RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 HECW1Q76N89 1606 aa15.59■□□□□ 0.09
SRRM1-221ENST00000593639 CEBPAP49715 358 aaPredicted RBP15.59■□□□□ 0.09
SRRM1-221ENST00000593639 DISP3Q9P2K9 1392 aa15.59■□□□□ 0.09
SRRM1-221ENST00000593639 PLCH2O75038 1416 aa15.58■□□□□ 0.08
SRRM1-221ENST00000593639 ARHGEF12Q9NZN5 1544 aa15.57■□□□□ 0.08
SRRM1-221ENST00000593639 ATP10AO60312 1499 aa15.56■□□□□ 0.08
SRRM1-221ENST00000593639 CDK13Q14004 1512 aaKnown RBP15.55■□□□□ 0.08
SRRM1-221ENST00000593639 C9orf84Q5VXU9 1444 aa15.55■□□□□ 0.08
SRRM1-221ENST00000593639 SOCS7O14512 581 aa15.55■□□□□ 0.08
SRRM1-221ENST00000593639 FER1L4A9Z1Z3 1794 aa15.52■□□□□ 0.08
SRRM1-221ENST00000593639 DMRT2Q9Y5R5 561 aa15.52■□□□□ 0.08
SRRM1-221ENST00000593639 EFCAB2Q5VUJ9 269 aa15.51■□□□□ 0.07
SRRM1-221ENST00000593639 AFAP1Q8N556 730 aa15.49■□□□□ 0.07
SRRM1-221ENST00000593639 EEA1Q15075 1411 aa15.49■□□□□ 0.07
SRRM1-221ENST00000593639 UHRF1BP1Q6BDS2 1440 aa15.49■□□□□ 0.07
SRRM1-221ENST00000593639 PREX1Q8TCU6 1659 aa15.47■□□□□ 0.07
SRRM1-221ENST00000593639 ATP1B4Q9UN42 357 aaPredicted RBP15.46■□□□□ 0.07
SRRM1-221ENST00000593639 STRCQ7RTU9 1775 aa15.45■□□□□ 0.06
SRRM1-221ENST00000593639 ZNF518AQ6AHZ1 1483 aa15.45■□□□□ 0.06
SRRM1-221ENST00000593639 PTPRTO14522 1441 aa15.44■□□□□ 0.06
SRRM1-221ENST00000593639 MYT1LQ9UL68 1186 aa15.43■□□□□ 0.06
SRRM1-221ENST00000593639 CDK11AQ9UQ88 783 aaPredicted RBP15.42■□□□□ 0.06
SRRM1-221ENST00000593639 KDM5CP41229 1560 aa15.41■□□□□ 0.06
SRRM1-221ENST00000593639 ARHGAP5Q13017 1502 aa15.4■□□□□ 0.06
SRRM1-221ENST00000593639 TROQ12816 1431 aaPredicted RBP15.4■□□□□ 0.06
SRRM1-221ENST00000593639 FMN1Q68DA7 1419 aa15.4■□□□□ 0.06
SRRM1-221ENST00000593639 SPATA31D1Q6ZQQ2 1576 aa15.4■□□□□ 0.06
SRRM1-221ENST00000593639 DIP2CQ9Y2E4 1556 aa15.4■□□□□ 0.06
SRRM1-221ENST00000593639 KIF14Q15058 1648 aa15.39■□□□□ 0.05
SRRM1-221ENST00000593639 LTBP4Q8N2S1 1624 aa15.39■□□□□ 0.05
SRRM1-221ENST00000593639 TRAPPC8Q9Y2L5 1435 aa15.39■□□□□ 0.05
SRRM1-221ENST00000593639 EHMT2Q96KQ7 1210 aa15.38■□□□□ 0.05
SRRM1-221ENST00000593639 MLH3Q9UHC1 1453 aa15.38■□□□□ 0.05
SRRM1-221ENST00000593639 REREQ9P2R6 1566 aa15.37■□□□□ 0.05
SRRM1-221ENST00000593639 NCOA1Q15788 1441 aa15.37■□□□□ 0.05
SRRM1-221ENST00000593639 MYO5CQ9NQX4 1742 aa15.37■□□□□ 0.05
SRRM1-221ENST00000593639 ARHGAP35Q9NRY4 1499 aa15.36■□□□□ 0.05
SRRM1-221ENST00000593639 ESF1Q9H501 851 aaKnown RBP15.36■□□□□ 0.05
SRRM1-221ENST00000593639 AGLP35573 1532 aa15.35■□□□□ 0.05
SRRM1-221ENST00000593639 UBTFP17480 764 aaKnown RBP15.35■□□□□ 0.05
SRRM1-221ENST00000593639 ABCA6Q8N139 1617 aa15.35■□□□□ 0.05
SRRM1-221ENST00000593639 CLIP1P30622 1438 aa15.34■□□□□ 0.05
SRRM1-221ENST00000593639 IQSEC2Q5JU85 1478 aa15.33■□□□□ 0.05
SRRM1-221ENST00000593639 C3P01024 1663 aa15.33■□□□□ 0.04
SRRM1-221ENST00000593639 SETD1BQ9UPS6 1966 aaKnown RBP15.33■□□□□ 0.04
SRRM1-221ENST00000593639 CNTLNQ9NXG0 1405 aa15.32■□□□□ 0.04
SRRM1-221ENST00000593639 ABCC1P33527 1531 aa15.3■□□□□ 0.04
SRRM1-221ENST00000593639 ZNF335Q9H4Z2 1342 aaPredicted RBP15.3■□□□□ 0.04
SRRM1-221ENST00000593639 NCKAP5LQ9HCH0 1330 aa15.3■□□□□ 0.04
SRRM1-221ENST00000593639 NPATQ14207 1427 aa15.28■□□□□ 0.04
SRRM1-221ENST00000593639 ZMYM3Q14202 1370 aa15.28■□□□□ 0.04
SRRM1-221ENST00000593639 CAMSAP1Q5T5Y3 1602 aa15.28■□□□□ 0.04
SRRM1-221ENST00000593639 UBAP1LF5GYI3 381 aa15.27■□□□□ 0.04
SRRM1-221ENST00000593639 CDC42BPBQ9Y5S2 1711 aa15.25■□□□□ 0.03
SRRM1-221ENST00000593639 PREX2Q70Z35 1606 aa15.24■□□□□ 0.03
SRRM1-221ENST00000593639 KIDINS220Q9ULH0 1771 aa15.23■□□□□ 0.03
SRRM1-221ENST00000593639 ZNF777Q9ULD5 760 aaPredicted RBP15.22■□□□□ 0.03
SRRM1-221ENST00000593639 ITSN2Q9NZM3 1697 aa15.22■□□□□ 0.03
SRRM1-221ENST00000593639 SPAG9O60271 1321 aaKnown RBP15.21■□□□□ 0.03
SRRM1-221ENST00000593639 SAMD9LQ8IVG5 1584 aa15.21■□□□□ 0.03
SRRM1-221ENST00000593639 CASKIN1Q8WXD9 1431 aa15.21■□□□□ 0.03
SRRM1-221ENST00000593639 PKD2Q13563 968 aa15.21■□□□□ 0.03
SRRM1-221ENST00000593639 PLA2R1Q13018 1463 aa15.2■□□□□ 0.02
SRRM1-221ENST00000593639 LRRIQ1Q96JM4 1722 aa15.2■□□□□ 0.02
SRRM1-221ENST00000593639 PTPRKQ15262 1439 aa15.2■□□□□ 0.02
SRRM1-221ENST00000593639 HNRNPMP52272 730 aaKnown RBP eCLIP15.2■□□□□ 0.02
SRRM1-221ENST00000593639 TCOF1Q13428 1488 aaKnown RBP15.2■□□□□ 0.02
SRRM1-221ENST00000593639 CCDC18Q5T9S5 1454 aa15.19■□□□□ 0.02
SRRM1-221ENST00000593639 PPP6R1Q9UPN7 881 aa15.18■□□□□ 0.02
SRRM1-221ENST00000593639 SYCP2Q9BX26 1530 aa15.17■□□□□ 0.02
SRRM1-221ENST00000593639 GGT6Q6P531 493 aa15.17■□□□□ 0.02
SRRM1-221ENST00000593639 GPATCH8Q9UKJ3 1502 aaKnown RBP15.17■□□□□ 0.02
SRRM1-221ENST00000593639 MROH2AA6NES4 1674 aa15.16■□□□□ 0.02
SRRM1-221ENST00000593639 HSPA1LP34931 641 aa15.16■□□□□ 0.02
SRRM1-221ENST00000593639 CEP170BQ9Y4F5 1589 aaPredicted RBP15.15■□□□□ 0.02
SRRM1-221ENST00000593639 A2MP01023 1474 aa15.15■□□□□ 0.02
SRRM1-221ENST00000593639 PLXNC1O60486 1568 aa15.15■□□□□ 0.02
SRRM1-221ENST00000593639 MYO3AQ8NEV4 1616 aa15.14■□□□□ 0.01
SRRM1-221ENST00000593639 KIAA1107Q9UPP5 1409 aa15.14■□□□□ 0.01
SRRM1-221ENST00000593639 ATP7AQ04656 1500 aa15.13■□□□□ 0.01
SRRM1-221ENST00000593639 PIP4K2BP78356 416 aa15.13■□□□□ 0.01
SRRM1-221ENST00000593639 SCAF1Q9H7N4 1312 aaKnown RBP15.13■□□□□ 0.01
SRRM1-221ENST00000593639 CDC42BPAQ5VT25 1732 aa15.12■□□□□ 0.01
SRRM1-221ENST00000593639 CFDP1Q9UEE9 299 aaPredicted RBP15.12■□□□□ 0.01
SRRM1-221ENST00000593639 ZNF142P52746 1687 aaPredicted RBP15.11■□□□□ 0.01
SRRM1-221ENST00000593639 CLTCQ00610 1675 aaKnown RBP15.11■□□□□ 0.01
SRRM1-221ENST00000593639 SUPT6HQ7KZ85 1726 aaKnown RBP15.11■□□□□ 0.01
SRRM1-221ENST00000593639 A2ML1A8K2U0 1454 aa15.09■□□□□ 0.01
SRRM1-221ENST00000593639 PLEKHH2Q8IVE3 1493 aa15.09■□□□□ 0.01
SRRM1-221ENST00000593639 FYCO1Q9BQS8 1478 aa15.09■□□□□ 0.01
SRRM1-221ENST00000593639 TOM1O60784 492 aa15.09■□□□□ 0.01
SRRM1-221ENST00000593639 MED1Q15648 1581 aaPredicted RBP15.09■□□□□ 0.01
SRRM1-221ENST00000593639 INO80Q9ULG1 1556 aaPredicted RBP15.09■□□□□ 0.01
SRRM1-221ENST00000593639 FBXO31Q5XUX0 539 aaPredicted RBP15.07■□□□□ 0
SRRM1-221ENST00000593639 ZNF644Q9H582 1327 aaPredicted RBP15.07■□□□□ 0
SRRM1-221ENST00000593639 CCNB3Q8WWL7 1395 aa15.07■□□□□ 0
SRRM1-221ENST00000593639 SHANK2Q9UPX8 1470 aa15.06■□□□□ 0
SRRM1-221ENST00000593639 TNRQ92752 1358 aa15.05■□□□□ -0
SRRM1-221ENST00000593639 CPS1P31327 1500 aa15.05■□□□□ -0
SRRM1-221ENST00000593639 DNMT1P26358 1616 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms