RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 YEATS2Q9ULM3 1422 aa17.3■□□□□ 0.36
SDF2-209ENST00000591903 ARHGEF12Q9NZN5 1544 aa17.3■□□□□ 0.36
SDF2-209ENST00000591903 SETD1BQ9UPS6 1966 aaKnown RBP17.29■□□□□ 0.36
SDF2-209ENST00000591903 SPATA31D1Q6ZQQ2 1576 aa17.29■□□□□ 0.36
SDF2-209ENST00000591903 STRCQ7RTU9 1775 aa17.29■□□□□ 0.36
SDF2-209ENST00000591903 MLECQ14165 292 aa17.26■□□□□ 0.35
SDF2-209ENST00000591903 ATP10AO60312 1499 aa17.24■□□□□ 0.35
SDF2-209ENST00000591903 C9orf84Q5VXU9 1444 aa17.24■□□□□ 0.35
SDF2-209ENST00000591903 UHRF1BP1Q6BDS2 1440 aa17.22■□□□□ 0.35
SDF2-209ENST00000591903 SCAPERQ9BY12 1400 aa17.21■□□□□ 0.35
SDF2-209ENST00000591903 MYO5CQ9NQX4 1742 aa17.2■□□□□ 0.34
SDF2-209ENST00000591903 PTPRTO14522 1441 aa17.2■□□□□ 0.34
SDF2-209ENST00000591903 PLCH2O75038 1416 aa17.2■□□□□ 0.34
SDF2-209ENST00000591903 IQSEC2Q5JU85 1478 aa17.19■□□□□ 0.34
SDF2-209ENST00000591903 CSRNP3Q8WYN3 585 aa17.17■□□□□ 0.34
SDF2-209ENST00000591903 CEBPAP49715 358 aaPredicted RBP17.15■□□□□ 0.34
SDF2-209ENST00000591903 ZNF518AQ6AHZ1 1483 aa17.15■□□□□ 0.34
SDF2-209ENST00000591903 REREQ9P2R6 1566 aa17.14■□□□□ 0.33
SDF2-209ENST00000591903 C3P01024 1663 aa17.13■□□□□ 0.33
SDF2-209ENST00000591903 KDM5CP41229 1560 aa17.13■□□□□ 0.33
SDF2-209ENST00000591903 LTBP4Q8N2S1 1624 aa17.12■□□□□ 0.33
SDF2-209ENST00000591903 EFCAB2Q5VUJ9 269 aa17.12■□□□□ 0.33
SDF2-209ENST00000591903 CDK13Q14004 1512 aaKnown RBP17.11■□□□□ 0.33
SDF2-209ENST00000591903 RANGAP1P46060 587 aaPredicted RBP17.1■□□□□ 0.33
SDF2-209ENST00000591903 EEA1Q15075 1411 aa17.09■□□□□ 0.33
SDF2-209ENST00000591903 DIP2CQ9Y2E4 1556 aa17.08■□□□□ 0.32
SDF2-209ENST00000591903 KIF14Q15058 1648 aa17.07■□□□□ 0.32
SDF2-209ENST00000591903 TRAPPC8Q9Y2L5 1435 aa17.06■□□□□ 0.32
SDF2-209ENST00000591903 AGLP35573 1532 aa17.06■□□□□ 0.32
SDF2-209ENST00000591903 NCOA1Q15788 1441 aa17.05■□□□□ 0.32
SDF2-209ENST00000591903 ESF1Q9H501 851 aaKnown RBP17.05■□□□□ 0.32
SDF2-209ENST00000591903 CDK11AQ9UQ88 783 aaPredicted RBP17.05■□□□□ 0.32
SDF2-209ENST00000591903 ARHGAP5Q13017 1502 aa17.05■□□□□ 0.32
SDF2-209ENST00000591903 ABCA6Q8N139 1617 aa17.04■□□□□ 0.32
SDF2-209ENST00000591903 CNTLNQ9NXG0 1405 aa17.04■□□□□ 0.32
SDF2-209ENST00000591903 MYT1LQ9UL68 1186 aa17.03■□□□□ 0.32
SDF2-209ENST00000591903 MLH3Q9UHC1 1453 aa17.03■□□□□ 0.32
SDF2-209ENST00000591903 MROH2AA6NES4 1674 aa17.01■□□□□ 0.31
SDF2-209ENST00000591903 AFAP1Q8N556 730 aa17.01■□□□□ 0.31
SDF2-209ENST00000591903 FMN1Q68DA7 1419 aa17.01■□□□□ 0.31
SDF2-209ENST00000591903 CAMSAP1Q5T5Y3 1602 aa16.99■□□□□ 0.31
SDF2-209ENST00000591903 CDC42BPBQ9Y5S2 1711 aa16.99■□□□□ 0.31
SDF2-209ENST00000591903 CLIP1P30622 1438 aa16.99■□□□□ 0.31
SDF2-209ENST00000591903 TROQ12816 1431 aaPredicted RBP16.98■□□□□ 0.31
SDF2-209ENST00000591903 NPATQ14207 1427 aa16.98■□□□□ 0.31
SDF2-209ENST00000591903 ITSN2Q9NZM3 1697 aa16.97■□□□□ 0.31
SDF2-209ENST00000591903 SUPT6HQ7KZ85 1726 aaKnown RBP16.96■□□□□ 0.31
SDF2-209ENST00000591903 PREX2Q70Z35 1606 aa16.96■□□□□ 0.3
SDF2-209ENST00000591903 ABCC1P33527 1531 aa16.96■□□□□ 0.3
SDF2-209ENST00000591903 KIDINS220Q9ULH0 1771 aa16.94■□□□□ 0.3
SDF2-209ENST00000591903 ZNF142P52746 1687 aaPredicted RBP16.94■□□□□ 0.3
SDF2-209ENST00000591903 UBAP1LF5GYI3 381 aa16.94■□□□□ 0.3
SDF2-209ENST00000591903 ATP1B4Q9UN42 357 aaPredicted RBP16.94■□□□□ 0.3
SDF2-209ENST00000591903 PLA2R1Q13018 1463 aa16.92■□□□□ 0.3
SDF2-209ENST00000591903 PKD2Q13563 968 aa16.91■□□□□ 0.3
SDF2-209ENST00000591903 LRRIQ1Q96JM4 1722 aa16.9■□□□□ 0.3
SDF2-209ENST00000591903 MYO3AQ8NEV4 1616 aa16.9■□□□□ 0.3
SDF2-209ENST00000591903 ZNF335Q9H4Z2 1342 aaPredicted RBP16.9■□□□□ 0.3
SDF2-209ENST00000591903 ZMYM3Q14202 1370 aa16.88■□□□□ 0.29
SDF2-209ENST00000591903 CEP170BQ9Y4F5 1589 aaPredicted RBP16.87■□□□□ 0.29
SDF2-209ENST00000591903 NCKAP5LQ9HCH0 1330 aa16.87■□□□□ 0.29
SDF2-209ENST00000591903 CDC42BPAQ5VT25 1732 aa16.87■□□□□ 0.29
SDF2-209ENST00000591903 TCOF1Q13428 1488 aaKnown RBP16.86■□□□□ 0.29
SDF2-209ENST00000591903 ARHGAP35Q9NRY4 1499 aa16.86■□□□□ 0.29
SDF2-209ENST00000591903 MED1Q15648 1581 aaPredicted RBP16.86■□□□□ 0.29
SDF2-209ENST00000591903 CLTCQ00610 1675 aaKnown RBP16.86■□□□□ 0.29
SDF2-209ENST00000591903 SAMD9LQ8IVG5 1584 aa16.85■□□□□ 0.29
SDF2-209ENST00000591903 CHIC1Q5VXU3 224 aa16.83■□□□□ 0.28
SDF2-209ENST00000591903 CCDC18Q5T9S5 1454 aa16.82■□□□□ 0.28
SDF2-209ENST00000591903 PPP6R1Q9UPN7 881 aa16.81■□□□□ 0.28
SDF2-209ENST00000591903 POLR1AO95602 1720 aaPredicted RBP16.8■□□□□ 0.28
SDF2-209ENST00000591903 PLXNC1O60486 1568 aa16.8■□□□□ 0.28
SDF2-209ENST00000591903 CPS1P31327 1500 aa16.8■□□□□ 0.28
SDF2-209ENST00000591903 TOM1O60784 492 aa16.79■□□□□ 0.28
SDF2-209ENST00000591903 UBTFP17480 764 aaKnown RBP16.79■□□□□ 0.28
SDF2-209ENST00000591903 PTPRKQ15262 1439 aa16.79■□□□□ 0.28
SDF2-209ENST00000591903 ATP7AQ04656 1500 aa16.78■□□□□ 0.28
SDF2-209ENST00000591903 SPAG9O60271 1321 aaKnown RBP16.77■□□□□ 0.28
SDF2-209ENST00000591903 SYCP2Q9BX26 1530 aa16.77■□□□□ 0.28
SDF2-209ENST00000591903 HSPA1LP34931 641 aa16.77■□□□□ 0.28
SDF2-209ENST00000591903 INO80Q9ULG1 1556 aaPredicted RBP16.77■□□□□ 0.27
SDF2-209ENST00000591903 SCAF1Q9H7N4 1312 aaKnown RBP16.76■□□□□ 0.27
SDF2-209ENST00000591903 DNMT1P26358 1616 aaKnown RBP16.76■□□□□ 0.27
SDF2-209ENST00000591903 ADGBQ8N7X0 1667 aa16.75■□□□□ 0.27
SDF2-209ENST00000591903 A2ML1A8K2U0 1454 aa16.75■□□□□ 0.27
SDF2-209ENST00000591903 A2MP01023 1474 aa16.75■□□□□ 0.27
SDF2-209ENST00000591903 CASKIN1Q8WXD9 1431 aa16.74■□□□□ 0.27
SDF2-209ENST00000591903 PLEKHH2Q8IVE3 1493 aa16.73■□□□□ 0.27
SDF2-209ENST00000591903 PIP4K2BP78356 416 aa16.73■□□□□ 0.27
SDF2-209ENST00000591903 KIAA1107Q9UPP5 1409 aa16.72■□□□□ 0.27
SDF2-209ENST00000591903 PHF23Q9BUL5 403 aaPredicted RBP16.72■□□□□ 0.27
SDF2-209ENST00000591903 SHANK2Q9UPX8 1470 aa16.72■□□□□ 0.27
SDF2-209ENST00000591903 NEURL4Q96JN8 1562 aa16.7■□□□□ 0.26
SDF2-209ENST00000591903 ZNF777Q9ULD5 760 aaPredicted RBP16.7■□□□□ 0.26
SDF2-209ENST00000591903 GGT6Q6P531 493 aa16.69■□□□□ 0.26
SDF2-209ENST00000591903 GPATCH8Q9UKJ3 1502 aaKnown RBP16.69■□□□□ 0.26
SDF2-209ENST00000591903 FYCO1Q9BQS8 1478 aa16.67■□□□□ 0.26
SDF2-209ENST00000591903 HNRNPMP52272 730 aaKnown RBP eCLIP16.67■□□□□ 0.26
SDF2-209ENST00000591903 FAM135AQ9P2D6 1515 aa16.66■□□□□ 0.26
SDF2-209ENST00000591903 EHMT2Q96KQ7 1210 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms