RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 RSPH6AQ9H0K4 717 aa20.27■□□□□ 0.84
CIRBP-228ENST00000590347 ZNF608Q9ULD9 1512 aaPredicted RBP20.27■□□□□ 0.84
CIRBP-228ENST00000590347 FHAD1B1AJZ9 1412 aa20.27■□□□□ 0.84
CIRBP-228ENST00000590347 LRRC9Q6ZRR7 1453 aa20.26■□□□□ 0.83
CIRBP-228ENST00000590347 PCF11O94913 1555 aaKnown RBP20.26■□□□□ 0.83
CIRBP-228ENST00000590347 NUDCQ9Y266 331 aa20.25■□□□□ 0.83
CIRBP-228ENST00000590347 ERCC6Q03468 1493 aa20.24■□□□□ 0.83
CIRBP-228ENST00000590347 TIAM1Q13009 1591 aa20.24■□□□□ 0.83
CIRBP-228ENST00000590347 BACH2Q9BYV9 841 aa20.23■□□□□ 0.83
CIRBP-228ENST00000590347 DAXXQ9UER7 740 aaPredicted RBP20.23■□□□□ 0.83
CIRBP-228ENST00000590347 MTUS2Q5JR59 1369 aa20.21■□□□□ 0.83
CIRBP-228ENST00000590347 RRAGDQ9NQL2 400 aaPredicted RBP20.2■□□□□ 0.82
CIRBP-228ENST00000590347 PODXL2Q9NZ53 605 aa20.2■□□□□ 0.82
CIRBP-228ENST00000590347 NAP1L5Q96NT1 182 aaPredicted RBP20.2■□□□□ 0.82
CIRBP-228ENST00000590347 MRC2Q9UBG0 1479 aa20.19■□□□□ 0.82
CIRBP-228ENST00000590347 EIF4G2P78344 907 aaKnown RBP eCLIP20.18■□□□□ 0.82
CIRBP-228ENST00000590347 PLIN1O60240 522 aa20.18■□□□□ 0.82
CIRBP-228ENST00000590347 ABCA5Q8WWZ7 1642 aa20.17■□□□□ 0.82
CIRBP-228ENST00000590347 FOXD1Q16676 465 aa20.17■□□□□ 0.82
CIRBP-228ENST00000590347 CUL7Q14999 1698 aa20.16■□□□□ 0.82
CIRBP-228ENST00000590347 CHIC2Q9UKJ5 165 aa20.16■□□□□ 0.82
CIRBP-228ENST00000590347 GLIPR1L2Q4G1C9 344 aa20.15■□□□□ 0.82
CIRBP-228ENST00000590347 TARBP1Q13395 1621 aaKnown RBP20.14■□□□□ 0.81
CIRBP-228ENST00000590347 TCERG1O14776 1098 aaKnown RBP20.14■□□□□ 0.81
CIRBP-228ENST00000590347 FAM43AQ8N2R8 423 aa20.13■□□□□ 0.81
CIRBP-228ENST00000590347 CHMP7Q8WUX9 453 aaPredicted RBP20.13■□□□□ 0.81
CIRBP-228ENST00000590347 FMN1Q68DA7 1419 aa20.13■□□□□ 0.81
CIRBP-228ENST00000590347 CASKIN1Q8WXD9 1431 aa20.13■□□□□ 0.81
CIRBP-228ENST00000590347 CNTLNQ9NXG0 1405 aa20.12■□□□□ 0.81
CIRBP-228ENST00000590347 POGKQ9P215 609 aa20.11■□□□□ 0.81
CIRBP-228ENST00000590347 A0A0U1RQG5 324 aaPredicted RBP20.1■□□□□ 0.81
CIRBP-228ENST00000590347 SMG6Q86US8 1419 aaKnown RBP20.1■□□□□ 0.81
CIRBP-228ENST00000590347 FYCO1Q9BQS8 1478 aa20.07■□□□□ 0.8
CIRBP-228ENST00000590347 CTTNBP2Q8WZ74 1663 aa20.07■□□□□ 0.8
CIRBP-228ENST00000590347 HSP90AA2PQ14568 343 aaPredicted RBP20.07■□□□□ 0.8
CIRBP-228ENST00000590347 RRP7BPQ9NSQ0 103 aa20.06■□□□□ 0.8
CIRBP-228ENST00000590347 GRIN2BQ13224 1484 aa20.05■□□□□ 0.8
CIRBP-228ENST00000590347 RRP1P56182 461 aaKnown RBP20.05■□□□□ 0.8
CIRBP-228ENST00000590347 EFCAB5A4FU69 1503 aa20.05■□□□□ 0.8
CIRBP-228ENST00000590347 CCDC7Q96M83 1385 aa20.04■□□□□ 0.8
CIRBP-228ENST00000590347 SNAPC4Q5SXM2 1469 aa20.04■□□□□ 0.8
CIRBP-228ENST00000590347 ZNF326Q5BKZ1 582 aaKnown RBP20.03■□□□□ 0.8
CIRBP-228ENST00000590347 RNF123Q5XPI4 1314 aa20.03■□□□□ 0.8
CIRBP-228ENST00000590347 DDRGK1Q96HY6 314 aa20.02■□□□□ 0.8
CIRBP-228ENST00000590347 L3MBTL2Q969R5 705 aa20.01■□□□□ 0.79
CIRBP-228ENST00000590347 KIF7Q2M1P5 1343 aa20.01■□□□□ 0.79
CIRBP-228ENST00000590347 TMC1Q8TDI8 760 aa20■□□□□ 0.79
CIRBP-228ENST00000590347 IFT140Q96RY7 1462 aa19.99■□□□□ 0.79
CIRBP-228ENST00000590347 MAP3K1Q13233 1512 aa19.99■□□□□ 0.79
CIRBP-228ENST00000590347 RGS3P49796 1198 aa19.99■□□□□ 0.79
CIRBP-228ENST00000590347 SLKQ9H2G2 1235 aaPredicted RBP19.98■□□□□ 0.79
CIRBP-228ENST00000590347 RCAN3Q9UKA8 241 aa19.98■□□□□ 0.79
CIRBP-228ENST00000590347 CDCA7LQ96GN5 454 aa19.98■□□□□ 0.79
CIRBP-228ENST00000590347 GZF1Q9H116 711 aaPredicted RBP19.98■□□□□ 0.79
CIRBP-228ENST00000590347 FGD6Q6ZV73 1430 aa19.97■□□□□ 0.79
CIRBP-228ENST00000590347 CDK13Q14004 1512 aaKnown RBP19.97■□□□□ 0.79
CIRBP-228ENST00000590347 PBRM1Q86U86 1689 aa19.96■□□□□ 0.79
CIRBP-228ENST00000590347 HSP90AA1P07900 732 aaKnown RBP19.96■□□□□ 0.79
CIRBP-228ENST00000590347 NCOA2Q15596 1464 aa19.95■□□□□ 0.78
CIRBP-228ENST00000590347 PTPRKQ15262 1439 aa19.95■□□□□ 0.78
CIRBP-228ENST00000590347 CCDC18Q5T9S5 1454 aa19.95■□□□□ 0.78
CIRBP-228ENST00000590347 NBPF8Q3BBV2 869 aa19.95■□□□□ 0.78
CIRBP-228ENST00000590347 CRBNQ96SW2 442 aa19.95■□□□□ 0.78
CIRBP-228ENST00000590347 PNNQ9H307 717 aaKnown RBP19.95■□□□□ 0.78
CIRBP-228ENST00000590347 ADAMTS12P58397 1594 aa19.93■□□□□ 0.78
CIRBP-228ENST00000590347 CFAP43Q8NDM7 1665 aa19.93■□□□□ 0.78
CIRBP-228ENST00000590347 PANK2Q9BZ23 570 aa19.93■□□□□ 0.78
CIRBP-228ENST00000590347 IQGAP2Q13576 1575 aa19.93■□□□□ 0.78
CIRBP-228ENST00000590347 ZNF777Q9ULD5 760 aaPredicted RBP19.93■□□□□ 0.78
CIRBP-228ENST00000590347 ZNF644Q9H582 1327 aaPredicted RBP19.92■□□□□ 0.78
CIRBP-228ENST00000590347 SAMD9Q5K651 1589 aa19.92■□□□□ 0.78
CIRBP-228ENST00000590347 WDR62O43379 1518 aa19.91■□□□□ 0.78
CIRBP-228ENST00000590347 MS4A1P11836 297 aa19.91■□□□□ 0.78
CIRBP-228ENST00000590347 MAGI3Q5TCQ9 1506 aa19.91■□□□□ 0.78
CIRBP-228ENST00000590347 C20orf194Q5TEA3 1177 aa19.91■□□□□ 0.78
CIRBP-228ENST00000590347 SPRYD3Q8NCJ5 442 aa19.9■□□□□ 0.78
CIRBP-228ENST00000590347 JPH4Q96JJ6 628 aa19.89■□□□□ 0.77
CIRBP-228ENST00000590347 ARID3AQ99856 593 aa19.89■□□□□ 0.77
CIRBP-228ENST00000590347 PNISRQ8TF01 805 aaKnown RBP19.88■□□□□ 0.77
CIRBP-228ENST00000590347 EIF4G3O43432 1585 aaKnown RBP19.87■□□□□ 0.77
CIRBP-228ENST00000590347 LRRIQ1Q96JM4 1722 aa19.87■□□□□ 0.77
CIRBP-228ENST00000590347 KDM5BQ9UGL1 1544 aa19.87■□□□□ 0.77
CIRBP-228ENST00000590347 GRIN2AQ12879 1464 aa19.86■□□□□ 0.77
CIRBP-228ENST00000590347 MYOM3Q5VTT5 1437 aa19.86■□□□□ 0.77
CIRBP-228ENST00000590347 EPRSP07814 1512 aaKnown RBP19.85■□□□□ 0.77
CIRBP-228ENST00000590347 NCOA1Q15788 1441 aa19.84■□□□□ 0.77
CIRBP-228ENST00000590347 UACAQ9BZF9 1416 aa19.82■□□□□ 0.76
CIRBP-228ENST00000590347 KIAA0586Q9BVV6 1533 aa19.82■□□□□ 0.76
CIRBP-228ENST00000590347 PLB1Q6P1J6 1458 aa19.8■□□□□ 0.76
CIRBP-228ENST00000590347 DISP1Q96F81 1524 aa19.8■□□□□ 0.76
CIRBP-228ENST00000590347 THOC2Q8NI27 1593 aaKnown RBP19.79■□□□□ 0.76
CIRBP-228ENST00000590347 XRCC6P12956 609 aaKnown RBP eCLIP19.78■□□□□ 0.76
CIRBP-228ENST00000590347 C8orf34Q49A92 452 aa19.78■□□□□ 0.76
CIRBP-228ENST00000590347 RRP9O43818 475 aaKnown RBP19.78■□□□□ 0.76
CIRBP-228ENST00000590347 PRG4Q92954 1404 aaPredicted RBP19.77■□□□□ 0.76
CIRBP-228ENST00000590347 RBM10P98175 930 aaKnown RBP19.76■□□□□ 0.75
CIRBP-228ENST00000590347 FAM161AQ3B820 660 aa19.74■□□□□ 0.75
CIRBP-228ENST00000590347 NAIPQ13075 1403 aa19.73■□□□□ 0.75
CIRBP-228ENST00000590347 DHX29Q7Z478 1369 aaKnown RBP19.73■□□□□ 0.75
CIRBP-228ENST00000590347 EHBP1L1Q8N3D4 1523 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms