RNA–Protein interactions for RNA: ENST00000589882.1

TREM1-206, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

Gene TREM1, Length 1,876 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-206ENST00000589882 LRRC9Q6ZRR7 1453 aa15.49■□□□□ 0.07
TREM1-206ENST00000589882 KDM5BQ9UGL1 1544 aa15.49■□□□□ 0.07
TREM1-206ENST00000589882 UACAQ9BZF9 1416 aa15.49■□□□□ 0.07
TREM1-206ENST00000589882 ABCA5Q8WWZ7 1642 aa15.49■□□□□ 0.07
TREM1-206ENST00000589882 CCDC7Q96M83 1385 aa15.49■□□□□ 0.07
TREM1-206ENST00000589882 ARHGAP35Q9NRY4 1499 aa15.48■□□□□ 0.07
TREM1-206ENST00000589882 FAM50AQ14320 339 aaKnown RBP15.47■□□□□ 0.07
TREM1-206ENST00000589882 RRP1P56182 461 aaKnown RBP15.46■□□□□ 0.07
TREM1-206ENST00000589882 TOP2BQ02880 1626 aa15.46■□□□□ 0.06
TREM1-206ENST00000589882 PHLDB1Q86UU1 1377 aa15.45■□□□□ 0.06
TREM1-206ENST00000589882 CALD1Q05682 793 aaKnown RBP15.45■□□□□ 0.06
TREM1-206ENST00000589882 CFTRP13569 1480 aa15.45■□□□□ 0.06
TREM1-206ENST00000589882 FRAT2O75474 233 aaPredicted RBP15.44■□□□□ 0.06
TREM1-206ENST00000589882 FANCD2Q9BXW9 1451 aa15.44■□□□□ 0.06
TREM1-206ENST00000589882 CCDC18Q5T9S5 1454 aa15.44■□□□□ 0.06
TREM1-206ENST00000589882 TPM2P07951 284 aa15.42■□□□□ 0.06
TREM1-206ENST00000589882 RBM10P98175 930 aaKnown RBP15.42■□□□□ 0.06
TREM1-206ENST00000589882 CFAP43Q8NDM7 1665 aa15.41■□□□□ 0.06
TREM1-206ENST00000589882 PDCL3Q9H2J4 239 aa15.41■□□□□ 0.06
TREM1-206ENST00000589882 AAMPQ13685 434 aa15.4■□□□□ 0.06
TREM1-206ENST00000589882 EXOC6Q8TAG9 804 aa15.4■□□□□ 0.06
TREM1-206ENST00000589882 POLR1AO95602 1720 aaPredicted RBP15.4■□□□□ 0.06
TREM1-206ENST00000589882 BIVM-ERCC5R4GMW8 1640 aa15.39■□□□□ 0.05
TREM1-206ENST00000589882 HFM1A2PYH4 1435 aa15.38■□□□□ 0.05
TREM1-206ENST00000589882 FGD1P98174 961 aa15.37■□□□□ 0.05
TREM1-206ENST00000589882 PRDM2Q13029 1718 aa15.37■□□□□ 0.05
TREM1-206ENST00000589882 RCAN3Q9UKA8 241 aa15.35■□□□□ 0.05
TREM1-206ENST00000589882 SLC4A3P48751 1232 aa15.34■□□□□ 0.05
TREM1-206ENST00000589882 PTPN23Q9H3S7 1636 aa15.34■□□□□ 0.05
TREM1-206ENST00000589882 URB2Q14146 1524 aaKnown RBP15.34■□□□□ 0.05
TREM1-206ENST00000589882 FAM161AQ3B820 660 aa15.33■□□□□ 0.05
TREM1-206ENST00000589882 A0A0U1RQG5 324 aaPredicted RBP15.32■□□□□ 0.04
TREM1-206ENST00000589882 POGKQ9P215 609 aa15.32■□□□□ 0.04
TREM1-206ENST00000589882 GOLGA6L3A6NEY3 463 aa15.31■□□□□ 0.04
TREM1-206ENST00000589882 PDE3BQ13370 1112 aa15.31■□□□□ 0.04
TREM1-206ENST00000589882 KTN1Q86UP2 1357 aaKnown RBP15.31■□□□□ 0.04
TREM1-206ENST00000589882 KIF27Q86VH2 1401 aa15.3■□□□□ 0.04
TREM1-206ENST00000589882 FMN1Q68DA7 1419 aa15.3■□□□□ 0.04
TREM1-206ENST00000589882 PDE4CQ08493 712 aa15.29■□□□□ 0.04
TREM1-206ENST00000589882 MAP7D2Q96T17 732 aa15.29■□□□□ 0.04
TREM1-206ENST00000589882 PRDM4Q9UKN5 801 aa15.29■□□□□ 0.04
TREM1-206ENST00000589882 KIF7Q2M1P5 1343 aa15.28■□□□□ 0.04
TREM1-206ENST00000589882 FSD2A1L4K1 749 aa15.27■□□□□ 0.04
TREM1-206ENST00000589882 BECN1Q14457 450 aa15.27■□□□□ 0.04
TREM1-206ENST00000589882 PNISRQ8TF01 805 aaKnown RBP15.27■□□□□ 0.04
TREM1-206ENST00000589882 DHX29Q7Z478 1369 aaKnown RBP15.27■□□□□ 0.03
TREM1-206ENST00000589882 LRPPRCP42704 1394 aaKnown RBP15.26■□□□□ 0.03
TREM1-206ENST00000589882 CENPQQ7L2Z9 268 aaPredicted RBP15.26■□□□□ 0.03
TREM1-206ENST00000589882 ISY1Q9ULR0 285 aaKnown RBP15.26■□□□□ 0.03
TREM1-206ENST00000589882 XRCC6P12956 609 aaKnown RBP eCLIP15.25■□□□□ 0.03
TREM1-206ENST00000589882 HECW1Q76N89 1606 aa15.25■□□□□ 0.03
TREM1-206ENST00000589882 FGD6Q6ZV73 1430 aa15.24■□□□□ 0.03
TREM1-206ENST00000589882 ESPNB1AK53 854 aa15.23■□□□□ 0.03
TREM1-206ENST00000589882 MRE11P49959 708 aa15.23■□□□□ 0.03
TREM1-206ENST00000589882 C8orf34Q49A92 452 aa15.23■□□□□ 0.03
TREM1-206ENST00000589882 TMC1Q8TDI8 760 aa15.23■□□□□ 0.03
TREM1-206ENST00000589882 NAIPQ13075 1403 aa15.23■□□□□ 0.03
TREM1-206ENST00000589882 SPATA31E1Q6ZUB1 1445 aa15.23■□□□□ 0.03
TREM1-206ENST00000589882 MIA2Q96PC5 1412 aa15.23■□□□□ 0.03
TREM1-206ENST00000589882 ARID4BQ4LE39 1312 aaPredicted RBP15.23■□□□□ 0.03
TREM1-206ENST00000589882 KDM2BQ8NHM5 1336 aa15.21■□□□□ 0.03
TREM1-206ENST00000589882 BRD4O60885 1362 aaPredicted RBP15.21■□□□□ 0.03
TREM1-206ENST00000589882 MYOM3Q5VTT5 1437 aa15.2■□□□□ 0.02
TREM1-206ENST00000589882 NCLP19338 710 aaKnown RBP15.2■□□□□ 0.02
TREM1-206ENST00000589882 TERF1P54274 439 aa15.2■□□□□ 0.02
TREM1-206ENST00000589882 FYCO1Q9BQS8 1478 aa15.19■□□□□ 0.02
TREM1-206ENST00000589882 PCF11O94913 1555 aaKnown RBP15.19■□□□□ 0.02
TREM1-206ENST00000589882 SMAP1Q8IYB5 467 aaPredicted RBP15.19■□□□□ 0.02
TREM1-206ENST00000589882 ROCK2O75116 1388 aaKnown RBP15.19■□□□□ 0.02
TREM1-206ENST00000589882 MYH16Q9H6N6 1097 aa15.18■□□□□ 0.02
TREM1-206ENST00000589882 AQRO60306 1485 aaKnown RBP eCLIP15.17■□□□□ 0.02
TREM1-206ENST00000589882 IFT140Q96RY7 1462 aa15.17■□□□□ 0.02
TREM1-206ENST00000589882 MTERF4Q7Z6M4 381 aaKnown RBP15.17■□□□□ 0.02
TREM1-206ENST00000589882 OSCARQ8IYS5 282 aa15.16■□□□□ 0.02
TREM1-206ENST00000589882 TRIM44Q96DX7 344 aaPredicted RBP15.16■□□□□ 0.02
TREM1-206ENST00000589882 CRBNQ96SW2 442 aa15.16■□□□□ 0.02
TREM1-206ENST00000589882 CUX1P39880 1505 aa15.16■□□□□ 0.02
TREM1-206ENST00000589882 TOPBP1Q92547 1522 aa15.16■□□□□ 0.02
TREM1-206ENST00000589882 RGS3P49796 1198 aa15.15■□□□□ 0.02
TREM1-206ENST00000589882 ZNF608Q9ULD9 1512 aaPredicted RBP15.14■□□□□ 0.01
TREM1-206ENST00000589882 INSRP06213 1382 aa15.14■□□□□ 0.01
TREM1-206ENST00000589882 L3MBTL2Q969R5 705 aa15.14■□□□□ 0.01
TREM1-206ENST00000589882 KIF15Q9NS87 1388 aa15.13■□□□□ 0.01
TREM1-206ENST00000589882 PANK2Q9BZ23 570 aa15.13■□□□□ 0.01
TREM1-206ENST00000589882 VIRMAQ69YN4 1812 aaKnown RBP15.13■□□□□ 0.01
TREM1-206ENST00000589882 GCC2Q8IWJ2 1684 aa15.12■□□□□ 0.01
TREM1-206ENST00000589882 PDIA4P13667 645 aaKnown RBP15.12■□□□□ 0.01
TREM1-206ENST00000589882 MYBBP1AQ9BQG0 1328 aaKnown RBP15.12■□□□□ 0.01
TREM1-206ENST00000589882 DNMBPQ6XZF7 1577 aa15.12■□□□□ 0.01
TREM1-206ENST00000589882 PTPRKQ15262 1439 aa15.12■□□□□ 0.01
TREM1-206ENST00000589882 ZMYM4Q5VZL5 1548 aa15.12■□□□□ 0.01
TREM1-206ENST00000589882 RALBP1Q15311 655 aa15.12■□□□□ 0.01
TREM1-206ENST00000589882 PLEKHH2Q8IVE3 1493 aa15.11■□□□□ 0.01
TREM1-206ENST00000589882 EIF4G3O43432 1585 aaKnown RBP15.11■□□□□ 0.01
TREM1-206ENST00000589882 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.11■□□□□ 0.01
TREM1-206ENST00000589882 KIAA1211Q6ZU35 1233 aa15.11■□□□□ 0.01
TREM1-206ENST00000589882 ANTXR1Q9H6X2 564 aa15.11■□□□□ 0.01
TREM1-206ENST00000589882 CASKIN1Q8WXD9 1431 aa15.11■□□□□ 0.01
TREM1-206ENST00000589882 GRPEL1Q9HAV7 217 aa15.1■□□□□ 0.01
TREM1-206ENST00000589882 UTP14CQ5TAP6 766 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms