RNA–Protein interactions for RNA: ENST00000590118.5

CROCCP3-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 4 BASIC

Gene CROCCP3, Length 574 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-204ENST00000590118 PLCH2O75038 1416 aa23.64■■□□□ 1.37
CROCCP3-204ENST00000590118 ARHGEF12Q9NZN5 1544 aa23.63■■□□□ 1.37
CROCCP3-204ENST00000590118 ATP10AO60312 1499 aa23.62■■□□□ 1.37
CROCCP3-204ENST00000590118 CDK13Q14004 1512 aaKnown RBP23.61■■□□□ 1.37
CROCCP3-204ENST00000590118 EEA1Q15075 1411 aa23.6■■□□□ 1.37
CROCCP3-204ENST00000590118 PREX1Q8TCU6 1659 aa23.6■■□□□ 1.37
CROCCP3-204ENST00000590118 C9orf84Q5VXU9 1444 aa23.59■■□□□ 1.37
CROCCP3-204ENST00000590118 CEBPAP49715 358 aaPredicted RBP23.58■■□□□ 1.37
CROCCP3-204ENST00000590118 SETD1BQ9UPS6 1966 aaKnown RBP23.56■■□□□ 1.36
CROCCP3-204ENST00000590118 EFCAB2Q5VUJ9 269 aa23.55■■□□□ 1.36
CROCCP3-204ENST00000590118 DMRT2Q9Y5R5 561 aa23.55■■□□□ 1.36
CROCCP3-204ENST00000590118 STRCQ7RTU9 1775 aa23.54■■□□□ 1.36
CROCCP3-204ENST00000590118 DISP3Q9P2K9 1392 aa23.53■■□□□ 1.36
CROCCP3-204ENST00000590118 ILDR2Q71H61 639 aa23.53■■□□□ 1.36
CROCCP3-204ENST00000590118 MYO5CQ9NQX4 1742 aa23.51■■□□□ 1.35
CROCCP3-204ENST00000590118 UHRF1BP1Q6BDS2 1440 aa23.48■■□□□ 1.35
CROCCP3-204ENST00000590118 SOCS7O14512 581 aa23.47■■□□□ 1.35
CROCCP3-204ENST00000590118 ZNF518AQ6AHZ1 1483 aa23.47■■□□□ 1.35
CROCCP3-204ENST00000590118 AFAP1Q8N556 730 aa23.46■■□□□ 1.35
CROCCP3-204ENST00000590118 ATP1B4Q9UN42 357 aaPredicted RBP23.46■■□□□ 1.35
CROCCP3-204ENST00000590118 CDK11AQ9UQ88 783 aaPredicted RBP23.45■■□□□ 1.34
CROCCP3-204ENST00000590118 KDM5CP41229 1560 aa23.44■■□□□ 1.34
CROCCP3-204ENST00000590118 KIF14Q15058 1648 aa23.43■■□□□ 1.34
CROCCP3-204ENST00000590118 PTPRTO14522 1441 aa23.42■■□□□ 1.34
CROCCP3-204ENST00000590118 FMN1Q68DA7 1419 aa23.42■■□□□ 1.34
CROCCP3-204ENST00000590118 MYT1LQ9UL68 1186 aa23.41■■□□□ 1.34
CROCCP3-204ENST00000590118 DIP2CQ9Y2E4 1556 aa23.4■■□□□ 1.34
CROCCP3-204ENST00000590118 ARHGAP5Q13017 1502 aa23.4■■□□□ 1.34
CROCCP3-204ENST00000590118 TROQ12816 1431 aaPredicted RBP23.39■■□□□ 1.33
CROCCP3-204ENST00000590118 REREQ9P2R6 1566 aa23.39■■□□□ 1.33
CROCCP3-204ENST00000590118 C3P01024 1663 aa23.38■■□□□ 1.33
CROCCP3-204ENST00000590118 MLH3Q9UHC1 1453 aa23.36■■□□□ 1.33
CROCCP3-204ENST00000590118 ABCA6Q8N139 1617 aa23.34■■□□□ 1.33
CROCCP3-204ENST00000590118 ARHGAP35Q9NRY4 1499 aa23.34■■□□□ 1.33
CROCCP3-204ENST00000590118 CLIP1P30622 1438 aa23.33■■□□□ 1.33
CROCCP3-204ENST00000590118 TRAPPC8Q9Y2L5 1435 aa23.33■■□□□ 1.33
CROCCP3-204ENST00000590118 SPATA31D1Q6ZQQ2 1576 aa23.33■■□□□ 1.33
CROCCP3-204ENST00000590118 UBTFP17480 764 aaKnown RBP23.33■■□□□ 1.33
CROCCP3-204ENST00000590118 ESF1Q9H501 851 aaKnown RBP23.33■■□□□ 1.33
CROCCP3-204ENST00000590118 CDC42BPBQ9Y5S2 1711 aa23.33■■□□□ 1.32
CROCCP3-204ENST00000590118 LTBP4Q8N2S1 1624 aa23.33■■□□□ 1.32
CROCCP3-204ENST00000590118 AGLP35573 1532 aa23.33■■□□□ 1.32
CROCCP3-204ENST00000590118 EHMT2Q96KQ7 1210 aa23.3■■□□□ 1.32
CROCCP3-204ENST00000590118 IQSEC2Q5JU85 1478 aa23.29■■□□□ 1.32
CROCCP3-204ENST00000590118 LRRIQ1Q96JM4 1722 aa23.28■■□□□ 1.32
CROCCP3-204ENST00000590118 NCOA1Q15788 1441 aa23.28■■□□□ 1.32
CROCCP3-204ENST00000590118 CNTLNQ9NXG0 1405 aa23.25■■□□□ 1.31
CROCCP3-204ENST00000590118 ABCC1P33527 1531 aa23.25■■□□□ 1.31
CROCCP3-204ENST00000590118 PREX2Q70Z35 1606 aa23.24■■□□□ 1.31
CROCCP3-204ENST00000590118 KIDINS220Q9ULH0 1771 aa23.24■■□□□ 1.31
CROCCP3-204ENST00000590118 ITSN2Q9NZM3 1697 aa23.23■■□□□ 1.31
CROCCP3-204ENST00000590118 CAMSAP1Q5T5Y3 1602 aa23.19■■□□□ 1.3
CROCCP3-204ENST00000590118 NPATQ14207 1427 aa23.19■■□□□ 1.3
CROCCP3-204ENST00000590118 ZMYM3Q14202 1370 aa23.16■■□□□ 1.3
CROCCP3-204ENST00000590118 MROH2AA6NES4 1674 aa23.16■■□□□ 1.3
CROCCP3-204ENST00000590118 CDC42BPAQ5VT25 1732 aa23.15■■□□□ 1.3
CROCCP3-204ENST00000590118 NCKAP5LQ9HCH0 1330 aa23.14■■□□□ 1.3
CROCCP3-204ENST00000590118 ZNF335Q9H4Z2 1342 aaPredicted RBP23.13■■□□□ 1.29
CROCCP3-204ENST00000590118 CCDC18Q5T9S5 1454 aa23.13■■□□□ 1.29
CROCCP3-204ENST00000590118 SAMD9LQ8IVG5 1584 aa23.13■■□□□ 1.29
CROCCP3-204ENST00000590118 CASKIN1Q8WXD9 1431 aa23.11■■□□□ 1.29
CROCCP3-204ENST00000590118 UBAP1LF5GYI3 381 aa23.11■■□□□ 1.29
CROCCP3-204ENST00000590118 SUPT6HQ7KZ85 1726 aaKnown RBP23.09■■□□□ 1.29
CROCCP3-204ENST00000590118 ZNF777Q9ULD5 760 aaPredicted RBP23.09■■□□□ 1.29
CROCCP3-204ENST00000590118 SPAG9O60271 1321 aaKnown RBP23.08■■□□□ 1.29
CROCCP3-204ENST00000590118 PKD2Q13563 968 aa23.08■■□□□ 1.29
CROCCP3-204ENST00000590118 PLA2R1Q13018 1463 aa23.07■■□□□ 1.28
CROCCP3-204ENST00000590118 HNRNPMP52272 730 aaKnown RBP eCLIP23.06■■□□□ 1.28
CROCCP3-204ENST00000590118 SYCP2Q9BX26 1530 aa23.06■■□□□ 1.28
CROCCP3-204ENST00000590118 ZNF142P52746 1687 aaPredicted RBP23.06■■□□□ 1.28
CROCCP3-204ENST00000590118 CLTCQ00610 1675 aaKnown RBP23.06■■□□□ 1.28
CROCCP3-204ENST00000590118 MYO3AQ8NEV4 1616 aa23.04■■□□□ 1.28
CROCCP3-204ENST00000590118 TCOF1Q13428 1488 aaKnown RBP23.04■■□□□ 1.28
CROCCP3-204ENST00000590118 PTPRKQ15262 1439 aa23.03■■□□□ 1.28
CROCCP3-204ENST00000590118 GPATCH8Q9UKJ3 1502 aaKnown RBP23.03■■□□□ 1.28
CROCCP3-204ENST00000590118 CEP170BQ9Y4F5 1589 aaPredicted RBP23.02■■□□□ 1.28
CROCCP3-204ENST00000590118 ATP7AQ04656 1500 aa23.02■■□□□ 1.28
CROCCP3-204ENST00000590118 PLXNC1O60486 1568 aa23.01■■□□□ 1.27
CROCCP3-204ENST00000590118 A2MP01023 1474 aa23■■□□□ 1.27
CROCCP3-204ENST00000590118 GGT6Q6P531 493 aa23■■□□□ 1.27
CROCCP3-204ENST00000590118 KIAA1107Q9UPP5 1409 aa22.99■■□□□ 1.27
CROCCP3-204ENST00000590118 PPP6R1Q9UPN7 881 aa22.98■■□□□ 1.27
CROCCP3-204ENST00000590118 FYCO1Q9BQS8 1478 aa22.98■■□□□ 1.27
CROCCP3-204ENST00000590118 INO80Q9ULG1 1556 aaPredicted RBP22.97■■□□□ 1.27
CROCCP3-204ENST00000590118 CFDP1Q9UEE9 299 aaPredicted RBP22.96■■□□□ 1.27
CROCCP3-204ENST00000590118 PLEKHH2Q8IVE3 1493 aa22.96■■□□□ 1.27
CROCCP3-204ENST00000590118 A2ML1A8K2U0 1454 aa22.92■■□□□ 1.26
CROCCP3-204ENST00000590118 CHIC1Q5VXU3 224 aa22.91■■□□□ 1.26
CROCCP3-204ENST00000590118 CCNB3Q8WWL7 1395 aa22.9■■□□□ 1.26
CROCCP3-204ENST00000590118 DNMT1P26358 1616 aaKnown RBP22.9■■□□□ 1.26
CROCCP3-204ENST00000590118 HSPA1LP34931 641 aa22.9■■□□□ 1.26
CROCCP3-204ENST00000590118 ADGBQ8N7X0 1667 aa22.9■■□□□ 1.26
CROCCP3-204ENST00000590118 SCAF1Q9H7N4 1312 aaKnown RBP22.87■■□□□ 1.25
CROCCP3-204ENST00000590118 TOM1O60784 492 aa22.87■■□□□ 1.25
CROCCP3-204ENST00000590118 PIP4K2BP78356 416 aa22.87■■□□□ 1.25
CROCCP3-204ENST00000590118 MED1Q15648 1581 aaPredicted RBP22.86■■□□□ 1.25
CROCCP3-204ENST00000590118 CPS1P31327 1500 aa22.85■■□□□ 1.25
CROCCP3-204ENST00000590118 POLR1AO95602 1720 aaPredicted RBP22.84■■□□□ 1.25
CROCCP3-204ENST00000590118 ZNF644Q9H582 1327 aaPredicted RBP22.83■■□□□ 1.25
CROCCP3-204ENST00000590118 SHANK2Q9UPX8 1470 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms