441 aa25.25■■□□□ 1.63
FARP1-237ENST00000601853 CDC42BPBQ9Y5S2 1711 aa25.23■■□□□ 1.63
FARP1-237ENST00000601853 CNTLNQ9NXG0 1405 aa25.22■■□□□ 1.63
FARP1-237ENST00000601853 EHMT2Q96KQ7 1210 aa25.18■■□□□ 1.62
FARP1-237ENST00000601853 ABCC1P33527 1531 aa25.17■■□□□ 1.62
FARP1-237ENST00000601853 NPATQ14207 1427 aa25.17■■□□□ 1.62
FARP1-237ENST00000601853 KIDINS220Q9ULH0 1771 aa25.15■■□□□ 1.62
FARP1-237ENST00000601853 LRRIQ1Q96JM4 1722 aa25.15■■□□□ 1.62
FARP1-237ENST00000601853 PREX2Q70Z35 1606 aa25.14■■□□□ 1.61
FARP1-237ENST00000601853 CAMSAP1Q5T5Y3 1602 aa25.13■■□□□ 1.61
FARP1-237ENST00000601853 ZMYM3Q14202 1370 aa25.13■■□□□ 1.61
FARP1-237ENST00000601853 ITSN2Q9NZM3 1697 aa25.12■■□□□ 1.61
FARP1-237ENST00000601853 NCKAP5LQ9HCH0 1330 aa25.12■■□□□ 1.61
FARP1-237ENST00000601853 MROH2AA6NES4 1674 aa25.09■■□□□ 1.61
FARP1-237ENST00000601853 ZNF335Q9H4Z2 1342 aaPredicted RBP25.09■■□□□ 1.61
FARP1-237ENST00000601853 UBAP1LF5GYI3 381 aa25.08■■□□□ 1.61
FARP1-237ENST00000601853 PKD2Q13563 968 aa25.07■■□□□ 1.6
FARP1-237ENST00000601853 CASKIN1Q8WXD9 1431 aa25.05■■□□□ 1.6
FARP1-237ENST00000601853 CCDC18Q5T9S5 1454 aa25.05■■□□□ 1.6
FARP1-237ENST00000601853 SAMD9LQ8IVG5 1584 aa25.05■■□□□ 1.6
FARP1-237ENST00000601853 SPAG9O60271 1321 aaKnown RBP25.04■■□□□ 1.6
FARP1-237ENST00000601853 CDC42BPAQ5VT25 1732 aa25.03■■□□□ 1.6
FARP1-237ENST00000601853 ZNF777Q9ULD5 760 aaPredicted RBP25.02■■□□□ 1.6
FARP1-237ENST00000601853 PLA2R1Q13018 1463 aa25.02■■□□□ 1.6
FARP1-237ENST00000601853 HNRNPMP52272 730 aaKnown RBP eCLIP25■■□□□ 1.59
FARP1-237ENST00000601853 TCOF1Q13428 1488 aaKnown RBP24.98■■□□□ 1.59
FARP1-237ENST00000601853 PTPRKQ15262 1439 aa24.98■■□□□ 1.59
FARP1-237ENST00000601853 SUPT6HQ7KZ85 1726 aaKnown RBP24.96■■□□□ 1.59
FARP1-237ENST00000601853 PPP6R1Q9UPN7 881 aa24.96■■□□□ 1.59
FARP1-237ENST00000601853 ZNF142P52746 1687 aaPredicted RBP24.96■■□□□ 1.59
FARP1-237ENST00000601853 GPATCH8Q9UKJ3 1502 aaKnown RBP24.96■■□□□ 1.59
FARP1-237ENST00000601853 SYCP2Q9BX26 1530 aa24.95■■□□□ 1.58
FARP1-237ENST00000601853 KIAA1107Q9UPP5 1409 aa24.95■■□□□ 1.58
FARP1-237ENST00000601853 CLTCQ00610 1675 aaKnown RBP24.94■■□□□ 1.58
FARP1-237ENST00000601853 CEP170BQ9Y4F5 1589 aaPredicted RBP24.93■■□□□ 1.58
FARP1-237ENST00000601853 GGT6Q6P531 493 aa24.93■■□□□ 1.58
FARP1-237ENST00000601853 A2MP01023 1474 aa24.93■■□□□ 1.58
FARP1-237ENST00000601853 MYO3AQ8NEV4 1616 aa24.93■■□□□ 1.58
FARP1-237ENST00000601853 PLXNC1O60486 1568 aa24.93■■□□□ 1.58
FARP1-237ENST00000601853 ATP7AQ04656 1500 aa24.92■■□□□ 1.58
FARP1-237ENST00000601853 CFDP1Q9UEE9 299 aaPredicted RBP24.89■■□□□ 1.58
FARP1-237ENST00000601853 PLEKHH2Q8IVE3 1493 aa24.89■■□□□ 1.57
FARP1-237ENST00000601853 FYCO1Q9BQS8 1478 aa24.88■■□□□ 1.57
FARP1-237ENST00000601853 INO80Q9ULG1 1556 aaPredicted RBP24.88■■□□□ 1.57
FARP1-237ENST00000601853 HSPA1LP34931 641 aa24.86■■□□□ 1.57
FARP1-237ENST00000601853 A2ML1A8K2U0 1454 aa24.85■■□□□ 1.57
FARP1-237ENST00000601853 TOM1O60784 492 aa24.83■■□□□ 1.57
FARP1-237ENST00000601853 CCNB3Q8WWL7 1395 aa24.81■■□□□ 1.56
FARP1-237ENST00000601853 CHIC1Q5VXU3 224 aa24.81■■□□□ 1.56
FARP1-237ENST00000601853 DNMT1P26358 1616 aaKnown RBP24.81■■□□□ 1.56
FARP1-237ENST00000601853 PIP4K2BP78356 416 aa24.8■■□□□ 1.56
FARP1-237ENST00000601853 SCAF1Q9H7N4 1312 aaKnown RBP24.8■■□□□ 1.56
FARP1-237ENST00000601853 CPS1P31327 1500 aa24.78■■□□□ 1.56
FARP1-237ENST00000601853 ADGBQ8N7X0 1667 aa24.78■■□□□ 1.56
FARP1-237ENST00000601853 MED1Q15648 1581 aaPredicted RBP24.77■■□□□ 1.56
FARP1-237ENST00000601853 SHANK2Q9UPX8 1470 aa24.77■■□□□ 1.56
FARP1-237ENST00000601853 FBXO31Q5XUX0 539 aaPredicted RBP24.75■■□□□ 1.55
FARP1-237ENST00000601853 ZNF644Q9H582 1327 aaPredicted RBP24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms