RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 SCAPERQ9BY12 1400 aa17.15■□□□□ 0.34
SMCO4P1-201ENST00000592909 SOCS7O14512 581 aa17.15■□□□□ 0.34
SMCO4P1-201ENST00000592909 HECW1Q76N89 1606 aa17.14■□□□□ 0.33
SMCO4P1-201ENST00000592909 PLCH2O75038 1416 aa17.14■□□□□ 0.33
SMCO4P1-201ENST00000592909 ATP10AO60312 1499 aa17.13■□□□□ 0.33
SMCO4P1-201ENST00000592909 ARHGEF12Q9NZN5 1544 aa17.13■□□□□ 0.33
SMCO4P1-201ENST00000592909 CEBPAP49715 358 aaPredicted RBP17.12■□□□□ 0.33
SMCO4P1-201ENST00000592909 C9orf84Q5VXU9 1444 aa17.11■□□□□ 0.33
SMCO4P1-201ENST00000592909 EFCAB2Q5VUJ9 269 aa17.1■□□□□ 0.33
SMCO4P1-201ENST00000592909 FER1L4A9Z1Z3 1794 aa17.1■□□□□ 0.33
SMCO4P1-201ENST00000592909 EEA1Q15075 1411 aa17.07■□□□□ 0.32
SMCO4P1-201ENST00000592909 UHRF1BP1Q6BDS2 1440 aa17.05■□□□□ 0.32
SMCO4P1-201ENST00000592909 PREX1Q8TCU6 1659 aa17.05■□□□□ 0.32
SMCO4P1-201ENST00000592909 CDK13Q14004 1512 aaKnown RBP17.05■□□□□ 0.32
SMCO4P1-201ENST00000592909 PTPRTO14522 1441 aa17.04■□□□□ 0.32
SMCO4P1-201ENST00000592909 AFAP1Q8N556 730 aa17.02■□□□□ 0.32
SMCO4P1-201ENST00000592909 STRCQ7RTU9 1775 aa17.02■□□□□ 0.31
SMCO4P1-201ENST00000592909 ZNF518AQ6AHZ1 1483 aa17.01■□□□□ 0.31
SMCO4P1-201ENST00000592909 CDK11AQ9UQ88 783 aaPredicted RBP17.01■□□□□ 0.31
SMCO4P1-201ENST00000592909 SETD1BQ9UPS6 1966 aaKnown RBP17■□□□□ 0.31
SMCO4P1-201ENST00000592909 KDM5CP41229 1560 aa16.97■□□□□ 0.31
SMCO4P1-201ENST00000592909 MYT1LQ9UL68 1186 aa16.96■□□□□ 0.31
SMCO4P1-201ENST00000592909 ATP1B4Q9UN42 357 aaPredicted RBP16.96■□□□□ 0.31
SMCO4P1-201ENST00000592909 FMN1Q68DA7 1419 aa16.96■□□□□ 0.3
SMCO4P1-201ENST00000592909 TRAPPC8Q9Y2L5 1435 aa16.96■□□□□ 0.3
SMCO4P1-201ENST00000592909 REREQ9P2R6 1566 aa16.95■□□□□ 0.3
SMCO4P1-201ENST00000592909 IQSEC2Q5JU85 1478 aa16.95■□□□□ 0.3
SMCO4P1-201ENST00000592909 SPATA31D1Q6ZQQ2 1576 aa16.94■□□□□ 0.3
SMCO4P1-201ENST00000592909 MLH3Q9UHC1 1453 aa16.94■□□□□ 0.3
SMCO4P1-201ENST00000592909 ESF1Q9H501 851 aaKnown RBP16.94■□□□□ 0.3
SMCO4P1-201ENST00000592909 LTBP4Q8N2S1 1624 aa16.94■□□□□ 0.3
SMCO4P1-201ENST00000592909 TROQ12816 1431 aaPredicted RBP16.94■□□□□ 0.3
SMCO4P1-201ENST00000592909 MYO5CQ9NQX4 1742 aa16.93■□□□□ 0.3
SMCO4P1-201ENST00000592909 AGLP35573 1532 aa16.92■□□□□ 0.3
SMCO4P1-201ENST00000592909 ARHGAP5Q13017 1502 aa16.92■□□□□ 0.3
SMCO4P1-201ENST00000592909 DIP2CQ9Y2E4 1556 aa16.92■□□□□ 0.3
SMCO4P1-201ENST00000592909 NCOA1Q15788 1441 aa16.91■□□□□ 0.3
SMCO4P1-201ENST00000592909 KIF14Q15058 1648 aa16.89■□□□□ 0.29
SMCO4P1-201ENST00000592909 CLIP1P30622 1438 aa16.89■□□□□ 0.29
SMCO4P1-201ENST00000592909 CNTLNQ9NXG0 1405 aa16.89■□□□□ 0.29
SMCO4P1-201ENST00000592909 C3P01024 1663 aa16.87■□□□□ 0.29
SMCO4P1-201ENST00000592909 ARHGAP35Q9NRY4 1499 aa16.86■□□□□ 0.29
SMCO4P1-201ENST00000592909 UBTFP17480 764 aaKnown RBP16.86■□□□□ 0.29
SMCO4P1-201ENST00000592909 ABCA6Q8N139 1617 aa16.85■□□□□ 0.29
SMCO4P1-201ENST00000592909 NPATQ14207 1427 aa16.85■□□□□ 0.29
SMCO4P1-201ENST00000592909 ZMYM3Q14202 1370 aa16.82■□□□□ 0.28
SMCO4P1-201ENST00000592909 ABCC1P33527 1531 aa16.81■□□□□ 0.28
SMCO4P1-201ENST00000592909 ZNF335Q9H4Z2 1342 aaPredicted RBP16.81■□□□□ 0.28
SMCO4P1-201ENST00000592909 NCKAP5LQ9HCH0 1330 aa16.81■□□□□ 0.28
SMCO4P1-201ENST00000592909 UBAP1LF5GYI3 381 aa16.81■□□□□ 0.28
SMCO4P1-201ENST00000592909 PKD2Q13563 968 aa16.8■□□□□ 0.28
SMCO4P1-201ENST00000592909 CAMSAP1Q5T5Y3 1602 aa16.8■□□□□ 0.28
SMCO4P1-201ENST00000592909 CDC42BPBQ9Y5S2 1711 aa16.79■□□□□ 0.28
SMCO4P1-201ENST00000592909 EHMT2Q96KQ7 1210 aa16.77■□□□□ 0.28
SMCO4P1-201ENST00000592909 KIDINS220Q9ULH0 1771 aa16.77■□□□□ 0.27
SMCO4P1-201ENST00000592909 PLA2R1Q13018 1463 aa16.75■□□□□ 0.27
SMCO4P1-201ENST00000592909 PREX2Q70Z35 1606 aa16.75■□□□□ 0.27
SMCO4P1-201ENST00000592909 SPAG9O60271 1321 aaKnown RBP16.74■□□□□ 0.27
SMCO4P1-201ENST00000592909 ITSN2Q9NZM3 1697 aa16.74■□□□□ 0.27
SMCO4P1-201ENST00000592909 MROH2AA6NES4 1674 aa16.73■□□□□ 0.27
SMCO4P1-201ENST00000592909 TCOF1Q13428 1488 aaKnown RBP16.73■□□□□ 0.27
SMCO4P1-201ENST00000592909 SAMD9LQ8IVG5 1584 aa16.72■□□□□ 0.27
SMCO4P1-201ENST00000592909 CASKIN1Q8WXD9 1431 aa16.72■□□□□ 0.27
SMCO4P1-201ENST00000592909 CCDC18Q5T9S5 1454 aa16.72■□□□□ 0.27
SMCO4P1-201ENST00000592909 PTPRKQ15262 1439 aa16.71■□□□□ 0.27
SMCO4P1-201ENST00000592909 ZNF777Q9ULD5 760 aaPredicted RBP16.71■□□□□ 0.27
SMCO4P1-201ENST00000592909 HNRNPMP52272 730 aaKnown RBP eCLIP16.7■□□□□ 0.26
SMCO4P1-201ENST00000592909 PPP6R1Q9UPN7 881 aa16.7■□□□□ 0.26
SMCO4P1-201ENST00000592909 LRRIQ1Q96JM4 1722 aa16.7■□□□□ 0.26
SMCO4P1-201ENST00000592909 KIAA1107Q9UPP5 1409 aa16.68■□□□□ 0.26
SMCO4P1-201ENST00000592909 GPATCH8Q9UKJ3 1502 aaKnown RBP16.67■□□□□ 0.26
SMCO4P1-201ENST00000592909 HSPA1LP34931 641 aa16.67■□□□□ 0.26
SMCO4P1-201ENST00000592909 GGT6Q6P531 493 aa16.67■□□□□ 0.26
SMCO4P1-201ENST00000592909 CEP170BQ9Y4F5 1589 aaPredicted RBP16.67■□□□□ 0.26
SMCO4P1-201ENST00000592909 A2MP01023 1474 aa16.67■□□□□ 0.26
SMCO4P1-201ENST00000592909 ZNF142P52746 1687 aaPredicted RBP16.65■□□□□ 0.26
SMCO4P1-201ENST00000592909 SYCP2Q9BX26 1530 aa16.65■□□□□ 0.26
SMCO4P1-201ENST00000592909 TOM1O60784 492 aa16.65■□□□□ 0.26
SMCO4P1-201ENST00000592909 MYO3AQ8NEV4 1616 aa16.65■□□□□ 0.26
SMCO4P1-201ENST00000592909 CDC42BPAQ5VT25 1732 aa16.65■□□□□ 0.26
SMCO4P1-201ENST00000592909 PLXNC1O60486 1568 aa16.64■□□□□ 0.25
SMCO4P1-201ENST00000592909 CFDP1Q9UEE9 299 aaPredicted RBP16.64■□□□□ 0.25
SMCO4P1-201ENST00000592909 ATP7AQ04656 1500 aa16.64■□□□□ 0.25
SMCO4P1-201ENST00000592909 PLEKHH2Q8IVE3 1493 aa16.63■□□□□ 0.25
SMCO4P1-201ENST00000592909 A2ML1A8K2U0 1454 aa16.62■□□□□ 0.25
SMCO4P1-201ENST00000592909 CLTCQ00610 1675 aaKnown RBP16.62■□□□□ 0.25
SMCO4P1-201ENST00000592909 SUPT6HQ7KZ85 1726 aaKnown RBP16.62■□□□□ 0.25
SMCO4P1-201ENST00000592909 PIP4K2BP78356 416 aa16.61■□□□□ 0.25
SMCO4P1-201ENST00000592909 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
SMCO4P1-201ENST00000592909 FYCO1Q9BQS8 1478 aa16.6■□□□□ 0.25
SMCO4P1-201ENST00000592909 CPS1P31327 1500 aa16.6■□□□□ 0.25
SMCO4P1-201ENST00000592909 MED1Q15648 1581 aaPredicted RBP16.6■□□□□ 0.25
SMCO4P1-201ENST00000592909 INO80Q9ULG1 1556 aaPredicted RBP16.6■□□□□ 0.25
SMCO4P1-201ENST00000592909 CCNB3Q8WWL7 1395 aa16.58■□□□□ 0.24
SMCO4P1-201ENST00000592909 DNMT1P26358 1616 aaKnown RBP16.57■□□□□ 0.24
SMCO4P1-201ENST00000592909 SHANK2Q9UPX8 1470 aa16.57■□□□□ 0.24
SMCO4P1-201ENST00000592909 DHX29Q7Z478 1369 aaKnown RBP16.55■□□□□ 0.24
SMCO4P1-201ENST00000592909 TNRQ92752 1358 aa16.55■□□□□ 0.24
SMCO4P1-201ENST00000592909 FBXO31Q5XUX0 539 aaPredicted RBP16.55■□□□□ 0.24
SMCO4P1-201ENST00000592909 ANKLE2Q86XL3 938 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms