RNA–Protein interactions for RNA: ENST00000591662.1

CNTNAP1-204, Transcript of contactin associated protein 1, humanhuman

TSL 1 (best)

Gene CNTNAP1, Length 4,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-204ENST00000591662 PTMSP20962 102 aa14.13□□□□□ -0.15
CNTNAP1-204ENST00000591662 PAK3O75914 559 aaPredicted RBP14.12□□□□□ -0.15
CNTNAP1-204ENST00000591662 HSP90AA2PQ14568 343 aaPredicted RBP14.12□□□□□ -0.15
CNTNAP1-204ENST00000591662 CCDC18Q5T9S5 1454 aa14.12□□□□□ -0.15
CNTNAP1-204ENST00000591662 PHLDB1Q86UU1 1377 aa14.11□□□□□ -0.15
CNTNAP1-204ENST00000591662 FAM161AQ3B820 660 aa14.1□□□□□ -0.15
CNTNAP1-204ENST00000591662 NLRP13Q86W25 1043 aa14.1□□□□□ -0.15
CNTNAP1-204ENST00000591662 CENPQQ7L2Z9 268 aaPredicted RBP14.1□□□□□ -0.15
CNTNAP1-204ENST00000591662 ERICH3Q5RHP9 1530 aa14.09□□□□□ -0.15
CNTNAP1-204ENST00000591662 UACAQ9BZF9 1416 aa14.09□□□□□ -0.15
CNTNAP1-204ENST00000591662 MSNP26038 577 aaKnown RBP14.09□□□□□ -0.15
CNTNAP1-204ENST00000591662 HSCBQ8IWL3 235 aa14.09□□□□□ -0.15
CNTNAP1-204ENST00000591662 SENP3Q9H4L4 574 aaPredicted RBP14.09□□□□□ -0.15
CNTNAP1-204ENST00000591662 KIF15Q9NS87 1388 aa14.08□□□□□ -0.15
CNTNAP1-204ENST00000591662 IL27Q8NEV9 243 aa14.08□□□□□ -0.16
CNTNAP1-204ENST00000591662 ERCC6Q03468 1493 aa14.08□□□□□ -0.16
CNTNAP1-204ENST00000591662 EXOC6Q8TAG9 804 aa14.08□□□□□ -0.16
CNTNAP1-204ENST00000591662 CCDC7Q96M83 1385 aa14.07□□□□□ -0.16
CNTNAP1-204ENST00000591662 MYBBP1AQ9BQG0 1328 aaKnown RBP14.07□□□□□ -0.16
CNTNAP1-204ENST00000591662 NCLP19338 710 aaKnown RBP14.07□□□□□ -0.16
CNTNAP1-204ENST00000591662 TDRD9Q8NDG6 1382 aaKnown RBP14.06□□□□□ -0.16
CNTNAP1-204ENST00000591662 NFKBIBQ15653 356 aa14.06□□□□□ -0.16
CNTNAP1-204ENST00000591662 CADPSQ9ULU8 1353 aa14.05□□□□□ -0.16
CNTNAP1-204ENST00000591662 MYH16Q9H6N6 1097 aa14.05□□□□□ -0.16
CNTNAP1-204ENST00000591662 CC2D1BQ5T0F9 858 aaKnown RBP14.05□□□□□ -0.16
CNTNAP1-204ENST00000591662 SLKQ9H2G2 1235 aaPredicted RBP14.05□□□□□ -0.16
CNTNAP1-204ENST00000591662 TMF1P82094 1093 aa14.04□□□□□ -0.16
CNTNAP1-204ENST00000591662 GBP4Q96PP9 640 aa14.04□□□□□ -0.16
CNTNAP1-204ENST00000591662 WASHC2AQ641Q2 1341 aa14.04□□□□□ -0.16
CNTNAP1-204ENST00000591662 WDR97A6NE52 1622 aa14.04□□□□□ -0.16
CNTNAP1-204ENST00000591662 PTMAP06454 111 aaKnown RBP14.04□□□□□ -0.16
CNTNAP1-204ENST00000591662 HSP90AB1P08238 724 aaKnown RBP14.04□□□□□ -0.16
CNTNAP1-204ENST00000591662 FTSJ3Q8IY81 847 aaKnown RBP14.04□□□□□ -0.16
CNTNAP1-204ENST00000591662 VSIG10Q8N0Z9 540 aa14.03□□□□□ -0.16
CNTNAP1-204ENST00000591662 FAM43AQ8N2R8 423 aa14.03□□□□□ -0.16
CNTNAP1-204ENST00000591662 LRRC9Q6ZRR7 1453 aa14.03□□□□□ -0.16
CNTNAP1-204ENST00000591662 SMG6Q86US8 1419 aaKnown RBP14.02□□□□□ -0.16
CNTNAP1-204ENST00000591662 DNTTIP2Q5QJE6 756 aaKnown RBP14.02□□□□□ -0.17
CNTNAP1-204ENST00000591662 CFAP53Q96M91 514 aa14□□□□□ -0.17
CNTNAP1-204ENST00000591662 ARAP1Q96P48 1450 aa14□□□□□ -0.17
CNTNAP1-204ENST00000591662 FRAT1Q92837 279 aaPredicted RBP14□□□□□ -0.17
CNTNAP1-204ENST00000591662 CHMP4BQ9H444 224 aaKnown RBP14□□□□□ -0.17
CNTNAP1-204ENST00000591662 MAPK8IP3Q9UPT6 1336 aa14□□□□□ -0.17
CNTNAP1-204ENST00000591662 FOXD1Q16676 465 aa14□□□□□ -0.17
CNTNAP1-204ENST00000591662 DCAF11Q8TEB1 546 aa14□□□□□ -0.17
CNTNAP1-204ENST00000591662 PMFBP1Q8TBY8 1022 aa13.99□□□□□ -0.17
CNTNAP1-204ENST00000591662 EIF4G1Q04637 1599 aaKnown RBP13.99□□□□□ -0.17
CNTNAP1-204ENST00000591662 GOLGA2Q08379 1002 aa13.99□□□□□ -0.17
CNTNAP1-204ENST00000591662 BACH2Q9BYV9 841 aa13.99□□□□□ -0.17
CNTNAP1-204ENST00000591662 C14orf37Q86TY3 774 aa13.98□□□□□ -0.17
CNTNAP1-204ENST00000591662 SLC4A3P48751 1232 aa13.98□□□□□ -0.17
CNTNAP1-204ENST00000591662 GZF1Q9H116 711 aaPredicted RBP13.98□□□□□ -0.17
CNTNAP1-204ENST00000591662 BRPF3Q9ULD4 1205 aa13.98□□□□□ -0.17
CNTNAP1-204ENST00000591662 DDX11L8A8MPP1 907 aa13.98□□□□□ -0.17
CNTNAP1-204ENST00000591662 RWDD1Q9H446 243 aaPredicted RBP13.97□□□□□ -0.17
CNTNAP1-204ENST00000591662 FGD6Q6ZV73 1430 aa13.97□□□□□ -0.17
CNTNAP1-204ENST00000591662 CFAP44Q96MT7 982 aa13.97□□□□□ -0.17
CNTNAP1-204ENST00000591662 KIF7Q2M1P5 1343 aa13.97□□□□□ -0.17
CNTNAP1-204ENST00000591662 FHOD3Q2V2M9 1422 aa13.96□□□□□ -0.17
CNTNAP1-204ENST00000591662 PKD2Q13563 968 aa13.96□□□□□ -0.17
CNTNAP1-204ENST00000591662 PLEKHG5O94827 1062 aa13.96□□□□□ -0.17
CNTNAP1-204ENST00000591662 CRBNQ96SW2 442 aa13.96□□□□□ -0.17
CNTNAP1-204ENST00000591662 CASC1Q6TDU7 716 aa13.95□□□□□ -0.18
CNTNAP1-204ENST00000591662 PRXQ9BXM0 1461 aa13.94□□□□□ -0.18
CNTNAP1-204ENST00000591662 USP47Q96K76 1375 aa13.94□□□□□ -0.18
CNTNAP1-204ENST00000591662 UBE2Q2Q8WVN8 375 aa13.94□□□□□ -0.18
CNTNAP1-204ENST00000591662 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.93□□□□□ -0.18
CNTNAP1-204ENST00000591662 BRD4O60885 1362 aaPredicted RBP13.93□□□□□ -0.18
CNTNAP1-204ENST00000591662 SYNJ1O43426 1573 aa13.93□□□□□ -0.18
CNTNAP1-204ENST00000591662 PKNOX2Q96KN3 472 aa13.93□□□□□ -0.18
CNTNAP1-204ENST00000591662 ZBTB7CA1YPR0 619 aa13.92□□□□□ -0.18
CNTNAP1-204ENST00000591662 SPRYD3Q8NCJ5 442 aa13.92□□□□□ -0.18
CNTNAP1-204ENST00000591662 AKNAQ7Z591 1439 aa13.92□□□□□ -0.18
CNTNAP1-204ENST00000591662 CUX1P39880 1505 aa13.92□□□□□ -0.18
CNTNAP1-204ENST00000591662 SKOR2Q2VWA4 1001 aaPredicted RBP13.92□□□□□ -0.18
CNTNAP1-204ENST00000591662 PDS5BQ9NTI5 1447 aa13.91□□□□□ -0.18
CNTNAP1-204ENST00000591662 A0A0G2JS52 829 aa13.91□□□□□ -0.18
CNTNAP1-204ENST00000591662 CGNL1Q0VF96 1302 aa13.9□□□□□ -0.18
CNTNAP1-204ENST00000591662 PLIN1O60240 522 aa13.9□□□□□ -0.19
CNTNAP1-204ENST00000591662 CHAF1AQ13111 956 aaPredicted RBP13.89□□□□□ -0.19
CNTNAP1-204ENST00000591662 POGKQ9P215 609 aa13.89□□□□□ -0.19
CNTNAP1-204ENST00000591662 TIAM1Q13009 1591 aa13.88□□□□□ -0.19
CNTNAP1-204ENST00000591662 NEUROD2Q15784 382 aa13.88□□□□□ -0.19
CNTNAP1-204ENST00000591662 MYOM3Q5VTT5 1437 aa13.88□□□□□ -0.19
CNTNAP1-204ENST00000591662 ANKRD30AQ9BXX3 1397 aa13.88□□□□□ -0.19
CNTNAP1-204ENST00000591662 HFM1A2PYH4 1435 aa13.87□□□□□ -0.19
CNTNAP1-204ENST00000591662 EIF3AQ14152 1382 aaKnown RBP13.87□□□□□ -0.19
CNTNAP1-204ENST00000591662 IGF1RP08069 1367 aa13.87□□□□□ -0.19
CNTNAP1-204ENST00000591662 NGEFQ8N5V2 710 aa13.87□□□□□ -0.19
CNTNAP1-204ENST00000591662 FANCD2Q9BXW9 1451 aa13.87□□□□□ -0.19
CNTNAP1-204ENST00000591662 MRE11P49959 708 aa13.87□□□□□ -0.19
CNTNAP1-204ENST00000591662 CDK11BP21127 795 aaKnown RBP13.86□□□□□ -0.19
CNTNAP1-204ENST00000591662 CHMP5Q9NZZ3 219 aa13.86□□□□□ -0.19
CNTNAP1-204ENST00000591662 MAP3K1Q13233 1512 aa13.86□□□□□ -0.19
CNTNAP1-204ENST00000591662 NCAPD3P42695 1498 aa13.86□□□□□ -0.19
CNTNAP1-204ENST00000591662 CENPJQ9HC77 1338 aaPredicted RBP13.85□□□□□ -0.19
CNTNAP1-204ENST00000591662 ST20-MTHFSA0A0A6YYL1 179 aa13.85□□□□□ -0.19
CNTNAP1-204ENST00000591662 C11orf95C9JLR9 678 aaPredicted RBP13.85□□□□□ -0.19
CNTNAP1-204ENST00000591662 FRAT2O75474 233 aaPredicted RBP13.85□□□□□ -0.19
CNTNAP1-204ENST00000591662 CASKIN1Q8WXD9 1431 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms