RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 STRCQ7RTU9 1775 aa9.68□□□□□ -0.86
ERCC1-216ENST00000592444 RUSC2Q8N2Y8 1516 aa9.67□□□□□ -0.86
ERCC1-216ENST00000592444 HSPA1LP34931 641 aa9.67□□□□□ -0.86
ERCC1-216ENST00000592444 CLEC11AQ9Y240 323 aa9.65□□□□□ -0.86
ERCC1-216ENST00000592444 SPDYE1Q8NFV5 336 aaPredicted RBP9.64□□□□□ -0.87
ERCC1-216ENST00000592444 PRKAR2AP13861 404 aaKnown RBP9.63□□□□□ -0.87
ERCC1-216ENST00000592444 MAGI3Q5TCQ9 1506 aa9.62□□□□□ -0.87
ERCC1-216ENST00000592444 PTPRTO14522 1441 aa9.62□□□□□ -0.87
ERCC1-216ENST00000592444 CD109Q6YHK3 1445 aa9.62□□□□□ -0.87
ERCC1-216ENST00000592444 EVX2Q03828 476 aa9.61□□□□□ -0.87
ERCC1-216ENST00000592444 MKRN4PQ13434 485 aaPredicted RBP9.6□□□□□ -0.87
ERCC1-216ENST00000592444 CFAP43Q8NDM7 1665 aa9.6□□□□□ -0.87
ERCC1-216ENST00000592444 RGS17Q9UGC6 210 aaPredicted RBP9.59□□□□□ -0.87
ERCC1-216ENST00000592444 UHRF1BP1LA0JNW5 1464 aa9.59□□□□□ -0.87
ERCC1-216ENST00000592444 ARAP3Q8WWN8 1544 aa9.58□□□□□ -0.88
ERCC1-216ENST00000592444 PIP4K2BP78356 416 aa9.58□□□□□ -0.88
ERCC1-216ENST00000592444 ZNF692Q9BU19 519 aaPredicted RBP9.58□□□□□ -0.88
ERCC1-216ENST00000592444 RAPGEF3O95398 923 aa9.57□□□□□ -0.88
ERCC1-216ENST00000592444 CSRNP3Q8WYN3 585 aa9.57□□□□□ -0.88
ERCC1-216ENST00000592444 ERICH3Q5RHP9 1530 aa9.56□□□□□ -0.88
ERCC1-216ENST00000592444 PREX1Q8TCU6 1659 aa9.56□□□□□ -0.88
ERCC1-216ENST00000592444 KDM5BQ9UGL1 1544 aa9.56□□□□□ -0.88
ERCC1-216ENST00000592444 TNIKQ9UKE5 1360 aa9.55□□□□□ -0.88
ERCC1-216ENST00000592444 KCNH8Q96L42 1107 aa9.55□□□□□ -0.88
ERCC1-216ENST00000592444 UACAQ9BZF9 1416 aa9.55□□□□□ -0.88
ERCC1-216ENST00000592444 WDR7Q9Y4E6 1490 aa9.54□□□□□ -0.88
ERCC1-216ENST00000592444 ZCCHC11Q5TAX3 1644 aaKnown RBP9.54□□□□□ -0.88
ERCC1-216ENST00000592444 C19orf67A6NJJ6 358 aa9.52□□□□□ -0.89
ERCC1-216ENST00000592444 CEBPAP49715 358 aaPredicted RBP9.51□□□□□ -0.89
ERCC1-216ENST00000592444 MLECQ14165 292 aa9.51□□□□□ -0.89
ERCC1-216ENST00000592444 SSUH2Q9Y2M2 353 aa9.51□□□□□ -0.89
ERCC1-216ENST00000592444 ZNF335Q9H4Z2 1342 aaPredicted RBP9.51□□□□□ -0.89
ERCC1-216ENST00000592444 POTEAQ6S8J7 498 aa9.5□□□□□ -0.89
ERCC1-216ENST00000592444 WRNQ14191 1432 aaPredicted RBP eCLIP9.49□□□□□ -0.89
ERCC1-216ENST00000592444 UHRF1BP1Q6BDS2 1440 aa9.49□□□□□ -0.89
ERCC1-216ENST00000592444 POGZQ7Z3K3 1410 aa9.48□□□□□ -0.89
ERCC1-216ENST00000592444 IFFO2Q5TF58 517 aa9.48□□□□□ -0.89
ERCC1-216ENST00000592444 TTC37Q6PGP7 1564 aa9.48□□□□□ -0.89
ERCC1-216ENST00000592444 CARMIL2Q6F5E8 1435 aa9.48□□□□□ -0.89
ERCC1-216ENST00000592444 SETD1AO15047 1707 aaKnown RBP9.47□□□□□ -0.89
ERCC1-216ENST00000592444 FER1L4A9Z1Z3 1794 aa9.46□□□□□ -0.9
ERCC1-216ENST00000592444 TOM1O60784 492 aa9.46□□□□□ -0.9
ERCC1-216ENST00000592444 UPF1Q92900 1129 aaKnown RBP eCLIP9.46□□□□□ -0.9
ERCC1-216ENST00000592444 GABBR2O75899 941 aa9.45□□□□□ -0.9
ERCC1-216ENST00000592444 PRR29P0C7W0 189 aa9.45□□□□□ -0.9
ERCC1-216ENST00000592444 FANCAO15360 1455 aa9.45□□□□□ -0.9
ERCC1-216ENST00000592444 PHLDB1Q86UU1 1377 aa9.44□□□□□ -0.9
ERCC1-216ENST00000592444 FRMPD1Q5SYB0 1578 aa9.43□□□□□ -0.9
ERCC1-216ENST00000592444 ARHGEF40Q8TER5 1519 aa9.43□□□□□ -0.9
ERCC1-216ENST00000592444 CHADLQ6NUI6 762 aa9.43□□□□□ -0.9
ERCC1-216ENST00000592444 EHMT2Q96KQ7 1210 aa9.42□□□□□ -0.9
ERCC1-216ENST00000592444 SIGLEC1Q9BZZ2 1709 aa9.42□□□□□ -0.9
ERCC1-216ENST00000592444 NCOA1Q15788 1441 aa9.41□□□□□ -0.9
ERCC1-216ENST00000592444 LHX8Q68G74 356 aa9.4□□□□□ -0.9
ERCC1-216ENST00000592444 SETD1BQ9UPS6 1966 aaKnown RBP9.39□□□□□ -0.91
ERCC1-216ENST00000592444 AKNAQ7Z591 1439 aa9.39□□□□□ -0.91
ERCC1-216ENST00000592444 NCKAP5LQ9HCH0 1330 aa9.38□□□□□ -0.91
ERCC1-216ENST00000592444 KIAA0556O60303 1618 aa9.36□□□□□ -0.91
ERCC1-216ENST00000592444 ARHGEF12Q9NZN5 1544 aa9.36□□□□□ -0.91
ERCC1-216ENST00000592444 NEO1Q92859 1461 aa9.35□□□□□ -0.91
ERCC1-216ENST00000592444 DISP1Q96F81 1524 aa9.35□□□□□ -0.91
ERCC1-216ENST00000592444 CAMSAP1Q5T5Y3 1602 aa9.33□□□□□ -0.92
ERCC1-216ENST00000592444 CD44P16070 742 aaKnown RBP9.32□□□□□ -0.92
ERCC1-216ENST00000592444 ALKQ9UM73 1620 aa9.31□□□□□ -0.92
ERCC1-216ENST00000592444 DENND4BO75064 1496 aaPredicted RBP9.3□□□□□ -0.92
ERCC1-216ENST00000592444 CLCN6P51797 869 aa9.3□□□□□ -0.92
ERCC1-216ENST00000592444 RICTORQ6R327 1708 aa9.3□□□□□ -0.92
ERCC1-216ENST00000592444 ZFYVE16Q7Z3T8 1539 aa9.3□□□□□ -0.92
ERCC1-216ENST00000592444 PTPRKQ15262 1439 aa9.3□□□□□ -0.92
ERCC1-216ENST00000592444 FHOD3Q2V2M9 1422 aa9.29□□□□□ -0.92
ERCC1-216ENST00000592444 IQGAP2Q13576 1575 aa9.29□□□□□ -0.92
ERCC1-216ENST00000592444 RBM33Q96EV2 1170 aaKnown RBP9.28□□□□□ -0.92
ERCC1-216ENST00000592444 FARP1Q9Y4F1 1045 aaPredicted RBP9.28□□□□□ -0.92
ERCC1-216ENST00000592444 ABCA9Q8IUA7 1624 aa9.27□□□□□ -0.92
ERCC1-216ENST00000592444 EFCAB5A4FU69 1503 aa9.27□□□□□ -0.93
ERCC1-216ENST00000592444 TRIM52Q96A61 297 aa9.27□□□□□ -0.93
ERCC1-216ENST00000592444 TRAPPC8Q9Y2L5 1435 aa9.27□□□□□ -0.93
ERCC1-216ENST00000592444 BIVM-ERCC5R4GMW8 1640 aa9.27□□□□□ -0.93
ERCC1-216ENST00000592444 PKD2Q13563 968 aa9.26□□□□□ -0.93
ERCC1-216ENST00000592444 CPS1P31327 1500 aa9.26□□□□□ -0.93
ERCC1-216ENST00000592444 IGF1RP08069 1367 aa9.25□□□□□ -0.93
ERCC1-216ENST00000592444 C3P01024 1663 aa9.25□□□□□ -0.93
ERCC1-216ENST00000592444 ARID3CA6NKF2 412 aa9.24□□□□□ -0.93
ERCC1-216ENST00000592444 ZMYM4Q5VZL5 1548 aa9.24□□□□□ -0.93
ERCC1-216ENST00000592444 MAGI2Q86UL8 1455 aa9.23□□□□□ -0.93
ERCC1-216ENST00000592444 SETBP1Q9Y6X0 1596 aa9.22□□□□□ -0.93
ERCC1-216ENST00000592444 DCBLD2Q96PD2 775 aa9.22□□□□□ -0.93
ERCC1-216ENST00000592444 ZRANB1Q9UGI0 708 aa9.22□□□□□ -0.93
ERCC1-216ENST00000592444 ATP10AO60312 1499 aa9.21□□□□□ -0.93
ERCC1-216ENST00000592444 SHANK2Q9UPX8 1470 aa9.21□□□□□ -0.93
ERCC1-216ENST00000592444 HECW1Q76N89 1606 aa9.2□□□□□ -0.94
ERCC1-216ENST00000592444 C9orf84Q5VXU9 1444 aa9.2□□□□□ -0.94
ERCC1-216ENST00000592444 TCOF1Q13428 1488 aaKnown RBP9.2□□□□□ -0.94
ERCC1-216ENST00000592444 ABCA8O94911 1581 aa9.2□□□□□ -0.94
ERCC1-216ENST00000592444 ESF1Q9H501 851 aaKnown RBP9.19□□□□□ -0.94
ERCC1-216ENST00000592444 PLA2R1Q13018 1463 aa9.19□□□□□ -0.94
ERCC1-216ENST00000592444 RAPGEF2Q9Y4G8 1499 aa9.19□□□□□ -0.94
ERCC1-216ENST00000592444 UGGT2Q9NYU1 1516 aa9.19□□□□□ -0.94
ERCC1-216ENST00000592444 POTEIP0CG38 1075 aa9.18□□□□□ -0.94
ERCC1-216ENST00000592444 LRRC7Q96NW7 1537 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms