RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 SCAPERQ9BY12 1400 aa16.57■□□□□ 0.24
RETREG3-211ENST00000591547 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
RETREG3-211ENST00000591547 MAGI2Q86UL8 1455 aa16.54■□□□□ 0.24
RETREG3-211ENST00000591547 ILDR2Q71H61 639 aa16.53■□□□□ 0.24
RETREG3-211ENST00000591547 ARHGEF12Q9NZN5 1544 aa16.53■□□□□ 0.24
RETREG3-211ENST00000591547 PLCH2O75038 1416 aa16.53■□□□□ 0.24
RETREG3-211ENST00000591547 PREX1Q8TCU6 1659 aa16.53■□□□□ 0.24
RETREG3-211ENST00000591547 STRCQ7RTU9 1775 aa16.52■□□□□ 0.24
RETREG3-211ENST00000591547 ATP1B4Q9UN42 357 aaPredicted RBP16.52■□□□□ 0.24
RETREG3-211ENST00000591547 ATP10AO60312 1499 aa16.51■□□□□ 0.23
RETREG3-211ENST00000591547 KIF14Q15058 1648 aa16.49■□□□□ 0.23
RETREG3-211ENST00000591547 MYO5CQ9NQX4 1742 aa16.49■□□□□ 0.23
RETREG3-211ENST00000591547 C9orf84Q5VXU9 1444 aa16.48■□□□□ 0.23
RETREG3-211ENST00000591547 DISP3Q9P2K9 1392 aa16.48■□□□□ 0.23
RETREG3-211ENST00000591547 AFAP1Q8N556 730 aa16.46■□□□□ 0.23
RETREG3-211ENST00000591547 EEA1Q15075 1411 aa16.45■□□□□ 0.22
RETREG3-211ENST00000591547 EFCAB2Q5VUJ9 269 aa16.45■□□□□ 0.22
RETREG3-211ENST00000591547 LRRIQ1Q96JM4 1722 aa16.43■□□□□ 0.22
RETREG3-211ENST00000591547 MYT1LQ9UL68 1186 aa16.43■□□□□ 0.22
RETREG3-211ENST00000591547 DIP2CQ9Y2E4 1556 aa16.42■□□□□ 0.22
RETREG3-211ENST00000591547 ARHGAP5Q13017 1502 aa16.41■□□□□ 0.22
RETREG3-211ENST00000591547 C3P01024 1663 aa16.41■□□□□ 0.22
RETREG3-211ENST00000591547 UHRF1BP1Q6BDS2 1440 aa16.4■□□□□ 0.22
RETREG3-211ENST00000591547 ABCA6Q8N139 1617 aa16.4■□□□□ 0.22
RETREG3-211ENST00000591547 KDM5CP41229 1560 aa16.39■□□□□ 0.21
RETREG3-211ENST00000591547 ZNF518AQ6AHZ1 1483 aa16.39■□□□□ 0.21
RETREG3-211ENST00000591547 ARHGAP35Q9NRY4 1499 aa16.39■□□□□ 0.21
RETREG3-211ENST00000591547 CDC42BPBQ9Y5S2 1711 aa16.39■□□□□ 0.21
RETREG3-211ENST00000591547 UBTFP17480 764 aaKnown RBP16.38■□□□□ 0.21
RETREG3-211ENST00000591547 SOCS7O14512 581 aa16.37■□□□□ 0.21
RETREG3-211ENST00000591547 DMRT2Q9Y5R5 561 aa16.37■□□□□ 0.21
RETREG3-211ENST00000591547 SETD1BQ9UPS6 1966 aaKnown RBP16.36■□□□□ 0.21
RETREG3-211ENST00000591547 TROQ12816 1431 aaPredicted RBP16.36■□□□□ 0.21
RETREG3-211ENST00000591547 FMN1Q68DA7 1419 aa16.35■□□□□ 0.21
RETREG3-211ENST00000591547 TRAPPC8Q9Y2L5 1435 aa16.35■□□□□ 0.21
RETREG3-211ENST00000591547 SPATA31D1Q6ZQQ2 1576 aa16.34■□□□□ 0.21
RETREG3-211ENST00000591547 CDK11AQ9UQ88 783 aaPredicted RBP16.34■□□□□ 0.21
RETREG3-211ENST00000591547 LTBP4Q8N2S1 1624 aa16.34■□□□□ 0.21
RETREG3-211ENST00000591547 PTPRTO14522 1441 aa16.32■□□□□ 0.2
RETREG3-211ENST00000591547 REREQ9P2R6 1566 aa16.32■□□□□ 0.2
RETREG3-211ENST00000591547 ITSN2Q9NZM3 1697 aa16.31■□□□□ 0.2
RETREG3-211ENST00000591547 KIDINS220Q9ULH0 1771 aa16.31■□□□□ 0.2
RETREG3-211ENST00000591547 MLH3Q9UHC1 1453 aa16.3■□□□□ 0.2
RETREG3-211ENST00000591547 PREX2Q70Z35 1606 aa16.3■□□□□ 0.2
RETREG3-211ENST00000591547 ABCC1P33527 1531 aa16.29■□□□□ 0.2
RETREG3-211ENST00000591547 CLIP1P30622 1438 aa16.29■□□□□ 0.2
RETREG3-211ENST00000591547 ESF1Q9H501 851 aaKnown RBP16.29■□□□□ 0.2
RETREG3-211ENST00000591547 AGLP35573 1532 aa16.28■□□□□ 0.2
RETREG3-211ENST00000591547 CDC42BPAQ5VT25 1732 aa16.27■□□□□ 0.19
RETREG3-211ENST00000591547 NCOA1Q15788 1441 aa16.27■□□□□ 0.19
RETREG3-211ENST00000591547 NCKAP5LQ9HCH0 1330 aa16.26■□□□□ 0.19
RETREG3-211ENST00000591547 CAMSAP1Q5T5Y3 1602 aa16.26■□□□□ 0.19
RETREG3-211ENST00000591547 SUPT6HQ7KZ85 1726 aaKnown RBP16.25■□□□□ 0.19
RETREG3-211ENST00000591547 ZNF777Q9ULD5 760 aaPredicted RBP16.24■□□□□ 0.19
RETREG3-211ENST00000591547 ZNF335Q9H4Z2 1342 aaPredicted RBP16.22■□□□□ 0.19
RETREG3-211ENST00000591547 SAMD9LQ8IVG5 1584 aa16.21■□□□□ 0.19
RETREG3-211ENST00000591547 CLTCQ00610 1675 aaKnown RBP16.21■□□□□ 0.19
RETREG3-211ENST00000591547 HNRNPMP52272 730 aaKnown RBP eCLIP16.2■□□□□ 0.18
RETREG3-211ENST00000591547 ZMYM3Q14202 1370 aa16.2■□□□□ 0.18
RETREG3-211ENST00000591547 MROH2AA6NES4 1674 aa16.2■□□□□ 0.18
RETREG3-211ENST00000591547 CNTLNQ9NXG0 1405 aa16.19■□□□□ 0.18
RETREG3-211ENST00000591547 SYCP2Q9BX26 1530 aa16.19■□□□□ 0.18
RETREG3-211ENST00000591547 IQSEC2Q5JU85 1478 aa16.18■□□□□ 0.18
RETREG3-211ENST00000591547 UBAP1LF5GYI3 381 aa16.18■□□□□ 0.18
RETREG3-211ENST00000591547 CASKIN1Q8WXD9 1431 aa16.18■□□□□ 0.18
RETREG3-211ENST00000591547 MYO3AQ8NEV4 1616 aa16.16■□□□□ 0.18
RETREG3-211ENST00000591547 NPATQ14207 1427 aa16.16■□□□□ 0.18
RETREG3-211ENST00000591547 SPAG9O60271 1321 aaKnown RBP16.16■□□□□ 0.18
RETREG3-211ENST00000591547 CCDC18Q5T9S5 1454 aa16.16■□□□□ 0.18
RETREG3-211ENST00000591547 GPATCH8Q9UKJ3 1502 aaKnown RBP16.14■□□□□ 0.17
RETREG3-211ENST00000591547 GGT6Q6P531 493 aa16.13■□□□□ 0.17
RETREG3-211ENST00000591547 ZNF142P52746 1687 aaPredicted RBP16.13■□□□□ 0.17
RETREG3-211ENST00000591547 ATP7AQ04656 1500 aa16.13■□□□□ 0.17
RETREG3-211ENST00000591547 PTPRKQ15262 1439 aa16.12■□□□□ 0.17
RETREG3-211ENST00000591547 CHIC1Q5VXU3 224 aa16.12■□□□□ 0.17
RETREG3-211ENST00000591547 CEP170BQ9Y4F5 1589 aaPredicted RBP16.12■□□□□ 0.17
RETREG3-211ENST00000591547 PLXNC1O60486 1568 aa16.11■□□□□ 0.17
RETREG3-211ENST00000591547 INO80Q9ULG1 1556 aaPredicted RBP16.11■□□□□ 0.17
RETREG3-211ENST00000591547 A2MP01023 1474 aa16.1■□□□□ 0.17
RETREG3-211ENST00000591547 TCOF1Q13428 1488 aaKnown RBP16.1■□□□□ 0.17
RETREG3-211ENST00000591547 PLA2R1Q13018 1463 aa16.08■□□□□ 0.16
RETREG3-211ENST00000591547 PKD2Q13563 968 aa16.07■□□□□ 0.16
RETREG3-211ENST00000591547 CFDP1Q9UEE9 299 aaPredicted RBP16.07■□□□□ 0.16
RETREG3-211ENST00000591547 ZNF644Q9H582 1327 aaPredicted RBP16.07■□□□□ 0.16
RETREG3-211ENST00000591547 SCAF1Q9H7N4 1312 aaKnown RBP16.07■□□□□ 0.16
RETREG3-211ENST00000591547 FYCO1Q9BQS8 1478 aa16.07■□□□□ 0.16
RETREG3-211ENST00000591547 HSPA1LP34931 641 aa16.06■□□□□ 0.16
RETREG3-211ENST00000591547 PIP4K2BP78356 416 aa16.06■□□□□ 0.16
RETREG3-211ENST00000591547 PPP6R1Q9UPN7 881 aa16.06■□□□□ 0.16
RETREG3-211ENST00000591547 DNMT1P26358 1616 aaKnown RBP16.05■□□□□ 0.16
RETREG3-211ENST00000591547 ADGBQ8N7X0 1667 aa16.04■□□□□ 0.16
RETREG3-211ENST00000591547 KIAA1107Q9UPP5 1409 aa16.03■□□□□ 0.16
RETREG3-211ENST00000591547 CCNB3Q8WWL7 1395 aa16.03■□□□□ 0.16
RETREG3-211ENST00000591547 FBXO31Q5XUX0 539 aaPredicted RBP16.03■□□□□ 0.16
RETREG3-211ENST00000591547 MED1Q15648 1581 aaPredicted RBP16.02■□□□□ 0.16
RETREG3-211ENST00000591547 A2ML1A8K2U0 1454 aa16.02■□□□□ 0.15
RETREG3-211ENST00000591547 POLR1AO95602 1720 aaPredicted RBP16.02■□□□□ 0.15
RETREG3-211ENST00000591547 NEURL4Q96JN8 1562 aa16.01■□□□□ 0.15
RETREG3-211ENST00000591547 PLEKHH2Q8IVE3 1493 aa16■□□□□ 0.15
RETREG3-211ENST00000591547 SENP3Q9H4L4 574 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms