RNA–Protein interactions for RNA: ENST00000597671.5

USF2-209, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-209ENST00000597671 ZFYVE16Q7Z3T8 1539 aa11.32□□□□□ -0.6
USF2-209ENST00000597671 ARHGEF12Q9NZN5 1544 aa11.32□□□□□ -0.6
USF2-209ENST00000597671 SCAF1Q9H7N4 1312 aaKnown RBP11.32□□□□□ -0.6
USF2-209ENST00000597671 ZNF335Q9H4Z2 1342 aaPredicted RBP11.31□□□□□ -0.6
USF2-209ENST00000597671 SETD1BQ9UPS6 1966 aaKnown RBP11.3□□□□□ -0.6
USF2-209ENST00000597671 DENND4BO75064 1496 aaPredicted RBP11.3□□□□□ -0.6
USF2-209ENST00000597671 ZMYM4Q5VZL5 1548 aa11.29□□□□□ -0.6
USF2-209ENST00000597671 PIP4K2BP78356 416 aa11.28□□□□□ -0.6
USF2-209ENST00000597671 EFCAB5A4FU69 1503 aa11.28□□□□□ -0.6
USF2-209ENST00000597671 NCOA1Q15788 1441 aa11.27□□□□□ -0.6
USF2-209ENST00000597671 FHOD3Q2V2M9 1422 aa11.26□□□□□ -0.61
USF2-209ENST00000597671 C3P01024 1663 aa11.26□□□□□ -0.61
USF2-209ENST00000597671 ATP10BO94823 1461 aa11.25□□□□□ -0.61
USF2-209ENST00000597671 HECW1Q76N89 1606 aa11.25□□□□□ -0.61
USF2-209ENST00000597671 SETD1AO15047 1707 aaKnown RBP11.24□□□□□ -0.61
USF2-209ENST00000597671 CAMSAP1Q5T5Y3 1602 aa11.23□□□□□ -0.61
USF2-209ENST00000597671 CTTNBP2Q8WZ74 1663 aa11.22□□□□□ -0.61
USF2-209ENST00000597671 RGS17Q9UGC6 210 aaPredicted RBP11.21□□□□□ -0.61
USF2-209ENST00000597671 CFAP74Q9C0B2 1584 aa11.2□□□□□ -0.62
USF2-209ENST00000597671 NCKAP5LQ9HCH0 1330 aa11.19□□□□□ -0.62
USF2-209ENST00000597671 C9orf84Q5VXU9 1444 aa11.18□□□□□ -0.62
USF2-209ENST00000597671 MAGI2Q86UL8 1455 aa11.18□□□□□ -0.62
USF2-209ENST00000597671 CACNB1Q02641 598 aaPredicted RBP11.17□□□□□ -0.62
USF2-209ENST00000597671 GOLGA3Q08378 1498 aa11.17□□□□□ -0.62
USF2-209ENST00000597671 RAPGEF2Q9Y4G8 1499 aa11.17□□□□□ -0.62
USF2-209ENST00000597671 ATP10AO60312 1499 aa11.16□□□□□ -0.62
USF2-209ENST00000597671 ALKQ9UM73 1620 aa11.16□□□□□ -0.62
USF2-209ENST00000597671 MAPK8IP2Q13387 824 aaPredicted RBP11.15□□□□□ -0.62
USF2-209ENST00000597671 SUPT6HQ7KZ85 1726 aaKnown RBP11.15□□□□□ -0.63
USF2-209ENST00000597671 TRAPPC8Q9Y2L5 1435 aa11.13□□□□□ -0.63
USF2-209ENST00000597671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.13□□□□□ -0.63
USF2-209ENST00000597671 HNRNPUL2Q1KMD3 747 aaKnown RBP11.13□□□□□ -0.63
USF2-209ENST00000597671 TOM1O60784 492 aa11.12□□□□□ -0.63
USF2-209ENST00000597671 POTEAQ6S8J7 498 aa11.12□□□□□ -0.63
USF2-209ENST00000597671 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.12□□□□□ -0.63
USF2-209ENST00000597671 RAPGEF6Q8TEU7 1601 aa11.11□□□□□ -0.63
USF2-209ENST00000597671 P3H3Q8IVL6 736 aa11.11□□□□□ -0.63
USF2-209ENST00000597671 SCAPERQ9BY12 1400 aa11.09□□□□□ -0.63
USF2-209ENST00000597671 ZNF142P52746 1687 aaPredicted RBP11.08□□□□□ -0.64
USF2-209ENST00000597671 DIP2CQ9Y2E4 1556 aa11.07□□□□□ -0.64
USF2-209ENST00000597671 TCOF1Q13428 1488 aaKnown RBP11.07□□□□□ -0.64
USF2-209ENST00000597671 MYO3AQ8NEV4 1616 aa11.07□□□□□ -0.64
USF2-209ENST00000597671 NUP153P49790 1475 aaKnown RBP11.06□□□□□ -0.64
USF2-209ENST00000597671 ABCA6Q8N139 1617 aa11.06□□□□□ -0.64
USF2-209ENST00000597671 CPS1P31327 1500 aa11.05□□□□□ -0.64
USF2-209ENST00000597671 PLA2R1Q13018 1463 aa11.05□□□□□ -0.64
USF2-209ENST00000597671 CEP170BQ9Y4F5 1589 aaPredicted RBP11.04□□□□□ -0.64
USF2-209ENST00000597671 PKD2Q13563 968 aa11.03□□□□□ -0.64
USF2-209ENST00000597671 ESF1Q9H501 851 aaKnown RBP11.03□□□□□ -0.64
USF2-209ENST00000597671 PTPRKQ15262 1439 aa11.01□□□□□ -0.65
USF2-209ENST00000597671 POLR1AO95602 1720 aaPredicted RBP11.01□□□□□ -0.65
USF2-209ENST00000597671 SHANK2Q9UPX8 1470 aa11.01□□□□□ -0.65
USF2-209ENST00000597671 KDM5CP41229 1560 aa11.01□□□□□ -0.65
USF2-209ENST00000597671 REREQ9P2R6 1566 aa11.01□□□□□ -0.65
USF2-209ENST00000597671 AGLP35573 1532 aa11□□□□□ -0.65
USF2-209ENST00000597671 NEURL4Q96JN8 1562 aa11□□□□□ -0.65
USF2-209ENST00000597671 MROH2AA6NES4 1674 aa11□□□□□ -0.65
USF2-209ENST00000597671 NPATQ14207 1427 aa11□□□□□ -0.65
USF2-209ENST00000597671 UPF1Q92900 1129 aaKnown RBP eCLIP10.99□□□□□ -0.65
USF2-209ENST00000597671 MYT1LQ9UL68 1186 aa10.99□□□□□ -0.65
USF2-209ENST00000597671 VWDEQ8N2E2 1590 aa10.99□□□□□ -0.65
USF2-209ENST00000597671 ZNF518AQ6AHZ1 1483 aa10.98□□□□□ -0.65
USF2-209ENST00000597671 SAMD9Q5K651 1589 aa10.98□□□□□ -0.65
USF2-209ENST00000597671 STRCP1A6NGW2 1772 aa10.98□□□□□ -0.65
USF2-209ENST00000597671 PLEKHD1A6NEE1 506 aa10.97□□□□□ -0.65
USF2-209ENST00000597671 AFAP1Q8N556 730 aa10.97□□□□□ -0.65
USF2-209ENST00000597671 PLCH2O75038 1416 aa10.97□□□□□ -0.65
USF2-209ENST00000597671 CNTLNQ9NXG0 1405 aa10.97□□□□□ -0.65
USF2-209ENST00000597671 RNF17Q9BXT8 1623 aaKnown RBP10.97□□□□□ -0.65
USF2-209ENST00000597671 CLTCQ00610 1675 aaKnown RBP10.97□□□□□ -0.65
USF2-209ENST00000597671 MYO5CQ9NQX4 1742 aa10.97□□□□□ -0.65
USF2-209ENST00000597671 FAM9AQ8IZU1 332 aaPredicted RBP10.95□□□□□ -0.66
USF2-209ENST00000597671 DNMT1P26358 1616 aaKnown RBP10.95□□□□□ -0.66
USF2-209ENST00000597671 ZMYM3Q14202 1370 aa10.94□□□□□ -0.66
USF2-209ENST00000597671 CDK13Q14004 1512 aaKnown RBP10.93□□□□□ -0.66
USF2-209ENST00000597671 KIDINS220Q9ULH0 1771 aa10.9□□□□□ -0.66
USF2-209ENST00000597671 LRRC7Q96NW7 1537 aa10.9□□□□□ -0.66
USF2-209ENST00000597671 TRIM52Q96A61 297 aa10.9□□□□□ -0.66
USF2-209ENST00000597671 ARHGAP5Q13017 1502 aa10.89□□□□□ -0.67
USF2-209ENST00000597671 A2ML1A8K2U0 1454 aa10.89□□□□□ -0.67
USF2-209ENST00000597671 KIF14Q15058 1648 aa10.89□□□□□ -0.67
USF2-209ENST00000597671 EFCAB2Q5VUJ9 269 aa10.89□□□□□ -0.67
USF2-209ENST00000597671 SYNMO15061 1565 aa10.89□□□□□ -0.67
USF2-209ENST00000597671 MLH3Q9UHC1 1453 aa10.88□□□□□ -0.67
USF2-209ENST00000597671 XIRP1Q702N8 1843 aaKnown RBP10.87□□□□□ -0.67
USF2-209ENST00000597671 ITSN2Q9NZM3 1697 aa10.87□□□□□ -0.67
USF2-209ENST00000597671 RANGAP1P46060 587 aaPredicted RBP10.86□□□□□ -0.67
USF2-209ENST00000597671 PRXQ9BXM0 1461 aa10.86□□□□□ -0.67
USF2-209ENST00000597671 IQGAP1P46940 1657 aa10.85□□□□□ -0.67
USF2-209ENST00000597671 CDC42BPBQ9Y5S2 1711 aa10.84□□□□□ -0.67
USF2-209ENST00000597671 ROBO1Q9Y6N7 1651 aa10.83□□□□□ -0.68
USF2-209ENST00000597671 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.83□□□□□ -0.68
USF2-209ENST00000597671 ABCC1P33527 1531 aa10.83□□□□□ -0.68
USF2-209ENST00000597671 NPHP4O75161 1426 aaPredicted RBP10.83□□□□□ -0.68
USF2-209ENST00000597671 SETBP1Q9Y6X0 1596 aa10.82□□□□□ -0.68
USF2-209ENST00000597671 EP400Q96L91 3159 aa10.81□□□□□ -0.68
USF2-209ENST00000597671 DEPDC5O75140 1603 aa10.8□□□□□ -0.68
USF2-209ENST00000597671 LRP6O75581 1613 aa10.79□□□□□ -0.68
USF2-209ENST00000597671 MED14O60244 1454 aa10.79□□□□□ -0.68
USF2-209ENST00000597671 ANKLE2Q86XL3 938 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms