RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 HECW1Q76N89 1606 aa16.41■□□□□ 0.22
NOTCH3-202ENST00000595045 EEA1Q15075 1411 aa16.41■□□□□ 0.22
NOTCH3-202ENST00000595045 SOCS7O14512 581 aa16.39■□□□□ 0.21
NOTCH3-202ENST00000595045 PREX1Q8TCU6 1659 aa16.39■□□□□ 0.21
NOTCH3-202ENST00000595045 ARHGEF12Q9NZN5 1544 aa16.39■□□□□ 0.21
NOTCH3-202ENST00000595045 SCAPERQ9BY12 1400 aa16.36■□□□□ 0.21
NOTCH3-202ENST00000595045 STRCQ7RTU9 1775 aa16.36■□□□□ 0.21
NOTCH3-202ENST00000595045 ATP10AO60312 1499 aa16.35■□□□□ 0.21
NOTCH3-202ENST00000595045 CEBPAP49715 358 aaPredicted RBP16.34■□□□□ 0.21
NOTCH3-202ENST00000595045 SETD1BQ9UPS6 1966 aaKnown RBP16.33■□□□□ 0.21
NOTCH3-202ENST00000595045 PLCH2O75038 1416 aa16.33■□□□□ 0.2
NOTCH3-202ENST00000595045 C9orf84Q5VXU9 1444 aa16.33■□□□□ 0.2
NOTCH3-202ENST00000595045 CDK13Q14004 1512 aaKnown RBP16.32■□□□□ 0.2
NOTCH3-202ENST00000595045 DMRT2Q9Y5R5 561 aa16.32■□□□□ 0.2
NOTCH3-202ENST00000595045 UHRF1BP1Q6BDS2 1440 aa16.29■□□□□ 0.2
NOTCH3-202ENST00000595045 SPATA31D1Q6ZQQ2 1576 aa16.29■□□□□ 0.2
NOTCH3-202ENST00000595045 MYO5CQ9NQX4 1742 aa16.26■□□□□ 0.19
NOTCH3-202ENST00000595045 EFCAB2Q5VUJ9 269 aa16.26■□□□□ 0.19
NOTCH3-202ENST00000595045 PTPRTO14522 1441 aa16.25■□□□□ 0.19
NOTCH3-202ENST00000595045 ZNF518AQ6AHZ1 1483 aa16.23■□□□□ 0.19
NOTCH3-202ENST00000595045 ARHGAP35Q9NRY4 1499 aa16.23■□□□□ 0.19
NOTCH3-202ENST00000595045 EHMT2Q96KQ7 1210 aa16.23■□□□□ 0.19
NOTCH3-202ENST00000595045 KDM5CP41229 1560 aa16.22■□□□□ 0.19
NOTCH3-202ENST00000595045 C3P01024 1663 aa16.22■□□□□ 0.19
NOTCH3-202ENST00000595045 CHIC1Q5VXU3 224 aa16.22■□□□□ 0.19
NOTCH3-202ENST00000595045 AFAP1Q8N556 730 aa16.22■□□□□ 0.19
NOTCH3-202ENST00000595045 LTBP4Q8N2S1 1624 aa16.21■□□□□ 0.19
NOTCH3-202ENST00000595045 DIP2CQ9Y2E4 1556 aa16.21■□□□□ 0.18
NOTCH3-202ENST00000595045 KIF14Q15058 1648 aa16.2■□□□□ 0.18
NOTCH3-202ENST00000595045 REREQ9P2R6 1566 aa16.19■□□□□ 0.18
NOTCH3-202ENST00000595045 UBTFP17480 764 aaKnown RBP16.19■□□□□ 0.18
NOTCH3-202ENST00000595045 ATP1B4Q9UN42 357 aaPredicted RBP16.18■□□□□ 0.18
NOTCH3-202ENST00000595045 ARHGAP5Q13017 1502 aa16.18■□□□□ 0.18
NOTCH3-202ENST00000595045 IQSEC2Q5JU85 1478 aa16.17■□□□□ 0.18
NOTCH3-202ENST00000595045 ABCA6Q8N139 1617 aa16.17■□□□□ 0.18
NOTCH3-202ENST00000595045 MYT1LQ9UL68 1186 aa16.17■□□□□ 0.18
NOTCH3-202ENST00000595045 FMN1Q68DA7 1419 aa16.17■□□□□ 0.18
NOTCH3-202ENST00000595045 TRAPPC8Q9Y2L5 1435 aa16.16■□□□□ 0.18
NOTCH3-202ENST00000595045 NCOA1Q15788 1441 aa16.15■□□□□ 0.18
NOTCH3-202ENST00000595045 CDK11AQ9UQ88 783 aaPredicted RBP16.15■□□□□ 0.18
NOTCH3-202ENST00000595045 MLH3Q9UHC1 1453 aa16.15■□□□□ 0.18
NOTCH3-202ENST00000595045 AGLP35573 1532 aa16.14■□□□□ 0.18
NOTCH3-202ENST00000595045 TROQ12816 1431 aaPredicted RBP16.14■□□□□ 0.17
NOTCH3-202ENST00000595045 ESF1Q9H501 851 aaKnown RBP16.13■□□□□ 0.17
NOTCH3-202ENST00000595045 CDC42BPBQ9Y5S2 1711 aa16.12■□□□□ 0.17
NOTCH3-202ENST00000595045 CLIP1P30622 1438 aa16.11■□□□□ 0.17
NOTCH3-202ENST00000595045 CNTLNQ9NXG0 1405 aa16.1■□□□□ 0.17
NOTCH3-202ENST00000595045 CAMSAP1Q5T5Y3 1602 aa16.09■□□□□ 0.17
NOTCH3-202ENST00000595045 LRRIQ1Q96JM4 1722 aa16.09■□□□□ 0.17
NOTCH3-202ENST00000595045 ABCC1P33527 1531 aa16.09■□□□□ 0.17
NOTCH3-202ENST00000595045 KIDINS220Q9ULH0 1771 aa16.08■□□□□ 0.17
NOTCH3-202ENST00000595045 PREX2Q70Z35 1606 aa16.07■□□□□ 0.16
NOTCH3-202ENST00000595045 ITSN2Q9NZM3 1697 aa16.07■□□□□ 0.16
NOTCH3-202ENST00000595045 NPATQ14207 1427 aa16.06■□□□□ 0.16
NOTCH3-202ENST00000595045 ZNF335Q9H4Z2 1342 aaPredicted RBP16.05■□□□□ 0.16
NOTCH3-202ENST00000595045 NCKAP5LQ9HCH0 1330 aa16.05■□□□□ 0.16
NOTCH3-202ENST00000595045 UBAP1LF5GYI3 381 aa16.05■□□□□ 0.16
NOTCH3-202ENST00000595045 MROH2AA6NES4 1674 aa16.05■□□□□ 0.16
NOTCH3-202ENST00000595045 CASKIN1Q8WXD9 1431 aa16.04■□□□□ 0.16
NOTCH3-202ENST00000595045 ZMYM3Q14202 1370 aa16.02■□□□□ 0.16
NOTCH3-202ENST00000595045 CDC42BPAQ5VT25 1732 aa16■□□□□ 0.15
NOTCH3-202ENST00000595045 SAMD9LQ8IVG5 1584 aa16■□□□□ 0.15
NOTCH3-202ENST00000595045 ZNF142P52746 1687 aaPredicted RBP15.99■□□□□ 0.15
NOTCH3-202ENST00000595045 PLA2R1Q13018 1463 aa15.98■□□□□ 0.15
NOTCH3-202ENST00000595045 MYO3AQ8NEV4 1616 aa15.98■□□□□ 0.15
NOTCH3-202ENST00000595045 PKD2Q13563 968 aa15.98■□□□□ 0.15
NOTCH3-202ENST00000595045 SUPT6HQ7KZ85 1726 aaKnown RBP15.98■□□□□ 0.15
NOTCH3-202ENST00000595045 TCOF1Q13428 1488 aaKnown RBP15.97■□□□□ 0.15
NOTCH3-202ENST00000595045 CLTCQ00610 1675 aaKnown RBP15.97■□□□□ 0.15
NOTCH3-202ENST00000595045 CEP170BQ9Y4F5 1589 aaPredicted RBP15.96■□□□□ 0.15
NOTCH3-202ENST00000595045 PTPRKQ15262 1439 aa15.95■□□□□ 0.14
NOTCH3-202ENST00000595045 CCDC18Q5T9S5 1454 aa15.95■□□□□ 0.14
NOTCH3-202ENST00000595045 SPAG9O60271 1321 aaKnown RBP15.94■□□□□ 0.14
NOTCH3-202ENST00000595045 SYCP2Q9BX26 1530 aa15.94■□□□□ 0.14
NOTCH3-202ENST00000595045 GPATCH8Q9UKJ3 1502 aaKnown RBP15.94■□□□□ 0.14
NOTCH3-202ENST00000595045 PLXNC1O60486 1568 aa15.93■□□□□ 0.14
NOTCH3-202ENST00000595045 MED1Q15648 1581 aaPredicted RBP15.93■□□□□ 0.14
NOTCH3-202ENST00000595045 ZNF777Q9ULD5 760 aaPredicted RBP15.93■□□□□ 0.14
NOTCH3-202ENST00000595045 PPP6R1Q9UPN7 881 aa15.93■□□□□ 0.14
NOTCH3-202ENST00000595045 HSPA1LP34931 641 aa15.92■□□□□ 0.14
NOTCH3-202ENST00000595045 HNRNPMP52272 730 aaKnown RBP eCLIP15.92■□□□□ 0.14
NOTCH3-202ENST00000595045 ATP7AQ04656 1500 aa15.92■□□□□ 0.14
NOTCH3-202ENST00000595045 A2MP01023 1474 aa15.91■□□□□ 0.14
NOTCH3-202ENST00000595045 INO80Q9ULG1 1556 aaPredicted RBP15.9■□□□□ 0.14
NOTCH3-202ENST00000595045 SCAF1Q9H7N4 1312 aaKnown RBP15.9■□□□□ 0.14
NOTCH3-202ENST00000595045 FYCO1Q9BQS8 1478 aa15.9■□□□□ 0.14
NOTCH3-202ENST00000595045 PIP4K2BP78356 416 aa15.89■□□□□ 0.13
NOTCH3-202ENST00000595045 GGT6Q6P531 493 aa15.89■□□□□ 0.13
NOTCH3-202ENST00000595045 KIAA1107Q9UPP5 1409 aa15.88■□□□□ 0.13
NOTCH3-202ENST00000595045 DNMT1P26358 1616 aaKnown RBP15.87■□□□□ 0.13
NOTCH3-202ENST00000595045 A2ML1A8K2U0 1454 aa15.87■□□□□ 0.13
NOTCH3-202ENST00000595045 ZNF644Q9H582 1327 aaPredicted RBP15.86■□□□□ 0.13
NOTCH3-202ENST00000595045 CPS1P31327 1500 aa15.85■□□□□ 0.13
NOTCH3-202ENST00000595045 TOM1O60784 492 aa15.85■□□□□ 0.13
NOTCH3-202ENST00000595045 CFDP1Q9UEE9 299 aaPredicted RBP15.85■□□□□ 0.13
NOTCH3-202ENST00000595045 POLR1AO95602 1720 aaPredicted RBP15.85■□□□□ 0.13
NOTCH3-202ENST00000595045 PLEKHH2Q8IVE3 1493 aa15.84■□□□□ 0.13
NOTCH3-202ENST00000595045 NEURL4Q96JN8 1562 aa15.84■□□□□ 0.13
NOTCH3-202ENST00000595045 SHANK2Q9UPX8 1470 aa15.84■□□□□ 0.13
NOTCH3-202ENST00000595045 ADGBQ8N7X0 1667 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms