RNA–Protein interactions for RNA: ENST00000601772.1

DDX49-211, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 342 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-211ENST00000601772 SCAF1Q9H7N4 1312 aaKnown RBP14.03□□□□□ -0.16
DDX49-211ENST00000601772 RICTORQ6R327 1708 aa14.03□□□□□ -0.16
DDX49-211ENST00000601772 EFCAB5A4FU69 1503 aa14.01□□□□□ -0.17
DDX49-211ENST00000601772 HSPA1LP34931 641 aa13.99□□□□□ -0.17
DDX49-211ENST00000601772 ARHGEF12Q9NZN5 1544 aa13.98□□□□□ -0.17
DDX49-211ENST00000601772 FHOD3Q2V2M9 1422 aa13.98□□□□□ -0.17
DDX49-211ENST00000601772 ATP10BO94823 1461 aa13.97□□□□□ -0.17
DDX49-211ENST00000601772 ZMYM4Q5VZL5 1548 aa13.96□□□□□ -0.17
DDX49-211ENST00000601772 ZNF335Q9H4Z2 1342 aaPredicted RBP13.95□□□□□ -0.18
DDX49-211ENST00000601772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
DDX49-211ENST00000601772 PIP4K2BP78356 416 aa13.95□□□□□ -0.18
DDX49-211ENST00000601772 HNRNPUL2Q1KMD3 747 aaKnown RBP13.95□□□□□ -0.18
DDX49-211ENST00000601772 P3H3Q8IVL6 736 aa13.94□□□□□ -0.18
DDX49-211ENST00000601772 EHMT2Q96KQ7 1210 aa13.93□□□□□ -0.18
DDX49-211ENST00000601772 RAPGEF6Q8TEU7 1601 aa13.93□□□□□ -0.18
DDX49-211ENST00000601772 NCOA1Q15788 1441 aa13.92□□□□□ -0.18
DDX49-211ENST00000601772 RANGAP1P46060 587 aaPredicted RBP13.92□□□□□ -0.18
DDX49-211ENST00000601772 HECW1Q76N89 1606 aa13.92□□□□□ -0.18
DDX49-211ENST00000601772 CFAP74Q9C0B2 1584 aa13.92□□□□□ -0.18
DDX49-211ENST00000601772 SETD1BQ9UPS6 1966 aaKnown RBP13.91□□□□□ -0.18
DDX49-211ENST00000601772 MAGI2Q86UL8 1455 aa13.91□□□□□ -0.18
DDX49-211ENST00000601772 C9orf84Q5VXU9 1444 aa13.9□□□□□ -0.19
DDX49-211ENST00000601772 UBTFP17480 764 aaKnown RBP13.89□□□□□ -0.19
DDX49-211ENST00000601772 SENP3Q9H4L4 574 aaPredicted RBP13.87□□□□□ -0.19
DDX49-211ENST00000601772 ATP10AO60312 1499 aa13.87□□□□□ -0.19
DDX49-211ENST00000601772 CAMSAP1Q5T5Y3 1602 aa13.86□□□□□ -0.19
DDX49-211ENST00000601772 NCKAP5LQ9HCH0 1330 aa13.86□□□□□ -0.19
DDX49-211ENST00000601772 C3P01024 1663 aa13.85□□□□□ -0.19
DDX49-211ENST00000601772 ARHGAP35Q9NRY4 1499 aa13.83□□□□□ -0.2
DDX49-211ENST00000601772 TOM1O60784 492 aa13.82□□□□□ -0.2
DDX49-211ENST00000601772 ESF1Q9H501 851 aaKnown RBP13.82□□□□□ -0.2
DDX49-211ENST00000601772 SCAPERQ9BY12 1400 aa13.81□□□□□ -0.2
DDX49-211ENST00000601772 TRAPPC8Q9Y2L5 1435 aa13.81□□□□□ -0.2
DDX49-211ENST00000601772 NUP153P49790 1475 aaKnown RBP13.81□□□□□ -0.2
DDX49-211ENST00000601772 LRRIQ1Q96JM4 1722 aa13.79□□□□□ -0.2
DDX49-211ENST00000601772 MYT1LQ9UL68 1186 aa13.79□□□□□ -0.2
DDX49-211ENST00000601772 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.79□□□□□ -0.2
DDX49-211ENST00000601772 FMN1Q68DA7 1419 aa13.75□□□□□ -0.21
DDX49-211ENST00000601772 PLEKHD1A6NEE1 506 aa13.75□□□□□ -0.21
DDX49-211ENST00000601772 RGS17Q9UGC6 210 aaPredicted RBP13.75□□□□□ -0.21
DDX49-211ENST00000601772 PPP6R1Q9UPN7 881 aa13.74□□□□□ -0.21
DDX49-211ENST00000601772 CDK13Q14004 1512 aaKnown RBP13.74□□□□□ -0.21
DDX49-211ENST00000601772 SUPT6HQ7KZ85 1726 aaKnown RBP13.73□□□□□ -0.21
DDX49-211ENST00000601772 PKD2Q13563 968 aa13.72□□□□□ -0.21
DDX49-211ENST00000601772 SETD1AO15047 1707 aaKnown RBP13.7□□□□□ -0.22
DDX49-211ENST00000601772 DIP2CQ9Y2E4 1556 aa13.7□□□□□ -0.22
DDX49-211ENST00000601772 PLA2R1Q13018 1463 aa13.69□□□□□ -0.22
DDX49-211ENST00000601772 CLIP1P30622 1438 aa13.69□□□□□ -0.22
DDX49-211ENST00000601772 CPS1P31327 1500 aa13.69□□□□□ -0.22
DDX49-211ENST00000601772 PTPRKQ15262 1439 aa13.68□□□□□ -0.22
DDX49-211ENST00000601772 TCOF1Q13428 1488 aaKnown RBP13.67□□□□□ -0.22
DDX49-211ENST00000601772 ZNF518AQ6AHZ1 1483 aa13.67□□□□□ -0.22
DDX49-211ENST00000601772 CNTLNQ9NXG0 1405 aa13.67□□□□□ -0.22
DDX49-211ENST00000601772 POTEAQ6S8J7 498 aa13.67□□□□□ -0.22
DDX49-211ENST00000601772 ATP1B4Q9UN42 357 aaPredicted RBP13.67□□□□□ -0.22
DDX49-211ENST00000601772 MYO3AQ8NEV4 1616 aa13.67□□□□□ -0.22
DDX49-211ENST00000601772 NPATQ14207 1427 aa13.66□□□□□ -0.22
DDX49-211ENST00000601772 ABCA6Q8N139 1617 aa13.66□□□□□ -0.22
DDX49-211ENST00000601772 ZNF142P52746 1687 aaPredicted RBP13.66□□□□□ -0.22
DDX49-211ENST00000601772 PLCH2O75038 1416 aa13.65□□□□□ -0.22
DDX49-211ENST00000601772 AFAP1Q8N556 730 aa13.65□□□□□ -0.22
DDX49-211ENST00000601772 CASKIN1Q8WXD9 1431 aa13.64□□□□□ -0.23
DDX49-211ENST00000601772 AGLP35573 1532 aa13.64□□□□□ -0.23
DDX49-211ENST00000601772 ALKQ9UM73 1620 aa13.64□□□□□ -0.23
DDX49-211ENST00000601772 MYO5CQ9NQX4 1742 aa13.64□□□□□ -0.23
DDX49-211ENST00000601772 REREQ9P2R6 1566 aa13.64□□□□□ -0.23
DDX49-211ENST00000601772 CEP170BQ9Y4F5 1589 aaPredicted RBP13.64□□□□□ -0.23
DDX49-211ENST00000601772 KIF14Q15058 1648 aa13.64□□□□□ -0.23
DDX49-211ENST00000601772 KDM5CP41229 1560 aa13.63□□□□□ -0.23
DDX49-211ENST00000601772 FYCO1Q9BQS8 1478 aa13.63□□□□□ -0.23
DDX49-211ENST00000601772 SHANK2Q9UPX8 1470 aa13.63□□□□□ -0.23
DDX49-211ENST00000601772 EFCAB2Q5VUJ9 269 aa13.63□□□□□ -0.23
DDX49-211ENST00000601772 CCDC18Q5T9S5 1454 aa13.62□□□□□ -0.23
DDX49-211ENST00000601772 CEP162Q5TB80 1403 aa13.62□□□□□ -0.23
DDX49-211ENST00000601772 MROH2AA6NES4 1674 aa13.6□□□□□ -0.23
DDX49-211ENST00000601772 ZMYM3Q14202 1370 aa13.59□□□□□ -0.23
DDX49-211ENST00000601772 HRCP23327 699 aa13.59□□□□□ -0.23
DDX49-211ENST00000601772 TROQ12816 1431 aaPredicted RBP13.58□□□□□ -0.24
DDX49-211ENST00000601772 LOC105371045A0A1W2PR82 267 aa13.58□□□□□ -0.24
DDX49-211ENST00000601772 CDK11AQ9UQ88 783 aaPredicted RBP13.58□□□□□ -0.24
DDX49-211ENST00000601772 ARHGAP5Q13017 1502 aa13.58□□□□□ -0.24
DDX49-211ENST00000601772 CDC42BPBQ9Y5S2 1711 aa13.57□□□□□ -0.24
DDX49-211ENST00000601772 POLR1AO95602 1720 aaPredicted RBP13.56□□□□□ -0.24
DDX49-211ENST00000601772 SRCAPQ6ZRS2 3230 aa13.56□□□□□ -0.24
DDX49-211ENST00000601772 CDC42BPAQ5VT25 1732 aa13.56□□□□□ -0.24
DDX49-211ENST00000601772 PREX2Q70Z35 1606 aa13.55□□□□□ -0.24
DDX49-211ENST00000601772 CLTCQ00610 1675 aaKnown RBP13.55□□□□□ -0.24
DDX49-211ENST00000601772 NEURL4Q96JN8 1562 aa13.54□□□□□ -0.24
DDX49-211ENST00000601772 MLH3Q9UHC1 1453 aa13.54□□□□□ -0.24
DDX49-211ENST00000601772 VWDEQ8N2E2 1590 aa13.54□□□□□ -0.24
DDX49-211ENST00000601772 RNF17Q9BXT8 1623 aaKnown RBP13.53□□□□□ -0.24
DDX49-211ENST00000601772 UPF1Q92900 1129 aaKnown RBP eCLIP13.53□□□□□ -0.24
DDX49-211ENST00000601772 DNMT1P26358 1616 aaKnown RBP13.51□□□□□ -0.25
DDX49-211ENST00000601772 A2ML1A8K2U0 1454 aa13.51□□□□□ -0.25
DDX49-211ENST00000601772 KIDINS220Q9ULH0 1771 aa13.48□□□□□ -0.25
DDX49-211ENST00000601772 ITSN2Q9NZM3 1697 aa13.47□□□□□ -0.25
DDX49-211ENST00000601772 EHBP1L1Q8N3D4 1523 aa13.47□□□□□ -0.25
DDX49-211ENST00000601772 LRRC7Q96NW7 1537 aa13.47□□□□□ -0.25
DDX49-211ENST00000601772 TRIM52Q96A61 297 aa13.46□□□□□ -0.25
DDX49-211ENST00000601772 VPS8Q8N3P4 1428 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms