RNA–Protein interactions for RNA: ENST00000596240.5

LINC00347-204, long intergenic non-protein coding RNA 347, humanhuman

TSL 3

Gene LINC00347, Length 802 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-204ENST00000596240 ABCC10Q5T3U5 1492 aa13.7□□□□□ -0.22
LINC00347-204ENST00000596240 NUBP1P53384 320 aa13.7□□□□□ -0.22
LINC00347-204ENST00000596240 ZBTB47Q9UFB7 747 aaPredicted RBP13.68□□□□□ -0.22
LINC00347-204ENST00000596240 PRXQ9BXM0 1461 aa13.67□□□□□ -0.22
LINC00347-204ENST00000596240 ABCC2Q92887 1545 aa13.66□□□□□ -0.22
LINC00347-204ENST00000596240 PPRC1Q5VV67 1664 aaKnown RBP13.66□□□□□ -0.22
LINC00347-204ENST00000596240 TNIKQ9UKE5 1360 aa13.65□□□□□ -0.22
LINC00347-204ENST00000596240 TSPOAP1O95153 1857 aa13.65□□□□□ -0.22
LINC00347-204ENST00000596240 CARMIL2Q6F5E8 1435 aa13.64□□□□□ -0.23
LINC00347-204ENST00000596240 UHRF1BP1LA0JNW5 1464 aa13.64□□□□□ -0.23
LINC00347-204ENST00000596240 ZCCHC11Q5TAX3 1644 aaKnown RBP13.64□□□□□ -0.23
LINC00347-204ENST00000596240 TSPYL2Q9H2G4 693 aaPredicted RBP13.63□□□□□ -0.23
LINC00347-204ENST00000596240 ZRANB1Q9UGI0 708 aa13.63□□□□□ -0.23
LINC00347-204ENST00000596240 PTPRGP23470 1445 aa13.63□□□□□ -0.23
LINC00347-204ENST00000596240 KDM5BQ9UGL1 1544 aa13.59□□□□□ -0.23
LINC00347-204ENST00000596240 SPOCK2Q92563 424 aa13.59□□□□□ -0.23
LINC00347-204ENST00000596240 GLI2P10070 1586 aa13.58□□□□□ -0.23
LINC00347-204ENST00000596240 EEA1Q15075 1411 aa13.58□□□□□ -0.24
LINC00347-204ENST00000596240 UACAQ9BZF9 1416 aa13.58□□□□□ -0.24
LINC00347-204ENST00000596240 ABCA8O94911 1581 aa13.58□□□□□ -0.24
LINC00347-204ENST00000596240 MAP3K4Q9Y6R4 1608 aa13.57□□□□□ -0.24
LINC00347-204ENST00000596240 FAM9AQ8IZU1 332 aaPredicted RBP13.57□□□□□ -0.24
LINC00347-204ENST00000596240 SP7Q8TDD2 431 aaPredicted RBP13.57□□□□□ -0.24
LINC00347-204ENST00000596240 SAMD9Q5K651 1589 aa13.57□□□□□ -0.24
LINC00347-204ENST00000596240 KDM6BO15054 1643 aa13.57□□□□□ -0.24
LINC00347-204ENST00000596240 ASXL2Q76L83 1435 aa13.56□□□□□ -0.24
LINC00347-204ENST00000596240 PHF12Q96QT6 1004 aa13.56□□□□□ -0.24
LINC00347-204ENST00000596240 PLB1Q6P1J6 1458 aa13.55□□□□□ -0.24
LINC00347-204ENST00000596240 PAK3O75914 559 aaPredicted RBP13.54□□□□□ -0.24
LINC00347-204ENST00000596240 FAM69CQ0P6D2 419 aa13.53□□□□□ -0.24
LINC00347-204ENST00000596240 ZNF579Q8NAF0 562 aaKnown RBP13.53□□□□□ -0.24
LINC00347-204ENST00000596240 CCDC61Q9Y6R9 512 aa13.53□□□□□ -0.24
LINC00347-204ENST00000596240 GOLGA3Q08378 1498 aa13.53□□□□□ -0.24
LINC00347-204ENST00000596240 TTBK1Q5TCY1 1321 aaPredicted RBP13.52□□□□□ -0.25
LINC00347-204ENST00000596240 EPRSP07814 1512 aaKnown RBP13.52□□□□□ -0.25
LINC00347-204ENST00000596240 KIF21BO75037 1637 aa13.5□□□□□ -0.25
LINC00347-204ENST00000596240 DCAF8Q5TAQ9 597 aa13.5□□□□□ -0.25
LINC00347-204ENST00000596240 FAM212AQ96EL1 285 aa13.5□□□□□ -0.25
LINC00347-204ENST00000596240 LOC105371045A0A1W2PR82 267 aa13.49□□□□□ -0.25
LINC00347-204ENST00000596240 WDR7Q9Y4E6 1490 aa13.48□□□□□ -0.25
LINC00347-204ENST00000596240 CFAP43Q8NDM7 1665 aa13.47□□□□□ -0.25
LINC00347-204ENST00000596240 GABBR2O75899 941 aa13.46□□□□□ -0.25
LINC00347-204ENST00000596240 RAPGEF6Q8TEU7 1601 aa13.45□□□□□ -0.26
LINC00347-204ENST00000596240 CIZ1Q9ULV3 898 aaPredicted RBP13.43□□□□□ -0.26
LINC00347-204ENST00000596240 COL17A1Q9UMD9 1497 aaPredicted RBP13.42□□□□□ -0.26
LINC00347-204ENST00000596240 KIF12Q96FN5 646 aa13.41□□□□□ -0.26
LINC00347-204ENST00000596240 PYGBP11216 843 aa13.4□□□□□ -0.26
LINC00347-204ENST00000596240 GALR2O43603 387 aaPredicted RBP13.39□□□□□ -0.27
LINC00347-204ENST00000596240 GSE1Q14687 1217 aa13.39□□□□□ -0.27
LINC00347-204ENST00000596240 TEX14Q8IWB6 1497 aa13.39□□□□□ -0.27
LINC00347-204ENST00000596240 ABCA9Q8IUA7 1624 aa13.39□□□□□ -0.27
LINC00347-204ENST00000596240 EFCAB5A4FU69 1503 aa13.39□□□□□ -0.27
LINC00347-204ENST00000596240 MAP3K13O43283 966 aa13.38□□□□□ -0.27
LINC00347-204ENST00000596240 MS4A3Q96HJ5 214 aa13.38□□□□□ -0.27
LINC00347-204ENST00000596240 NUP153P49790 1475 aaKnown RBP13.37□□□□□ -0.27
LINC00347-204ENST00000596240 MAGI3Q5TCQ9 1506 aa13.37□□□□□ -0.27
LINC00347-204ENST00000596240 FHOD3Q2V2M9 1422 aa13.37□□□□□ -0.27
LINC00347-204ENST00000596240 ATP10BO94823 1461 aa13.36□□□□□ -0.27
LINC00347-204ENST00000596240 P3H3Q8IVL6 736 aa13.31□□□□□ -0.28
LINC00347-204ENST00000596240 CD109Q6YHK3 1445 aa13.3□□□□□ -0.28
LINC00347-204ENST00000596240 LRRIQ1Q96JM4 1722 aa13.3□□□□□ -0.28
LINC00347-204ENST00000596240 FRMPD1Q5SYB0 1578 aa13.3□□□□□ -0.28
LINC00347-204ENST00000596240 UBTFP17480 764 aaKnown RBP13.3□□□□□ -0.28
LINC00347-204ENST00000596240 PKD2Q13563 968 aa13.3□□□□□ -0.28
LINC00347-204ENST00000596240 TRPC6Q9Y210 931 aa13.3□□□□□ -0.28
LINC00347-204ENST00000596240 PCDHB13Q9Y5F0 798 aa13.29□□□□□ -0.28
LINC00347-204ENST00000596240 TTC37Q6PGP7 1564 aa13.28□□□□□ -0.28
LINC00347-204ENST00000596240 ADGRL1O94910 1474 aa13.28□□□□□ -0.28
LINC00347-204ENST00000596240 ARID3CA6NKF2 412 aa13.27□□□□□ -0.29
LINC00347-204ENST00000596240 IFNL1Q8IU54 200 aa13.27□□□□□ -0.29
LINC00347-204ENST00000596240 ARHGAP35Q9NRY4 1499 aa13.27□□□□□ -0.29
LINC00347-204ENST00000596240 CDK13Q14004 1512 aaKnown RBP13.27□□□□□ -0.29
LINC00347-204ENST00000596240 KDM4FA0A1W2PPD8 638 aa13.26□□□□□ -0.29
LINC00347-204ENST00000596240 ARAP3Q8WWN8 1544 aa13.26□□□□□ -0.29
LINC00347-204ENST00000596240 PCDHB8Q9UN66 801 aa13.26□□□□□ -0.29
LINC00347-204ENST00000596240 HECW1Q76N89 1606 aa13.25□□□□□ -0.29
LINC00347-204ENST00000596240 POTEIP0CG38 1075 aa13.25□□□□□ -0.29
LINC00347-204ENST00000596240 RICTORQ6R327 1708 aa13.25□□□□□ -0.29
LINC00347-204ENST00000596240 CHRM1P11229 460 aaPredicted RBP13.24□□□□□ -0.29
LINC00347-204ENST00000596240 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC00347-204ENST00000596240 CLCN6P51797 869 aa13.23□□□□□ -0.29
LINC00347-204ENST00000596240 KCNH8Q96L42 1107 aa13.22□□□□□ -0.29
LINC00347-204ENST00000596240 PCF11O94913 1555 aaKnown RBP13.21□□□□□ -0.29
LINC00347-204ENST00000596240 CFAP74Q9C0B2 1584 aa13.21□□□□□ -0.29
LINC00347-204ENST00000596240 RANGAP1P46060 587 aaPredicted RBP13.21□□□□□ -0.29
LINC00347-204ENST00000596240 RNF25Q96BH1 459 aaPredicted RBP13.21□□□□□ -0.29
LINC00347-204ENST00000596240 NEO1Q92859 1461 aa13.21□□□□□ -0.3
LINC00347-204ENST00000596240 KIF14Q15058 1648 aa13.21□□□□□ -0.3
LINC00347-204ENST00000596240 ARHGEF40Q8TER5 1519 aa13.2□□□□□ -0.3
LINC00347-204ENST00000596240 CEP162Q5TB80 1403 aa13.2□□□□□ -0.3
LINC00347-204ENST00000596240 SGIP1Q9BQI5 828 aa13.19□□□□□ -0.3
LINC00347-204ENST00000596240 MYO5CQ9NQX4 1742 aa13.19□□□□□ -0.3
LINC00347-204ENST00000596240 SIGLEC1Q9BZZ2 1709 aa13.18□□□□□ -0.3
LINC00347-204ENST00000596240 ECM2O94769 699 aaPredicted RBP13.17□□□□□ -0.3
LINC00347-204ENST00000596240 FMN1Q68DA7 1419 aa13.16□□□□□ -0.3
LINC00347-204ENST00000596240 ZMYM4Q5VZL5 1548 aa13.16□□□□□ -0.3
LINC00347-204ENST00000596240 ADAMTSL3P82987 1691 aa13.15□□□□□ -0.3
LINC00347-204ENST00000596240 DCBLD2Q96PD2 775 aa13.15□□□□□ -0.3
LINC00347-204ENST00000596240 BMP2KQ9NSY1 1161 aaPredicted RBP13.15□□□□□ -0.3
LINC00347-204ENST00000596240 FANCAO15360 1455 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms