RNA–Protein interactions for RNA: ENST00000597598.1

SMG9-206, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG9, Length 1,077 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-206ENST00000597598 PTPRTO14522 1441 aa18.36■□□□□ 0.53
SMG9-206ENST00000597598 HNRNPUL2Q1KMD3 747 aaKnown RBP18.36■□□□□ 0.53
SMG9-206ENST00000597598 SAMD9Q5K651 1589 aa18.34■□□□□ 0.53
SMG9-206ENST00000597598 HECW1Q76N89 1606 aa18.34■□□□□ 0.53
SMG9-206ENST00000597598 IQSEC2Q5JU85 1478 aa18.33■□□□□ 0.53
SMG9-206ENST00000597598 PLEKHD1A6NEE1 506 aa18.33■□□□□ 0.52
SMG9-206ENST00000597598 LTBP4Q8N2S1 1624 aa18.32■□□□□ 0.52
SMG9-206ENST00000597598 CEBPAP49715 358 aaPredicted RBP18.32■□□□□ 0.52
SMG9-206ENST00000597598 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.32■□□□□ 0.52
SMG9-206ENST00000597598 SETD1BQ9UPS6 1966 aaKnown RBP18.31■□□□□ 0.52
SMG9-206ENST00000597598 ATP10AO60312 1499 aa18.31■□□□□ 0.52
SMG9-206ENST00000597598 UHRF1BP1Q6BDS2 1440 aa18.31■□□□□ 0.52
SMG9-206ENST00000597598 C9orf84Q5VXU9 1444 aa18.29■□□□□ 0.52
SMG9-206ENST00000597598 SCAPERQ9BY12 1400 aa18.27■□□□□ 0.52
SMG9-206ENST00000597598 PLCH2O75038 1416 aa18.23■□□□□ 0.51
SMG9-206ENST00000597598 NCOA1Q15788 1441 aa18.18■□□□□ 0.5
SMG9-206ENST00000597598 TRAPPC8Q9Y2L5 1435 aa18.16■□□□□ 0.5
SMG9-206ENST00000597598 EFCAB2Q5VUJ9 269 aa18.14■□□□□ 0.49
SMG9-206ENST00000597598 REREQ9P2R6 1566 aa18.13■□□□□ 0.49
SMG9-206ENST00000597598 C3P01024 1663 aa18.13■□□□□ 0.49
SMG9-206ENST00000597598 ZNF518AQ6AHZ1 1483 aa18.13■□□□□ 0.49
SMG9-206ENST00000597598 KDM5CP41229 1560 aa18.12■□□□□ 0.49
SMG9-206ENST00000597598 UBAP1LF5GYI3 381 aa18.11■□□□□ 0.49
SMG9-206ENST00000597598 AFAP1Q8N556 730 aa18.09■□□□□ 0.49
SMG9-206ENST00000597598 CSRNP3Q8WYN3 585 aa18.09■□□□□ 0.49
SMG9-206ENST00000597598 DIP2CQ9Y2E4 1556 aa18.08■□□□□ 0.49
SMG9-206ENST00000597598 AGLP35573 1532 aa18.08■□□□□ 0.49
SMG9-206ENST00000597598 CDK13Q14004 1512 aaKnown RBP18.07■□□□□ 0.48
SMG9-206ENST00000597598 ZNF335Q9H4Z2 1342 aaPredicted RBP18.06■□□□□ 0.48
SMG9-206ENST00000597598 MLH3Q9UHC1 1453 aa18.05■□□□□ 0.48
SMG9-206ENST00000597598 NPATQ14207 1427 aa18.05■□□□□ 0.48
SMG9-206ENST00000597598 CNTLNQ9NXG0 1405 aa18.05■□□□□ 0.48
SMG9-206ENST00000597598 CAMSAP1Q5T5Y3 1602 aa18.05■□□□□ 0.48
SMG9-206ENST00000597598 ESF1Q9H501 851 aaKnown RBP18.04■□□□□ 0.48
SMG9-206ENST00000597598 MYO5CQ9NQX4 1742 aa18.03■□□□□ 0.48
SMG9-206ENST00000597598 RANGAP1P46060 587 aaPredicted RBP18.02■□□□□ 0.48
SMG9-206ENST00000597598 MED1Q15648 1581 aaPredicted RBP18.02■□□□□ 0.48
SMG9-206ENST00000597598 ABCA6Q8N139 1617 aa18.01■□□□□ 0.47
SMG9-206ENST00000597598 NCKAP5LQ9HCH0 1330 aa18■□□□□ 0.47
SMG9-206ENST00000597598 PKD2Q13563 968 aa18■□□□□ 0.47
SMG9-206ENST00000597598 HSPA1LP34931 641 aa17.99■□□□□ 0.47
SMG9-206ENST00000597598 PLA2R1Q13018 1463 aa17.99■□□□□ 0.47
SMG9-206ENST00000597598 TCOF1Q13428 1488 aaKnown RBP17.97■□□□□ 0.47
SMG9-206ENST00000597598 MYT1LQ9UL68 1186 aa17.97■□□□□ 0.47
SMG9-206ENST00000597598 ARHGAP5Q13017 1502 aa17.97■□□□□ 0.47
SMG9-206ENST00000597598 CDK11AQ9UQ88 783 aaPredicted RBP17.96■□□□□ 0.47
SMG9-206ENST00000597598 ZMYM3Q14202 1370 aa17.95■□□□□ 0.46
SMG9-206ENST00000597598 KIF14Q15058 1648 aa17.95■□□□□ 0.46
SMG9-206ENST00000597598 MROH2AA6NES4 1674 aa17.94■□□□□ 0.46
SMG9-206ENST00000597598 TROQ12816 1431 aaPredicted RBP17.93■□□□□ 0.46
SMG9-206ENST00000597598 ZNF142P52746 1687 aaPredicted RBP17.9■□□□□ 0.46
SMG9-206ENST00000597598 TOM1O60784 492 aa17.9■□□□□ 0.46
SMG9-206ENST00000597598 KIDINS220Q9ULH0 1771 aa17.89■□□□□ 0.45
SMG9-206ENST00000597598 ABCC1P33527 1531 aa17.89■□□□□ 0.45
SMG9-206ENST00000597598 PPP6R1Q9UPN7 881 aa17.89■□□□□ 0.45
SMG9-206ENST00000597598 CDC42BPBQ9Y5S2 1711 aa17.88■□□□□ 0.45
SMG9-206ENST00000597598 EEA1Q15075 1411 aa17.88■□□□□ 0.45
SMG9-206ENST00000597598 FMN1Q68DA7 1419 aa17.88■□□□□ 0.45
SMG9-206ENST00000597598 PTPRKQ15262 1439 aa17.87■□□□□ 0.45
SMG9-206ENST00000597598 CEP170BQ9Y4F5 1589 aaPredicted RBP17.87■□□□□ 0.45
SMG9-206ENST00000597598 PIP4K2BP78356 416 aa17.86■□□□□ 0.45
SMG9-206ENST00000597598 CLIP1P30622 1438 aa17.86■□□□□ 0.45
SMG9-206ENST00000597598 MYO3AQ8NEV4 1616 aa17.86■□□□□ 0.45
SMG9-206ENST00000597598 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
SMG9-206ENST00000597598 CPS1P31327 1500 aa17.84■□□□□ 0.45
SMG9-206ENST00000597598 PHF23Q9BUL5 403 aaPredicted RBP17.84■□□□□ 0.45
SMG9-206ENST00000597598 ATP1B4Q9UN42 357 aaPredicted RBP17.84■□□□□ 0.45
SMG9-206ENST00000597598 ITSN2Q9NZM3 1697 aa17.83■□□□□ 0.45
SMG9-206ENST00000597598 PREX2Q70Z35 1606 aa17.81■□□□□ 0.44
SMG9-206ENST00000597598 SHANK2Q9UPX8 1470 aa17.8■□□□□ 0.44
SMG9-206ENST00000597598 SAMD9LQ8IVG5 1584 aa17.79■□□□□ 0.44
SMG9-206ENST00000597598 SUPT6HQ7KZ85 1726 aaKnown RBP17.79■□□□□ 0.44
SMG9-206ENST00000597598 ALKQ9UM73 1620 aa17.79■□□□□ 0.44
SMG9-206ENST00000597598 A2ML1A8K2U0 1454 aa17.78■□□□□ 0.44
SMG9-206ENST00000597598 CLTCQ00610 1675 aaKnown RBP17.77■□□□□ 0.44
SMG9-206ENST00000597598 DNMT1P26358 1616 aaKnown RBP17.76■□□□□ 0.43
SMG9-206ENST00000597598 ARHGAP35Q9NRY4 1499 aa17.76■□□□□ 0.43
SMG9-206ENST00000597598 PLXNC1O60486 1568 aa17.76■□□□□ 0.43
SMG9-206ENST00000597598 NEURL4Q96JN8 1562 aa17.75■□□□□ 0.43
SMG9-206ENST00000597598 SPAG9O60271 1321 aaKnown RBP17.74■□□□□ 0.43
SMG9-206ENST00000597598 RGS17Q9UGC6 210 aaPredicted RBP17.74■□□□□ 0.43
SMG9-206ENST00000597598 LRRIQ1Q96JM4 1722 aa17.73■□□□□ 0.43
SMG9-206ENST00000597598 VWDEQ8N2E2 1590 aa17.71■□□□□ 0.43
SMG9-206ENST00000597598 A2MP01023 1474 aa17.71■□□□□ 0.43
SMG9-206ENST00000597598 GGT6Q6P531 493 aa17.7■□□□□ 0.42
SMG9-206ENST00000597598 POLR1AO95602 1720 aaPredicted RBP17.69■□□□□ 0.42
SMG9-206ENST00000597598 CDC42BPAQ5VT25 1732 aa17.69■□□□□ 0.42
SMG9-206ENST00000597598 ATP7AQ04656 1500 aa17.69■□□□□ 0.42
SMG9-206ENST00000597598 KIAA1107Q9UPP5 1409 aa17.69■□□□□ 0.42
SMG9-206ENST00000597598 HNRNPMP52272 730 aaKnown RBP eCLIP17.68■□□□□ 0.42
SMG9-206ENST00000597598 SYCP2Q9BX26 1530 aa17.67■□□□□ 0.42
SMG9-206ENST00000597598 INO80Q9ULG1 1556 aaPredicted RBP17.67■□□□□ 0.42
SMG9-206ENST00000597598 ANKLE2Q86XL3 938 aa17.67■□□□□ 0.42
SMG9-206ENST00000597598 MED14O60244 1454 aa17.67■□□□□ 0.42
SMG9-206ENST00000597598 CCDC18Q5T9S5 1454 aa17.65■□□□□ 0.42
SMG9-206ENST00000597598 ZNF777Q9ULD5 760 aaPredicted RBP17.65■□□□□ 0.42
SMG9-206ENST00000597598 GPATCH8Q9UKJ3 1502 aaKnown RBP17.64■□□□□ 0.41
SMG9-206ENST00000597598 TNRQ92752 1358 aa17.64■□□□□ 0.41
SMG9-206ENST00000597598 UBTFP17480 764 aaKnown RBP17.62■□□□□ 0.41
SMG9-206ENST00000597598 THEMISQ8N1K5 641 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms