RNA–Protein interactions for RNA: ENST00000599004.1

C19orf48-211, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 5

Gene C19orf48, Length 866 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-211ENST00000599004 ILDR2Q71H61 639 aa20.14■□□□□ 0.81
C19orf48-211ENST00000599004 PREX1Q8TCU6 1659 aa20.13■□□□□ 0.81
C19orf48-211ENST00000599004 SOCS7O14512 581 aa20.12■□□□□ 0.81
C19orf48-211ENST00000599004 SCAPERQ9BY12 1400 aa20.11■□□□□ 0.81
C19orf48-211ENST00000599004 ARHGEF12Q9NZN5 1544 aa20.11■□□□□ 0.81
C19orf48-211ENST00000599004 DMRT2Q9Y5R5 561 aa20.09■□□□□ 0.81
C19orf48-211ENST00000599004 ATP10AO60312 1499 aa20.09■□□□□ 0.81
C19orf48-211ENST00000599004 C9orf84Q5VXU9 1444 aa20.08■□□□□ 0.8
C19orf48-211ENST00000599004 CEBPAP49715 358 aaPredicted RBP20.07■□□□□ 0.8
C19orf48-211ENST00000599004 PLCH2O75038 1416 aa20.07■□□□□ 0.8
C19orf48-211ENST00000599004 STRCQ7RTU9 1775 aa20.06■□□□□ 0.8
C19orf48-211ENST00000599004 CDK13Q14004 1512 aaKnown RBP20.04■□□□□ 0.8
C19orf48-211ENST00000599004 UHRF1BP1Q6BDS2 1440 aa20.03■□□□□ 0.8
C19orf48-211ENST00000599004 SETD1BQ9UPS6 1966 aaKnown RBP20.02■□□□□ 0.8
C19orf48-211ENST00000599004 EFCAB2Q5VUJ9 269 aa20.01■□□□□ 0.79
C19orf48-211ENST00000599004 SPATA31D1Q6ZQQ2 1576 aa20■□□□□ 0.79
C19orf48-211ENST00000599004 MYO5CQ9NQX4 1742 aa19.99■□□□□ 0.79
C19orf48-211ENST00000599004 EEA1Q15075 1411 aa19.98■□□□□ 0.79
C19orf48-211ENST00000599004 ZNF518AQ6AHZ1 1483 aa19.96■□□□□ 0.79
C19orf48-211ENST00000599004 PTPRTO14522 1441 aa19.95■□□□□ 0.78
C19orf48-211ENST00000599004 MYT1LQ9UL68 1186 aa19.95■□□□□ 0.78
C19orf48-211ENST00000599004 KDM5CP41229 1560 aa19.93■□□□□ 0.78
C19orf48-211ENST00000599004 AFAP1Q8N556 730 aa19.93■□□□□ 0.78
C19orf48-211ENST00000599004 ATP1B4Q9UN42 357 aaPredicted RBP19.93■□□□□ 0.78
C19orf48-211ENST00000599004 CDK11AQ9UQ88 783 aaPredicted RBP19.91■□□□□ 0.78
C19orf48-211ENST00000599004 ARHGAP5Q13017 1502 aa19.91■□□□□ 0.78
C19orf48-211ENST00000599004 C3P01024 1663 aa19.91■□□□□ 0.78
C19orf48-211ENST00000599004 DIP2CQ9Y2E4 1556 aa19.9■□□□□ 0.78
C19orf48-211ENST00000599004 KIF14Q15058 1648 aa19.9■□□□□ 0.78
C19orf48-211ENST00000599004 LTBP4Q8N2S1 1624 aa19.89■□□□□ 0.77
C19orf48-211ENST00000599004 ESF1Q9H501 851 aaKnown RBP19.89■□□□□ 0.77
C19orf48-211ENST00000599004 REREQ9P2R6 1566 aa19.89■□□□□ 0.77
C19orf48-211ENST00000599004 IQSEC2Q5JU85 1478 aa19.87■□□□□ 0.77
C19orf48-211ENST00000599004 FMN1Q68DA7 1419 aa19.86■□□□□ 0.77
C19orf48-211ENST00000599004 TRAPPC8Q9Y2L5 1435 aa19.86■□□□□ 0.77
C19orf48-211ENST00000599004 ABCA6Q8N139 1617 aa19.86■□□□□ 0.77
C19orf48-211ENST00000599004 TROQ12816 1431 aaPredicted RBP19.85■□□□□ 0.77
C19orf48-211ENST00000599004 MLH3Q9UHC1 1453 aa19.84■□□□□ 0.77
C19orf48-211ENST00000599004 NCOA1Q15788 1441 aa19.84■□□□□ 0.77
C19orf48-211ENST00000599004 AGLP35573 1532 aa19.83■□□□□ 0.77
C19orf48-211ENST00000599004 CLIP1P30622 1438 aa19.83■□□□□ 0.76
C19orf48-211ENST00000599004 CNTLNQ9NXG0 1405 aa19.8■□□□□ 0.76
C19orf48-211ENST00000599004 CDC42BPBQ9Y5S2 1711 aa19.79■□□□□ 0.76
C19orf48-211ENST00000599004 ARHGAP35Q9NRY4 1499 aa19.77■□□□□ 0.76
C19orf48-211ENST00000599004 CAMSAP1Q5T5Y3 1602 aa19.76■□□□□ 0.75
C19orf48-211ENST00000599004 UBTFP17480 764 aaKnown RBP19.76■□□□□ 0.75
C19orf48-211ENST00000599004 ABCC1P33527 1531 aa19.76■□□□□ 0.75
C19orf48-211ENST00000599004 EHMT2Q96KQ7 1210 aa19.75■□□□□ 0.75
C19orf48-211ENST00000599004 PREX2Q70Z35 1606 aa19.75■□□□□ 0.75
C19orf48-211ENST00000599004 ITSN2Q9NZM3 1697 aa19.75■□□□□ 0.75
C19orf48-211ENST00000599004 UBAP1LF5GYI3 381 aa19.74■□□□□ 0.75
C19orf48-211ENST00000599004 KIDINS220Q9ULH0 1771 aa19.74■□□□□ 0.75
C19orf48-211ENST00000599004 NPATQ14207 1427 aa19.74■□□□□ 0.75
C19orf48-211ENST00000599004 LRRIQ1Q96JM4 1722 aa19.73■□□□□ 0.75
C19orf48-211ENST00000599004 ZNF335Q9H4Z2 1342 aaPredicted RBP19.72■□□□□ 0.75
C19orf48-211ENST00000599004 NCKAP5LQ9HCH0 1330 aa19.72■□□□□ 0.75
C19orf48-211ENST00000599004 MROH2AA6NES4 1674 aa19.71■□□□□ 0.75
C19orf48-211ENST00000599004 ZMYM3Q14202 1370 aa19.7■□□□□ 0.74
C19orf48-211ENST00000599004 PKD2Q13563 968 aa19.66■□□□□ 0.74
C19orf48-211ENST00000599004 CDC42BPAQ5VT25 1732 aa19.65■□□□□ 0.74
C19orf48-211ENST00000599004 PLA2R1Q13018 1463 aa19.65■□□□□ 0.74
C19orf48-211ENST00000599004 SAMD9LQ8IVG5 1584 aa19.65■□□□□ 0.74
C19orf48-211ENST00000599004 SUPT6HQ7KZ85 1726 aaKnown RBP19.65■□□□□ 0.74
C19orf48-211ENST00000599004 MYO3AQ8NEV4 1616 aa19.64■□□□□ 0.73
C19orf48-211ENST00000599004 ZNF142P52746 1687 aaPredicted RBP19.64■□□□□ 0.73
C19orf48-211ENST00000599004 CLTCQ00610 1675 aaKnown RBP19.63■□□□□ 0.73
C19orf48-211ENST00000599004 CCDC18Q5T9S5 1454 aa19.63■□□□□ 0.73
C19orf48-211ENST00000599004 ZNF777Q9ULD5 760 aaPredicted RBP19.62■□□□□ 0.73
C19orf48-211ENST00000599004 CEP170BQ9Y4F5 1589 aaPredicted RBP19.61■□□□□ 0.73
C19orf48-211ENST00000599004 TCOF1Q13428 1488 aaKnown RBP19.61■□□□□ 0.73
C19orf48-211ENST00000599004 SPAG9O60271 1321 aaKnown RBP19.61■□□□□ 0.73
C19orf48-211ENST00000599004 PPP6R1Q9UPN7 881 aa19.59■□□□□ 0.73
C19orf48-211ENST00000599004 SYCP2Q9BX26 1530 aa19.59■□□□□ 0.73
C19orf48-211ENST00000599004 PTPRKQ15262 1439 aa19.59■□□□□ 0.73
C19orf48-211ENST00000599004 CASKIN1Q8WXD9 1431 aa19.59■□□□□ 0.73
C19orf48-211ENST00000599004 ATP7AQ04656 1500 aa19.56■□□□□ 0.72
C19orf48-211ENST00000599004 SCAF1Q9H7N4 1312 aaKnown RBP19.56■□□□□ 0.72
C19orf48-211ENST00000599004 HNRNPMP52272 730 aaKnown RBP eCLIP19.56■□□□□ 0.72
C19orf48-211ENST00000599004 PLXNC1O60486 1568 aa19.56■□□□□ 0.72
C19orf48-211ENST00000599004 A2MP01023 1474 aa19.55■□□□□ 0.72
C19orf48-211ENST00000599004 HSPA1LP34931 641 aa19.55■□□□□ 0.72
C19orf48-211ENST00000599004 MED1Q15648 1581 aaPredicted RBP19.55■□□□□ 0.72
C19orf48-211ENST00000599004 GGT6Q6P531 493 aa19.55■□□□□ 0.72
C19orf48-211ENST00000599004 GPATCH8Q9UKJ3 1502 aaKnown RBP19.53■□□□□ 0.72
C19orf48-211ENST00000599004 PIP4K2BP78356 416 aa19.53■□□□□ 0.72
C19orf48-211ENST00000599004 INO80Q9ULG1 1556 aaPredicted RBP19.53■□□□□ 0.72
C19orf48-211ENST00000599004 TOM1O60784 492 aa19.51■□□□□ 0.71
C19orf48-211ENST00000599004 KIAA1107Q9UPP5 1409 aa19.51■□□□□ 0.71
C19orf48-211ENST00000599004 A2ML1A8K2U0 1454 aa19.5■□□□□ 0.71
C19orf48-211ENST00000599004 PLEKHH2Q8IVE3 1493 aa19.5■□□□□ 0.71
C19orf48-211ENST00000599004 DNMT1P26358 1616 aaKnown RBP19.49■□□□□ 0.71
C19orf48-211ENST00000599004 CPS1P31327 1500 aa19.49■□□□□ 0.71
C19orf48-211ENST00000599004 CFDP1Q9UEE9 299 aaPredicted RBP19.48■□□□□ 0.71
C19orf48-211ENST00000599004 FYCO1Q9BQS8 1478 aa19.48■□□□□ 0.71
C19orf48-211ENST00000599004 POLR1AO95602 1720 aaPredicted RBP19.47■□□□□ 0.71
C19orf48-211ENST00000599004 ADGBQ8N7X0 1667 aa19.46■□□□□ 0.71
C19orf48-211ENST00000599004 SHANK2Q9UPX8 1470 aa19.45■□□□□ 0.7
C19orf48-211ENST00000599004 PHF23Q9BUL5 403 aaPredicted RBP19.44■□□□□ 0.7
C19orf48-211ENST00000599004 NEURL4Q96JN8 1562 aa19.44■□□□□ 0.7
C19orf48-211ENST00000599004 CCNB3Q8WWL7 1395 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms